Amedibacterium intestinale JCM 30884: Aargi30884_24880 Help Entry Aargi30884_24880  CDS       T06426                                  Name (GenBank) hypothetical protein   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism aarg  Amedibacterium intestinale JCM 30884 Pathway aarg03020   RNA polymerase Brite KEGG Orthology (KO) [BR:aarg00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     Aargi30884_24880  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aarg03021]     Aargi30884_24880    03400 DNA repair and recombination proteins [BR:aarg03400]     Aargi30884_24880 Enzymes [BR:aarg01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      Aargi30884_24880 Transcription machinery [BR:aarg03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      Aargi30884_24880 DNA repair and recombination proteins [BR:aarg03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       Aargi30884_24880 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 Motif Other DBs NCBI-ProteinID:  BBK23585 UniProt:  A0A6N4TMG6 LinkDB All DBs Position 2516267..2520430 Genome browser AA seq 1387 aa AA seqDB search MDKKQPYRIVASGKKAERRDYSKVSGHLELPNLVEIQTDSFAWFKNEGINEVFNEIYPIQ NYGGNIKLKFAGYEFGEPKYNAEESMYRECNYAAPLKARMELEITDNQTGEVINKWEDVF LGDFPLMTETGTFIINGAERVIVSQIVRSPGAYFSTGYDEKTGKESYACELIPSRGTWLE YMSEQKKASSGRILNVSIDRKRKMLSTVLFKAIGMSVDLDRSEDPHDTTQIKTFLNALGR NVIEDVAQDDEDREFMNLYLTLYASYFGKYEELENTLLADKVKTTQEALLSIYENQRSDE IPTLDGSITLMNAKFFDPRRYDLTKAGRFKLRKKLNAINRLTHNRLAMDILDVNDEMFMP SGTLINRDERNTLRGELEKGRYVNAFPFNPLFNYPDAVEVPVSYHLGLIGRVLAEDVELE DTTLYEGTILSEQDVEMLQGKVENITVHGGVIAKKVALTSENAGAVLNYGQRLYALGRIT DENGADLLSEDGETYADGYLPRHKPDPMHVLKVEELKNKVGSGVKAYAWLVGAAVQELFV RTEDGAVVKVIGNDPFANKHTITISDIYALYSYNLNVMEGVGETDDIDMLGNRRIRSVGE LIQNQFRIGLSRMERVVKERMSIAEISTLTPKKLTNIRPLTAAIKEFFSSSQLSQFMDQQ NPLAELTNKRRISALGPGGLTRDRAGFEVRDVHSSHYGRICPIETPEGPNIGLISNLTSY GKINEYGFIQTPYRIVNPDGSVKDEAIYLSADEEADYVIAQANEVVNGQLVNENVVARKA GETIIAKREEVELADVSPKQIVSVATACVPFLENDDASRALMGANMQRQAVPLLKPHSPY VGTGIEYKIAKDSGVGVVAKEDGYVEYVDAQRIIISGDDGQRHEYRLRKFQRSNNGTNIN QSPIVKKGERIDKGDILADGPSMENGELALGQNVTIAYMTWYGYNYEDAIIMSERLVRDD VYTSVHIEEYDIDCRETKLGPEEITRDIPNVSENACRNLDSRGIIMVGAEVAEGDILVGK VTPKGQSEISPEEKLLLAIFGEKSREVRDNSLKVPHGGAGIVHSIRVFKRSEGHDLPPGV NETVKVYIVQKRKISEGDKMAGRHGNKGVISKILPVEDMPYMADGTPIDIMLNPFGVPSR MNIGQVLEIHLGYAAKKLGVKFSTPVFDGINNQELSDIMKEADMTVDGKQVLYDGRTGEP FDERISVGVMYMIKLAHMVDDKLHARATGPYSLVTQQPLGGKAQNGGQRFGEMEVWALEA YGAAHTLQEILTVKSDDIVGRTKTYEAIIKGKDIPEPGIPESFRVLKHELQALAIDVKML DEDGNEVDINKEDTTEPTIVPNLVEEESVREEDVDAINADDEIEESEMEEDMPEDFNEEA FLEEEEA NT seq 4164 nt NT seq  +upstreamnt  +downstreamnt atggacaaaaaacaaccttatcgtattgtcgcttccggtaagaaggcagagcgtcgcgac tattcaaaagtaagtgggcatttggaacttcctaacttggttgaaatccaaactgactct tttgcgtggtttaagaacgaaggaatcaacgaagtatttaacgagatttaccctatccaa aactatggagggaatattaaactgaaatttgctggatatgaattcggtgaaccaaaatac aatgcggaagaatcaatgtaccgcgagtgtaactatgcggctccattgaaagcacgcatg gaacttgaaattacagataaccagacaggagaagttattaataaatgggaagatgttttc ttaggggatttccctttgatgacagaaactggaacatttattattaatggagcagaacgt gtcatcgtttctcagatcgtacgttctccaggggcatatttttctactggatatgatgaa aaaacaggtaaagaatcttatgcatgtgaattaattcctagtcgtggtacatggctggaa tatatgagcgaacagaaaaaagcgtctagcggacgtattttaaatgtgagcattgaccgt aaacgtaaaatgctttctactgttctatttaaagcaatcggtatgtctgtagatcttgac cgcagtgaagatccacatgatactacacagatcaaaacattcctaaatgctttaggaaga aatgttatcgaagatgttgcacaggatgatgaagatcgtgaattcatgaatctatacctt acattatatgcttcatactttggtaaatacgaagagctggaaaacactttgttggctgat