Anopheles arabiensis: 120904721
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Entry
120904721 CDS
T07381
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aara
Anopheles arabiensis
Pathway
aara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120904721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aara03019
]
120904721
Messenger RNA biogenesis [BR:
aara03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120904721
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120904721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
CNOT1_HEAT
DUF3819
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
120904721
NCBI-ProteinID:
XP_040170893
UniProt:
A0A8W7MQ70
LinkDB
All DBs
Position
3:complement(24513321..24526786)
Genome browser
AA seq
2499 aa
AA seq
DB search
MNQEPFTYALSQIAHLVSNVNKKNSPATARQLAQLVKDFGLEADRHLLRCLFSSIDFGDA
THSAARGYCQARLLATELASLTNKPQLVANVCFAVDNPFPQQKSLKPTSNLLAQISKTLS
CTPIQETALSIALLHSEQPEIVRFAEAHLKNCLTELIESYIDSDSGSNNVEGSLNDVSPE
FLQQILSLISYGRHTALGLTDQTYERFRSQLCRDFPRDRVPLILAPLLYAESSEISAEIL
KLNTHSILQSSIMKTSWTNLVVEVGYSFTATLDDCRNHLLKVGGRDITPQDVAKIVSSMC
LTHESLSESSINLPTPSAFWPQGSGDPSGQKGKDGNGGSSASEVTTWKPEVLVQALKEVV
PALNWKEVCVALDHPEFLLKDRAGLSLLLTIVKMGMQASNMGQTFPVECLYQRWTNVEGQ
LSIISLILKNSDLYSFADHIYTSVSLDLLKTPPETDSKEVACWMSLHLVDVLLYIADHAN
LSEKVMKIFKVPGSLCPDVLFLALLQINPPMTTARQELFTNLVPIFLGNHPNAGTILHHA
WNHSTFNVTLRPIILHAMSDWYMVGEGDQSRLSRILDVAQDLKALSNLLNIRTYMFIIDL
ACLASRREYLKLEKWLADKIRDHGEPFVKTILKFLQRRCPQILGGKYSEEQIPKSSQLPP
ETLITILNCLQACIASCTPEVADMIHSMMQYGMLLNSKSRAQQQQQQQQAPQQQQQQPPP
PGVLRSHRGLEAFGANAMGSQLLPPMVDSLNSLTANIGGLSIGGPGGGNSAFSFNNIIAT
PPSPSRLLPSSSPFPMMPLPPGAAAAAQAGTLSRLQQTPNDKLGAAAAAGAAGIPTQALA
PFTADAPVPVSKEVEDEANSYFQRIYNLPPHPTLSIDEVLDMLQRYKDSPNRHENDVYQC
MLRNLFEEYKFFPQYPDKELQTTAQLFGGMVERNLVTTYVALGLALRCVLDALKKPEGTK
MYYFGITALDRFKNKLHLYPKYCEYVHSIAHFSEFPAHLIEYIEYGSQGQEPPNKTLGPG
PLPPSILQFMPSGAAGRGGPVGNPLYRSNSVTGTSNLTLAGVSTSASAAAAAAAAAAAAA
AGGAGAGTPGKINLSAQLIPPGAAGGGAAGASGGGGAGAGVAGSSGNSGATGGSSGGGQP
PRVKSIANATNIDTLLVATQDREEKIIAPPDAIQDKTAFIFNNLSQINLQQKCEEIKEIL
QKDYYTWLAQYLVLKRASIEVNFHVLYSNFLDALKIPEINRLVTKETFRNIRVLLRSDKG
IANFSDRSLLKNLGHWLGMMTLGRNKPILHLDIDVKSLLVEAYNKGQQELLYVVPFVAKV
LESCAKSKVFKPPNPWTMSIMNVLAELHQEPDLKLNLKFEIEVLCKNLNIDVSDLKPAIY
