Paenarthrobacter aurescens: AAur_2957
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Entry
AAur_2957 CDS
T00447
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aau
Paenarthrobacter aurescens
Pathway
aau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAur_2957 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aau03021
]
AAur_2957 (rpoB)
03400 DNA repair and recombination proteins [BR:
aau03400
]
AAur_2957 (rpoB)
Enzymes [BR:
aau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAur_2957 (rpoB)
Transcription machinery [BR:
aau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAur_2957 (rpoB)
DNA repair and recombination proteins [BR:
aau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAur_2957 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ABM06631
UniProt:
A1R8V4
LinkDB
All DBs
Position
complement(3237578..3241099)
Genome browser
AA seq
1173 aa
AA seq
DB search
MEGSLLVASSTSNNETANTASTDGATRRLSFAKIHEPLDVPNLLALQTDSFDWLVGNERW
QARVAKAVEEGDLSVATTSGLADIFEEISPIEDFQGTMSLSFSEPEFADPKYTMAECKDR
DATYSAPLYVKAEFMNNNTGEIKQQTVFMGDFPLMTEKGTFVVNGTERVVVSQLVRSPGA
YFERTADKTSDKDIFTAKIIPSRGAWFELEIDKRDQVGVRLDRKRKQSVTVLLKALGWTE
GQILEEFGQYDSMRATLEKDATETREDALLDIYRKLRPGEPPTVEAAQSLLDNLYFNAKR
YDLAKVGRYKINRKLGIDRSLGDKEASVLHVEDIVAMIKFLVALHAGEKTLMGKRDGEDH
ELRVDVDDIDHFGNRRIRAVGELIENQVRTGLSRMERVVRERMTTQDVEAITPQTLINIR
PVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYG
RMCPIETPEGPNIGLIGSLASYGRINPFGFIETPYRLVSEGVVSDEVQYLTADDEAEVLI
AQANAPLDADKKFSEETVLVRARGGGGEPVLVPAADVQFMDVSPRQMVSVATALIPFLEH
DDANRALMGANMQRQAVPLVRSEAPFVGTGMERAAAVDAGDVVIAKKAGVVTEVSAELVV
MINDDGTETNYRINKFARSNQGNCYNHRVLVNEGQRLEVGGIIADGPATDQGELALGKNL
LVAFMSWEGHNFEDAIILSQRIVAEDVLSSIHIEEHEIDARDTKLGAEEITRDIPNVSEE
VLAGLDERGIIHIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLKV
PHGESGTVIGVRVFDRDNDDELPPGVNQLVRVYVAAKRKITDGDKLAGRHGNKGVISKIL
PIEDMPFLADGTPVDIVLNPLGVPGRMNVGQVLETHLGWVAKTGWKIEGEPEWVKNLPNL
PRETGQTTVATPVFDGAREEEITGLLDSTNVTRDGDRLIDSSGKTRLFDGRSGEPFPDPI
SVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQELLTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSTDGT
TIEMRDSDDAVFTAAEELGIDLSRAEPSSVEEV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggatccctcttggtcgcctcgagcacctctaataacgaaaccgctaacacggca
agcaccgatggtgccacccgccgcctctcattcgcaaagattcacgaaccgcttgacgtt
ccgaatcttctcgccctgcagacagacagctttgactggctggtcggaaacgaacgctgg
caggcgcgggtagcgaaggctgtcgaggagggcgacctcagcgtcgccactacctccgga
cttgccgacatcttcgaagagatctccccaatcgaggatttccagggcaccatgtccctg
agcttctccgagccggagttcgctgacccgaagtacaccatggccgaatgcaaagaccgt
gacgccacttactcggccccgctttatgtcaaggccgagttcatgaacaacaacacgggc
gaaatcaagcagcagaccgtgttcatgggcgacttccccctcatgactgaaaagggaacg
ttcgtcgtcaacggcaccgagcgcgtcgttgtctcccagctggtccgttcaccgggcgcc
tactttgagcgcaccgctgacaagaccagtgacaaggacatcttcaccgcgaagatcatc
ccgtcccgtggtgcatggtttgaactcgaaatcgacaagcgcgaccaggtcggcgtacgc
ctcgaccgcaagcgcaagcagtcggtcaccgttctcctgaaggccctcggctggaccgaa
