Agromyces archimandritae: G127AT_04660
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Entry
G127AT_04660 CDS
T08034
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aarc
Agromyces archimandritae
Pathway
aarc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aarc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G127AT_04660 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aarc03021
]
G127AT_04660 (rpoB)
03400 DNA repair and recombination proteins [BR:
aarc03400
]
G127AT_04660 (rpoB)
Enzymes [BR:
aarc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G127AT_04660 (rpoB)
Transcription machinery [BR:
aarc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G127AT_04660 (rpoB)
DNA repair and recombination proteins [BR:
aarc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G127AT_04660 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QTX05512
UniProt:
A0A975IPD0
LinkDB
All DBs
Position
complement(1021015..1024506)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAARNATTPTPKNGRNAKRLSFAKVTDTLTVPDLLALQTESFDWLVGNGAWKARVAEAE
KAGRDDLAQSTGLEEIFEEISPIEDLGETMQLSFTNPELEPPKYTIDECKEKGKTYSAPL
YVNAEFMNHLTGEIKTQTVFMGDFPLMTSRGTFVINGTERVVVSQLVRSPGVYFERTPDK
TSDKDIYSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLTSEEILEEFA
GYESIALTLEKDNILTKEEALKDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGR
YKINNKLGLEAPLSDSVLTVQDIVATIKYLVALHEGKATLPGRRGGKDVEIRLDVDDIDN
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFG
TSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASFARINAFGFIETPYRKVDNGKVTDEIHYLTAMEEEGYIVAQANAPLNKDG
SFQEARVLARQRGGEVDLVPAEEIGYMDVSPRQMVSVGTSLIPFLEHDDANRALMGANMQ
RQAVPLLRSDSPLVGTGMEGYAAIDAGDVVTADKAGVVTEVSADVVTVQLDEGGTQNYYL
RKFDRSNQGTSYNNRVIVSAGERVEVGEVIADGPATDNGELALGKNLLVAFMPWEGYNYE
DAIILSQNLVKDDVLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPDLLADLDERGIIRI
GAEVSPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIGVKV
FDAQDGDDELGSGVNQRVVVYIAQKRKITEGDKLAGRHGNKGVISRILPIEDMPFLADGT
PVDIILNPLGVPGRMNFGQVLEIHLGWAAKQGWNVEGAAEWAKGLPEVARTAEPGTKVAT
PVFDGASEEEIAGLLDSTLPNRDGERLIGSSGKTQLFDGRSGEPFPYPVSVGYMYILKLH
HLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSD
DILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTAVSLRDTDDEA
FRAAEELGINISARFESSNIDEI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcgcaacgcaaccacgcccacccccaagaacggacgcaacgccaagcgt
ctgtcattcgccaaagtcaccgacacgctgacggtcccggatctgctcgcactgcagacc
gagagcttcgactggctcgtcggcaacggcgcctggaaggcgcgtgtcgccgaggccgag
aaggctggccgcgatgacctcgcccagtccaccggactcgaggagatcttcgaagagatc
tccccgatcgaagacctcggcgagaccatgcagctctcgttcacgaaccccgagctcgag
ccgccgaagtacacgatcgacgagtgcaaggagaagggcaagacctactccgctccgctg
tacgtcaacgcggagttcatgaaccacctcaccggtgagatcaagacccagacggtcttc
atgggcgacttcccgctcatgacctcgcggggcaccttcgtcatcaacggcaccgagcgc
gtcgtcgtctcccagctcgtccgttccccgggcgtctacttcgagcgcacgcccgacaag
acgagcgacaaggacatctactcggcccgcgtcatcccgagccgcggcgcgtggctcgaa
ttcgagatcgacaagcgcgaccaggtgggcgtgcgcatcgaccgcaagcgcaagcagtcc