LKDPERAQNIEYQLSQPKPPKETAAAAVMGGAGVAGLGVGGNVGGGGGGGGGGGVVAVVP
QLPPGAGPDDMGSSGPSSSPANVAMDPALAATGPPEPRFHYSDINIANPSLNAQHIVYHP
TVAILHTQTHLKVIVKSCLERTISEWISLIVDRSVKIASKTTEQIVRKDFALDSDETRMR
RSAHNMARSLVAGMAMITCRDQMVQTIQNNIKVAFAAAVGSAQKEAIIEHAAQQLAMDNI
ELVTAFIQKTAIEKVAIEMDKILAEDFQLRKLARQEGRRYWDAAVLSYHAERMPERIKLN
VGGVSPSQLAVYEEFSRNIPGFLPITERDAAQFAPKMAEMLPFVATPDEIGAIYDELASK
MDTFIKTTRLVPILQLHTNNMEQLLECLIHAHRSLDNLTGCTLLNKAVEGLLEGLINIPD
QIEHVKLYRDIHLRVMRLMQDHRLFGPMWTNKAITRYMLECREELRYNVEAVDLLITSNF
VNMQQFDMMLVQLMDNGNNYVAVVFAMQLLQTFFIDERHNSAITENDLAGTIEMLHRLTA
HPRAPEGLTHLIEMLRANHDPNSFLMDRAIVGPTSYIHAGVAQARSDIDDSPGFLERAEF
LLKDWVTIALSPNTCRDPLKGFSVFVGKMNAHGILKGDEPLTRFFRFATQYCIDLTYRNM
NEPNAKTKIFQFIDAYVRLIALLVKHSGESGSTNTKLNLLNKILGIIIGILLHDQEVHTT
AFQQVGYHRIFAMLFLELTTHDPILENISISVITAFCHTFHILRPSAAPGFCYSWLELIA
HRVFIGRVLAQIPQQKGWHMYSQLLIDLFKYLAPFLRNAELAKPVQHLYKGTLRVLLVLL
HDFPEFLCDYHFAFCDVIPSNCIQMRNLILSPYPRNMRLPDPFTPNLKVDMLNDIGGSPR
ISINYASSIQPVSFKKDLDSYLKARAPVTFLSELRSNLQISNEVGSRYNIPLMNALVLYV
GTQAIAHIRSKNLGPTMSTIIHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTH
YFSCCILYLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDF
VHCAPEIERLFESVAKSCMVTSKSQQQIQNVEPDITECS
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagcctttcacatacgccttatcgcagatcgctcacttagtgtcgaacgtg
aacaagaaaaactccccggccacagcacgtcagctagcgcagctggtgaaggacttcgga
ctagaggccgaccgtcacttgctgcgttgtctgttctcctcgatcgacttcggggacgcc
acacattccgccgccaggggttattgccaggctcgcttactggccacggaactcgcgagc
ctgacaaataaaccgcagctggtcgccaacgtttgcttcgccgtcgacaatccgttcccg
cagcaaaagtccctgaagccgacatcgaacctgctggcacagatctcgaaaacgctctcc
tgtacaccgatccaggaaacggcgctttcgatcgctttgctgcactcggaacagccggag
atagtgcggtttgcggaagcgcaccttaagaactgtctcaccgagctaatcgagagctac
atcgactctgactcgggcagcaacaacgtagagggcagccttaacgacgtatcgcccgag
tttctgcagcagatactgtccctaatctcgtacggccggcacaccgccctcgggcttacc
gaccaaacgtacgagcgcttccggagccagctgtgccgcgactttccgcgtgaccgcgtg
ccgctcatcctagcgccgctgctgtacgcggagagttcggaaatttcggccgaaatattg
aagctcaacacgcacagcatcctgcaatcgtcgatcatgaaaacgtcctggaccaatctg
gtcgtggaggtgggctactcgttcaccgcgacgctcgacgactgccggaaccatctgctg
aaggtgggcgggcgcgacatcacgccccaggatgtggcgaagattgtgtcgtccatgtgc
ttgacgcacgagtcgctgtcggagagtagcatcaatctgccgacgccgagcgccttctgg
ccgcagggcagtggcgatccgtccggccagaagggcaaggatggcaatggggggtcgtcc