ggccagatcctggaagagttcggccagtacgactccatgcgtgcaacgctggagaaggac
gccaccgaaacccgcgaagacgcgcttttggatatctaccgcaagctgcgtccgggcgag
ccgcccacagttgaggctgcccagtccctgctggacaacctgtacttcaacgccaagcgc
tacgatcttgccaaggttggccgttacaagatcaaccgcaagctcggcatcgaccgctcc
cttggtgacaaggaagcttcggtcctgcacgttgaagacatcgttgccatgatcaagttc
ctcgttgcgcttcacgccggcgagaagaccctcatgggcaagcgcgacggcgaagaccac
gagctccgcgtcgacgtcgacgacatcgaccacttcggcaaccgtcgcatccgcgccgtg
ggcgaactgatcgaaaaccaggtccgcacaggtctttcccgcatggaacgcgtcgtccgc
gaacgcatgaccacgcaggatgtcgaggccatcacgccgcagacactgatcaacatccgt
cccgttgtggcagccatcaaggagttcttcggaacgtcccagctgtcgcagttcatggac
cagaacaacccgctgtcgggtctgacccacaagcgccgcctgtcggcacttggcccgggt
ggtctgtcccgtgaccgtgcaggcatggaagttcgagacgttcacccgtcccactacgga
cgtatgtgccccatcgaaacccctgaaggcccgaacattggtctgatcggttcgctggca
tcttacggccgcatcaacccgttcggcttcatcgagacgccgtaccgcctggtttccgag
ggcgtcgtttccgatgaggtccagtacctcactgctgacgacgaagcagaggtcctgatc
gcacaggccaacgctcccctggatgctgacaagaagttctccgaagagaccgtccttgtc
cgtgcccgtggtggtggaggcgagcccgttctggttcccgccgcagacgttcagttcatg
gacgtttccccgcgccagatggtgtccgtggcaacggccctgatcccgttccttgagcat
gacgatgccaaccgtgcactcatgggtgccaacatgcagcgccaggccgtgccgctggtc
cgttccgaggctcctttcgtgggcaccggcatggagcgcgcagcagccgtcgacgccggt
gacgttgtcatcgcgaagaaggcaggtgtggtcaccgaggtttccgccgagctcgttgtc
atgatcaacgacgacggtactgagaccaactaccgcatcaacaagttcgcccgctccaac
cagggcaactgctacaaccaccgtgtcctggtcaacgaaggccagcgcctggaagttggc
ggcatcatcgctgatggtcccgcaacggaccagggtgagctcgccctcggtaagaacctg
ctcgtggcattcatgtcatgggaaggccacaacttcgaggacgccatcatcctctcccag
cgcattgttgctgaggatgtcctttcctccattcacatcgaggagcacgaaattgatgcc
cgcgacaccaagcttggtgccgaggaaatcactcgtgacatccccaacgtgtccgaggaa
gtccttgcaggcctggacgagcgcggcatcatccacatcggtgccgaggttgaagccggc
gacatcctggtcggaaaggtcacccctaagggtgaaaccgaactgaccccggaagagcgc
cttctccgcgccatcttcggtgagaagtcccgcgaagtccgcgacacctccttgaaggtg
ccccacggcgagtccggtacggtcatcggcgtgcgcgtcttcgaccgcgacaacgacgac
gagctgcccccgggcgtgaaccagctggtccgcgtctacgttgcagccaagcgtaagatc
accgacggcgacaagctcgccggccgtcacggcaacaagggtgttatctccaagatcctt
ccgatcgaggacatgcccttccttgcagacggtaccccggtggacatcgtcctgaacccg
cttggtgttccgggtcgaatgaacgttggacaggttctggaaacccaccttggttgggtt
gccaagaccggttggaagatcgaaggcgagccggagtgggtcaagaacctcccgaacctg
ccccgtgaaaccggccagaccaccgttgccacaccggtgttcgatggcgcccgcgaagaa
gaaatcacgggcctgcttgactccaccaacgtgacccgcgatggcgaccgcctgattgac
tcctccggcaagacccgtctgttcgacggccgctccggcgagccgttcccggacccgatc
tccgtcggttacatgtacatcctgaagctccaccacttggtggacgacaagatccacgcg
cgctccaccggcccgtactccatgatcacgcagcagccgctgggtggtaaggctcagttc
ggtggccagcgcttcggtgaaatggaagtgtgggcgctcgaagcttacggtgccgcttac
acccttcaggaactcctcacgatcaagtcggatgacatccatggtcgtgtgaaggtctac
gaagccatcgtcaagggcgagaacatccctgagcctggcgttcccgagtccttcaaggtc
ttgatcaaggaaatgcagtcgttgtgcctgaacgtggaagttctttccactgacggaacc
acgatcgaaatgcgtgactctgatgacgcagtcttcacggctgcggaagaactgggcatc
gatctgtctcgtgcagagcccagttccgtagaagaggtctag
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