aaagtaaaaactacacaggaagcattgctttctatttacgaaaaccagcgttcagatgaa attcctacattagatggatctattactttaatgaatgcgaaattctttgatcctagacgt tatgatttaacaaaggcaggacgttttaaacttcgcaagaaattaaatgcaatcaatcgt ttgacacacaatcgtttggctatggatattttagatgttaatgatgaaatgtttatgcca agtggtacattgatcaatcgtgatgaaagaaatacattacgtggagaattggaaaaaggt cgttatgtaaatgccttcccattcaatccattgtttaactatccagatgcggtagaagta cctgttagctatcatctaggtttaattggacgtgttttagcagaagatgtagaactagaa gatactactttatatgaaggaactattctaagtgagcaggatgttgaaatgctgcagggc aaagtagaaaatattactgttcatggaggagttattgcgaaaaaagtagcgttgacaagt gaaaatgcaggtgctgtattaaattatggacaaagattatatgctttaggaagaatcact gatgaaaatggagcagatttattgagtgaagatggcgaaacttatgcagatggatatctt cctcgtcataaaccagatccaatgcatgttcttaaggttgaagagttaaagaacaaagta ggaagtggtgtaaaagcatatgcttggcttgtaggtgctgctgtacaggaacttttcgta cgtacagaagatggtgctgttgtaaaagtaattggaaacgatccatttgccaataagcac acaattaccatttccgatatttatgcattgtattcctacaatttaaatgttatggaaggc gtaggggaaacagacgatatcgatatgcttggaaatcgtcgtatccgttctgtaggagaa ttgattcagaatcaattccgtatcggtttaagccgtatggaaagagtagttaaggaacgt atgtctattgcggaaatttctactttaactccaaagaaacttacaaatattcgtccattg actgcagctattaaagagttcttctctagttcacagctgtctcagttcatggatcagcaa aacccattggcagaacttacgaacaagcgtcgtatttctgcattgggacctggtggtttg actcgtgatcgtgccggttttgaggttcgtgacgttcacagttctcactatggtcgtatt tgtcctattgaaacacctgaaggaccaaacatcggtttgatttcaaacttgacttcttat gggaaaattaacgaatatggatttattcagacgccatatcgtatcgttaatccagatggt tctgtaaaagatgaagcaatttatttatcagctgatgaagaagcagattatgtaattgca caggccaatgaggttgttaatggacagcttgtaaatgaaaatgtcgtagctcgtaaagcg ggagaaacgatcatcgctaaacgtgaagaagttgaattggccgacgtttcaccaaaacag atcgtatctgtcgcaacagcgtgtgtaccattcttggaaaatgacgatgcttctcgtgcc ttaatgggtgccaacatgcagcgtcaggcagtaccattgttaaaaccacattcaccatat gttggaactggtattgaatataaaattgccaaagactctggtgtaggtgttgtagcaaaa gaagatggatatgttgaatatgtagatgcacagcgcatcattatcagtggcgatgatgga cagcgccatgaatatcgtctacgtaagttccagcgttcaaacaatggaacaaacattaac caaagccctatcgttaagaaaggggaacgtattgacaagggagacattcttgcggatgga ccttctatggaaaacggagaacttgctcttggacaaaacgtaactatcgcttacatgaca tggtatggttataactatgaagatgctatcattatgagcgagcgtttagttcgtgatgac gtatatacatctgttcatattgaagaatatgacattgactgccgtgaaacaaaactagga cctgaagaaattacacgtgatattccaaacgtaagtgaaaatgcgtgtcgtaacttggat agccgtggtattatcatggtcggtgcagaagttgcagaaggagatatcctggttggtaag gttactccaaaaggacagagtgaaatttcaccagaagaaaaactgctgcttgcaattttt ggagaaaaatcacgtgaagttcgtgacaattccttaaaagtaccacatggtggggctggt atcgttcattctattcgtgtatttaaacgaagcgaagggcatgatcttccacctggggta aatgaaactgttaaagtttatatcgttcagaaacgtaagatttctgaaggggataaaatg gcaggacgtcatggtaacaaaggggttatctctaaaatcttgcctgtagaggatatgcca tatatggcagatggaacaccaattgatatcatgttgaacccatttggtgtgccttctcgt atgaacatcggacaggtattggaaatccacttaggttatgcggctaagaaactgggtgtt aaattctctactccagtattcgatggtatcaataaccaggaattaagtgatatcatgaaa gaagcagatatgacagttgatggaaaacaggtactgtatgatggacgtacaggggaacca ttcgatgaacgtatttctgttggggtcatgtatatgatcaagctggcacacatggttgat gataaacttcatgctcgtgctacaggaccttattctttagtaactcagcagccattaggt ggtaaagcacaaaatggtggtcagagatttggagagatggaggtttgggcattagaagca tatggtgctgctcatactttacaggaaatcttgactgtaaaatctgatgatatcgtaggt cgtacaaaaacttatgaagctatcattaaaggaaaagatattccagaaccaggaattcca gaatcattccgtgtattgaaacacgaattgcaggctttagcaattgatgtgaaaatgctg gatgaggatggaaatgaagtagatattaataaagaagacactacagaacctacaattgtt cctaatttggtagaggaagaatctgtacgtgaagaagatgtagatgcaattaacgctgat gatgaaatagaagaatctgaaatggaagaagatatgccagaagatttcaatgaagaagcg tttttagaagaagaggaggcgtag

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