gcgtcggaagtcaccacctggaagccggaggtgctggtgcaggcgctgaaggaggtagtg
cctgcccttaactggaaggaggtgtgcgttgcgctggaccatccggagtttctgctgaag
gaccgggccgggctgtcgctgctgctgacgatcgtgaagatgggcatgcaggcgagcaac
atgggccaaaccttcccggtggagtgtctgtatcagcggtggacgaacgtcgaaggtcag
ctgtcgatcatttcgctgatactgaaaaactccgacctgtactcgttcgccgaccacatc
tacactagcgtgtcgctcgatctgctgaagacgccgccggagacggacagcaaggaggtg
gcgtgctggatgtcgctccacctggtggacgtgctgctgtacatcgcggaccatgcgaac
ctgagcgagaaggtgatgaagattttcaaggtgcccggttcgctctgcccggacgtgctg
tttctggcgctgctgcagatcaacccgccgatgacgacggcccggcaggagctgttcacc
aatctggtgccgatcttcctcggcaaccatccgaacgcgggcacgatactgcaccacgcc
tggaaccattccacgttcaacgtgacgctgcgcccgatcatcctgcacgccatgtccgac
tggtacatggtcggggagggcgaccagtcgcggctgtcccgcatcctcgatgtcgcgcag
gacctgaaggcgctgtccaatctgctcaacattcgcacgtacatgttcatcatcgatctg
gcctgcctggcgtcgcgccgcgaatacctcaagctggagaagtggctggcggacaagata
cgcgaccacggcgaaccgttcgtgaagacgatactgaagtttctgcagcgccgctgcccg
caaatcctgggcggcaagtacagcgaggagcagatcccgaagtcgtcccagctgccgccc
gaaacgctcatcaccatactgaactgtttgcaggcatgcatcgcgagctgtacgcccgag
gtggcggacatgatccacagcatgatgcagtacggtatgctgctgaactcgaagtcgcgc
gcccagcagcaacagcagcagcagcaggcgcctcagcagcagcagcagcagccgccgccg
cccggcgtgctccggtcgcaccgcggcctggaagcgttcggggccaatgcgatgggcagc
cagctgctgcccccgatggtggactcgctcaacagcctgaccgcgaacattggcggcctt
agcatcggtggccccggcggcggcaacagtgcgttcagcttcaacaacatcattgcgacg
ccgccgtcgccctcgcgcctgctgccctcgagcagcccgttcccgatgatgccgctgccg
cccggtgcggccgccgctgcccaggccggcacgctcagccggctgcagcaaacgccgaac
gataagctcggggcggcggcggccgccggcgccgccggcattcccacccaggcgctcgcc
ccgttcacggccgacgcaccggtgcccgtctcgaaggaggtggaggacgaggcgaacagc
tacttccagcgcatctacaacctgccgccgcatccgacgctgtcgatcgacgaggtgctg
gacatgctgcagcgctacaaggactcgccgaaccggcacgagaacgacgtgtaccagtgc
atgctgcgcaacctgttcgaggagtataagtttttcccccagtacccggacaaggagctg
cagacgacggcccagctgttcggcggcatggtggagcgcaatctcgtcaccacgtacgtg
gcgctcgggctggcgctgcgctgcgtgctcgatgcgctgaaaaagccggaaggcacgaag
atgtactacttcggcattaccgcgctggaccggttcaagaacaagctgcacctgtacccg
aagtactgcgagtatgtgcactcgatcgcgcactttagcgagttcccggcgcacctgatc
gagtacatcgagtacgggtcgcagggccaggagccgccgaacaaaacgcttggtccgggg
ccgctgccaccgtcgattttgcagttcatgccgagcggggcggccggtcggggtggaccg
gtgggcaatccgctctatcggagcaactccgtcaccggcacgagcaacctcacgctggct
