Amedibacterium intestinale JCM 30884: Aargi30884_21250
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Entry
Aargi30884_21250 CDS
T06426
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg02020
Two-component system
aarg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Aargi30884_21250
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Aargi30884_21250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aarg03021
]
Aargi30884_21250
Transcription machinery [BR:
aarg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Aargi30884_21250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
DO-GTPase1
HTH_38
LacI
HTH_21
HTH_Tnp_ISL3
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BBK23222
UniProt:
A0A6N4TMC4
LinkDB
All DBs
Position
complement(2139944..2141185)
Genome browser
AA seq
413 aa
AA seq
DB search
MKNVLILKPEIIQKQNYNKSRETSLSMLCMANKDLKLFLYNKASTNPFLSFQTVSDEIIN
YQASAATLSDTILSQLSYLNVELDEDICYYLLSQLDSNGYFRCSMKDLCKQSIYTQKQLE
KVISILQTLDPVGCFCFSLKESLQVQAFACEEAESETAYILCSYLEDLANHNLNHIMEET
QMDVEEIQEGLRFIQSLNPKPASGYASFSQYMEAEASVEVKDGKIQIQLLKQDFTIEIDE
EMQKNKQMQEEYKQLYTEAKNIMNFIQKRNATIMQILQIVCQKQKDYFLHGKALQYCTMQ
QIAKECDVNVSTISRAVTGKMLQFQNRYIPLRYFFVRNGNKEHSQEELVDKIKEYIESEN
PKTPYSDEKLKALLEKEGIYVSRRTIAKYRELAQIENASKRKKRKGEKYERKN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtactgattttaaaaccagaaataatccagaagcaaaattataataagtcc
agagaaacatcgttatctatgttatgtatggcaaataaggatttgaaattgtttttatat
aataaagcaagtactaatccttttttgtcgtttcaaactgtaagcgatgagattataaat
tatcaggcttctgcagcgactttatccgatacgattctttctcagctttcttatttaaat
gtagagttagatgaggatatatgttattacttgttatcacagctagattctaatggatat
tttagatgttccatgaaagatttatgcaagcaaagtatatatactcaaaaacaattagaa
aaagtaatttctattttacagacactagatcctgttggatgtttttgcttttctttaaag
gaatcattacaggtgcaggcttttgcctgtgaagaagcagaaagtgaaacagcatatatt
ttatgttcttatttagaggatttagcaaatcataatcttaatcatattatggaagaaacg
cagatggatgtagaggaaattcaagaaggactccgttttattcaatctttaaatccaaaa
ccggcaagtgggtatgcatctttttcacagtatatggaagcagaagcaagtgttgaagtg
aaagatggaaaaatacaaattcagttattaaaacaagattttactatagaaattgatgaa
gaaatgcagaagaacaaacaaatgcaagaagagtacaaacagttatatacagaagcaaaa
aatattatgaactttatacagaaaagaaatgctacaatcatgcaaattcttcaaatcgta
tgtcaaaaacagaaagattattttttacatggaaaagcattgcagtattgtactatgcag
cagattgcgaaggaatgcgatgtaaatgtttctacaatatccagagcagtaacaggaaaa
atgttacagtttcaaaatcgatatattccattgcgttatttctttgtaagaaatgggaat
aaggagcatagtcaggaagaacttgttgataaaataaaagaatacatagagagtgaaaat
ccaaaaactccatacagtgatgagaaactgaaggcgttgctggagaaagaggggatttat
gtatcgagaagaacgattgcgaaatatagggaattggcacagatagaaaatgcttctaaa
cgaaaaaagagaaagggagaaaaatatgagcgcaaaaattaa
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