gtcaccgtcttcctgaaggccctcggcctcacctccgaggagatcctcgaggagttcgcc
ggctacgagtcgatcgccctcaccctggagaaggacaacatcctcaccaaggaagaggcg
ctgaaggacatctaccgcaagctccgcccgggcgagcaggtcgccgccgaggccgcgcgt
gcgctcctcgacaacttctacttcaacccgaagcgctacgacctcgccaaggtcggccgc
tacaagatcaacaacaagctcggcctcgaggccccgctcagcgactccgtcctcaccgtg
caggacatcgtcgccacgatcaagtacctcgtcgccctgcacgagggcaaggcgaccctg
ccgggccgccgcggcggcaaggacgtcgagatccgcctcgacgtcgacgacatcgacaac
ttcggcaaccgtcgcatccgcgccgtcggcgagctcatccagaaccaggtccgcaccggc
ctgtcgcgcatggagcgcgtcgtccgcgagcggatgaccacgcaggacatcgaggcgatc
accccgcagaccctgatcaacgtgcgacccgtcgtcgccgcgatcaaggagttcttcggc
acctcgcagctgtcgcagttcatggaccagaacaacccgcttgccggcctcacgcacaag
cgccgcctctcggcgctcggccccggcggcctctcgcgcgaccgcgcgggcgtcgaggtc
cgcgacgtgcacccctcgcactacggccgcatgtgccccatcgagacgccggaaggcccg
aacatcggcctcatcggctcgctcgcgtcgttcgcgcgcatcaacgcgttcggcttcatc
gagacgccgtaccgcaaggtcgacaacggcaaggtcaccgacgagatccactacctcacc
gccatggaggaggagggctacatcgtcgcccaggccaacgcgccgctgaacaaggacggc
tccttccaggaggcccgcgtcctcgcccgtcagcgcggcggcgaggtcgacctcgttccc
gccgaggagatcggctacatggacgtgtcgccgcgccagatggtctcggtcggcacctcg
ctcatcccgttcctcgagcacgacgacgccaaccgcgccctcatgggcgcgaacatgcag
cgccaggccgtgccgctgctgcgcagcgactcgccgctcgtgggcaccggtatggagggc
tacgccgcgatcgacgccggcgacgtcgtcaccgccgacaaggcgggcgtcgtcaccgag
gtctcggccgacgtcgtcaccgtccagctcgacgagggcggcacgcagaactactacctg
cgcaagttcgaccgctccaaccagggcacctcgtacaacaaccgcgtcatcgtctccgcc
ggcgagcgcgtcgaggtcggcgaggtcatcgccgacggccccgcgaccgacaacggcgag
ctcgcgctcggcaagaacctcctcgtggcgttcatgccgtgggagggctacaactacgag
gacgcgatcatcctcagccagaacctggtgaaggacgacgtgctctcctcgatccacatc
gaggagtacgaggtcgacgcccgcgacacgaagctcggcaaggaggagatcacccgcgat
ctccccaacgtcagccccgacctgctggccgacctcgacgagcgcggcatcatccgcatc
ggcgccgaggtcagccccggcgacatcctcgtcggcaaggtcacgccgaagggcgagacc
gagctgagcgccgaggagcgcctgctccgcgcgatcttcaacgagaagagccgcgaggtc
cgcgacacctccctcaaggtgccccacggcgagcagggcacgatcatcggcgtcaaggtc
ttcgacgcgcaggacggcgacgacgagctcggctcgggcgtcaaccagcgcgtggtcgtc
tacatcgcccagaagcgcaagatcaccgagggcgacaagctcgccggccgtcacggcaac
aagggcgtcatctcgcgcatcctcccgatcgaggacatgccgttcctggccgacggaacc
cccgtcgacatcatcctgaacccgctcggcgtgcccggccgcatgaacttcggccaggta
ctggagatccacctcggctgggcggcgaagcagggctggaacgtcgaaggcgcagccgag
tgggccaagggcctgcccgaggtcgcccgcacggccgagcccggcacgaaggtcgccacc
cccgtcttcgacggcgcgagcgaggaggagatcgcgggcctgctcgactcgaccctcccc
aaccgcgacggcgagcgcctcatcggcagctcgggcaagacgcagctcttcgacggccgc
tccggcgagccgttcccgtacccggtctcggtcggctacatgtacatcctgaagctgcac
cacctggtcgacgacaagatccacgcccgctcgaccggcccgtactcgatgatcacccag
cagccgctcggtggaaaggcgcagttcggcggtcagcgcttcggcgagatggaggtgtgg
gcgctcgaggcgtacggcgccgcatacgccctccaggagctcctcacgatcaagtccgac
gacatcctcggccgcgtcaaggtctacgaggcgatcgtcaagggcgagaacatccaggag
cccggcatccccgagtccttcaaggtgctcatgaaggagatgcagtcgctctgcctgaac
gtcgaggtgctctcggccgacggtaccgccgtcagcctccgcgacaccgacgacgaggcc
ttccgcgccgcagaggagctcggcatcaacatctccgcccgcttcgagtcgtcgaacatc
gacgagatctga
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integrated database retrieval system