ggtgtttctacgtccgcttcggctgcagctgcagccgcagccgccgccgctgctgctgct
gccggtggggccggtgcgggtacgcctggaaagatcaatctttccgcccagctaatccct
cccggtgcagccggcggtggagcggcaggtgctagcggtggcggtggggcgggtgcaggt
gttgccggctcaagcggcaacagtggtgccactggtggaagcagcggcggtggacaaccg
ccgcgcgtcaaatcgattgcaaacgcaaccaacatcgacacgctgctggtggcgacacag
gaccgggaggagaagatcattgcgccgccggacgccatccaggacaagacggcgttcatc
ttcaacaacctgagccagatcaatctgcagcagaagtgcgaggagatcaaggagatactg
cagaaggattactacacctggctggcgcagtatctcgtgctgaagcgtgcctcgatcgag
gtgaacttccacgtgctgtactcgaactttctcgacgcgctcaagataccggaaatcaac
cggctggtgacgaaggaaacgttccgcaacatccgcgtgctgctgcggtcggacaagggc
attgcgaacttttccgaccgctcgctgctgaagaatctcggccactggctgggcatgatg
acgctcgggcgcaacaagccgatcctgcacctggacattgacgtgaagtcgctgctggtg
gaggcgtacaacaagggccagcaggagctgctgtacgtcgtgccgttcgtggcgaaggtg
ctggaatcgtgcgcgaagagcaaggtgttcaagccaccgaacccgtggacgatgtcgatc
atgaacgtgctggcggagctgcaccaggagccggacctgaagctgaacctgaagttcgaa
attgaggtgctgtgcaagaacctcaacattgacgtcagcgacctcaagccggccatctac
ctgaaggacccggagcgggcgcaaaacatcgagtatcagctgtcgcagccgaaaccaccg
aaggagacggccgccgcggcggtgatgggtggtgcgggcgtggccggactcggtgtcggg
ggtaatgtgggcggcggcggtggtggaggtggtggtggcggtgttgttgccgtcgtgccg
cagcttcctcccggggccggcccggacgatatgggctcgagcggaccgtccagctcgccg
gcaaacgtggcgatggatccggcgctggcagcgaccggtccgccggagccacgcttccac
tactccgacattaacattgcgaacccgagcctgaacgcgcagcacatcgtgtaccatccg
acggtggcgatcctgcacacccaaacgcacctgaaggtgatcgtgaagagctgcctggag
cgcaccatctccgagtggatctcgctgatcgtggatcgcagcgtgaagattgcgtccaaa
acgaccgaacagatcgtgcgcaaggatttcgcgctcgactcggacgagacgcggatgcgc
cggtcggcccacaatatggcgcgcagtctggtggcgggcatggcgatgatcacgtgccgc
gaccagatggtgcagacgattcagaacaacatcaaggtggcgttcgcggccgcggtcggt
agcgcgcagaaggaagcgatcattgagcacgccgcccagcagctggcgatggacaacatt
gagctggtgaccgcgttcatccagaagacggccatcgagaaggtggcgatcgagatggac
aagatactggcggaggacttccagctgcgcaagctggcgcggcaggagggccggcgctac
tgggacgcggccgtactgtcgtaccatgcggaacggatgcccgagcgcatcaagctgaat
gtgggcggcgtgtcgccgagccagctggcagtgtacgaggagttttcgcgcaacattccc
ggcttcctgccgattacggaacgcgatgcggcccagtttgcccccaagatggcggagatg
ctgccattcgttgctacgccggacgagatcggtgcgatctacgatgagctggcgagtaag
atggatacgttcatcaaaacgacacgtctcgtgccgatattgcagcttcacaccaacaac
atggagcagctgctggagtgtttgattcacgcgcaccgttcgctcgacaatctgaccggt
tgcacgctgctgaacaaggcagtcgagggcctgctggaaggtttaatcaacatcccggac
cagatcgagcacgtcaagctgtaccgggacattcatctgcgcgtgatgcgcctgatgcag
gaccatcggctgttcggtccgatgtggacgaacaaagcgatcacgcgctacatgctggag
tgccgggaggagctgcgctacaacgtggaagcggtcgatctgctgattacgtccaacttt
gttaacatgcagcagttcgacatgatgctggtgcagctgatggacaatgggaacaactac
gtggcggtcgtgttcgccatgcagctgctgcagacgttcttcatcgacgagcggcacaat
tcggccatcaccgagaacgatctggccggcacgatcgagatgctgcaccggctgacggcg
cacccgcgcgcaccggaaggtttgacgcacctgatcgagatgctgcgcgccaatcacgat
ccgaactcgttcctgatggatcgtgccatcgttgggccgacctcgtacatccacgcgggt
gtggcccaggcacggtcggacattgacgattcgcccggttttctcgagcgggccgagttc
ctgctcaaggactgggtcacgattgcactgtcgcccaacacgtgccgcgatccgctcaag
ggtttcagtgtgtttgtgggcaagatgaacgcgcacggcatactgaagggcgatgagccg
ctgacgcgcttcttccgcttcgccacgcagtactgcatcgatctgacgtatcgcaacatg
aacgagccgaacgctaaaacgaaaatcttccagtttatcgacgcgtacgttcggctgatt
gcgctgctggtaaagcactccggcgagagtggcagcaccaacacgaagctgaatctgctg
aataagattctcggtatcatcatcggcatactgctgcacgatcaggaggtccacacgacc
gcgttccagcaggtcggctaccatcgcatcttcgccatgctcttcctcgagctgaccacg
cacgatccgatcctggagaacatcagcatcagcgtgatcacggcgttctgccacacgttc
cacatactgcgcccgtccgcggcgcccggcttctgctactcctggctcgagctgattgcg
caccgcgtcttcatcgggcgcgttctcgcccagatcccgcagcagaagggctggcacatg
tactcgcagctcctgatcgacctgttcaagtatctggccccgttcctgcgcaatgccgag
ctagccaagccggtgcagcatctgtacaagggtacgctgcgcgtgctgctggtgctgctg
cacgattttcccgagtttttgtgcgactaccatttcgcgttctgcgacgtcatcccgtca
aactgcatccagatgcgcaacctgatcctgtcgccgtacccgcgcaacatgcgcctgccc
gatccgttcacgccgaacctgaaggtcgatatgctgaatgacattggaggatcgccacgg
atttccatcaactacgcgtcctccattcagccggtaagcttcaagaaggatctcgactcg
tacctgaaggcccgcgcaccggtcaccttcctgtcggagttgcgctccaatctgcagatc
tcgaacgaggtcggctcgcgctacaatattccgctgatgaacgcgctcgtgctgtacgtt
ggcacccaagcaattgctcacattcgatcgaaaaatttgggcccaacaatgtccacgatt
atacacagcgcgcacatggatatcttccaaaacctggcggtcgatctggacacggaggga
cgctacctgttcctgaacgcgatcgccaaccagctgcgctatccgaacagccacacgcac
tacttcagctgctgcatactgtacctgttcgcagaggcaaactcggaagccattcaggaa
caaatcacgcgcgttttgctcgagcgcctgatcgtcaatcgtccgcatccgtggggtctg
ctgatcacgttcatcgagctgatcaagaatccgatctacaagttctgggatcacgatttc
gtgcactgtgcgccagaaattgaacgacttttcgaatcggtggcaaagtcgtgcatggtc
acgagcaagagccagcagcaaattcaaaacgtcgagccggatatcaccgagtgcagctaa
DBGET
integrated database retrieval system
