Actinokineospora auranticolor: V5P93_006836
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Entry
V5P93_006836 CDS
T10991
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aaur Actinokineospora auranticolor
Pathway
aaur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V5P93_006836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaur03021
]
V5P93_006836
03400 DNA repair and recombination proteins [BR:
aaur03400
]
V5P93_006836
Enzymes [BR:
aaur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V5P93_006836
Transcription machinery [BR:
aaur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V5P93_006836
DNA repair and recombination proteins [BR:
aaur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V5P93_006836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
XGP79252
LinkDB
All DBs
Position
complement(7869243..7872746)
Genome browser
AA seq
1167 aa
AA seq
DB search
MAVSRATKATAATNSTPSNSGIPGAPRRVSFAKIREPLGTPNLLDLQIQSFEWFTGAEAW
FQRRVDAGDENPVGGLEEVLNEISPIEDFSGSMSLSFSDPRFDEVKASVEECKDKDMTYA
APLFVTAEFTNNTTGEIKSQTVFMGDFPVMTNKGTFVINGTERVVVSQLVRSPGVYFDTA
IDKTTDKDVFSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEAIRE
RFSFSETLIATLEKDHTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKDKRYDLAK
VGRYKVNKKLGLRLPTDVGVLTEDDIVTTIEYLVRLHAGDTTMTVGKGEDAVEVPVEVDD
IDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKE
FFGTSQLSQFMDQTNPVAGLTHKRRLSALGPGGLSRERAGMEVRDVHHSHYGRMCPIETP
EGPNIGLIGSLSSYARVNPFGFIETPYRKVVEGQVTDQIDYLTADEEDRHVIAQANAPLD
DQNHFAEERVLVRKKGGDVEFIEPFDVDYMDVSPRQMVSVATAMIPFLEHDAANRALMGA
NMQRQAVPLLRSESPLVGTGMELRAAVDGGDLVVAAKAGVIEELSADFITVMADDGTRQT
YGMHKFRRSNQGTCINQKPIVGEGDRVEAGQVIADGPCTEDGEMALGKNLLVAIMPWEGH
NYEDAIILSQRLVQDDVLTSIHIDEHEIDARDTKLGAEEITRDIPNVSEEVLADLDERGI
IRIGAEVGAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIG
IRVFSREDEDELPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPVEDMPFLAD
GTPVDVVLNTHGVPRRMNIGQILESHLGWIAKQGWQIEGNPEWASMLPEDLHDVEPDTNT
ATPVFDGVRENELSGLLASTRPNRDGERMVKEDGKATLFDGRSGEPYPYPVSVGYMYILK
LLHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIK
SDDVVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDD
EDLERAAANLGINLSRNESPSVDDVVN
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgcgcgaccaaggccactgctgcgaccaactccaccccctcgaactcg
ggcatcccgggcgccccgcgccgggtctccttcgcgaagatccgcgagcccctgggcacc
cccaacctgctggacctgcagatccagtcgttcgagtggttcaccggcgccgaggcgtgg
ttccagcgccgcgtcgacgcaggcgacgagaaccccgtcggtggccttgaggaagtcctc
aacgagatctcgccgatcgaggacttctccggttccatgtcgctctccttctccgacccg
cgcttcgacgaggtcaaggcctcggtcgaggagtgcaaggacaaggacatgacctacgcg
gcgccgctgttcgtcaccgcggagttcaccaacaacaccaccggcgagatcaagagccag
accgtcttcatgggcgacttcccggtgatgacgaacaagggcacgttcgtcatcaacggc
accgagcgggtcgtggtctcgcagctggtgcgctccccgggcgtctacttcgacaccgcg
atcgacaagaccaccgacaaggacgtcttcagcgtcaaggtcatcccgagccgcggcgcg
tggctggagttcgacgtcgacaagcgcgacaccgtcggcgtgcgcatcgaccgcaagcgc
cgccagccggtcaccgtgctgctcaaggcgctcggctggaccaccgaggccatccgcgag
cgcttctccttctccgagacgctgatcgcgaccctcgagaaggaccacaccgcgggcacc
gacgaggcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccgaccaaggag
tccgcgcagaccctgctggagaacctgttcttcaaggacaagcgctacgacctggccaag
gtcggccgctacaaggtcaacaagaagctcggcctgcggctgcccaccgacgtcggcgtg
ctcaccgaggacgacatcgtcaccaccatcgagtacctggtgcgcctgcacgccggtgac
accacgatgaccgtgggcaagggcgaggacgccgtcgaggtgccggtcgaggtcgacgac
atcgaccacttcggcaaccgccgcctgcgcaccgtcggcgagctgatccagaaccagatc
cgggtcggcctctcccgcatggagcgcgtcgtccgcgagcggatgaccacccaggacgtc
gaggcgatcaccccgcagaccctgatcaacatccggcccgtggtggccgcgatcaaggag
ttcttcggcacctcgcagctctcgcagttcatggaccagaccaacccggtcgccggtctg
acccacaagcgccgcctctcggcgctgggtcccggcggtctgtcccgcgagcgcgcgggc
atggaggtccgcgacgtccaccacagccactacggccgcatgtgcccgatcgagaccccg
gaaggcccgaacatcggcctgatcggctcgctgtcgagctacgcgcgggtcaacccgttc
ggcttcatcgagacgccgtaccgcaaggtcgtcgagggccaggtcaccgaccagatcgac
tacctgaccgcggacgaggaggaccggcacgtcatcgcgcaggccaacgcgccgctcgac
gaccagaaccacttcgccgaggagcgcgtgctcgtccgcaagaagggcggggacgtcgag
ttcatcgagcccttcgacgtggactacatggacgtctcgccgcggcagatggtctcggtc
gccaccgcgatgatcccgttcctcgagcacgacgcggccaaccgcgcgctcatgggcgcg
aacatgcagcgccaggccgtgccgctgctgcgcagcgagtccccgctggtgggcaccggc
atggagctgcgcgccgcggtcgacggcggcgacctggtcgtcgcggccaaggccggtgtg
atcgaggagctgtccgcggacttcatcaccgtgatggccgacgacggcacccgccagacc
tacggcatgcacaagttccgccgctccaaccagggcacctgcatcaaccagaagcccatc
gtcggtgagggcgaccgggtcgaggcgggtcaggtcatcgccgacgggccgtgcaccgaa
gacggcgagatggccctgggcaagaacctgctcgtggcgatcatgccgtgggagggccac
aactacgaggacgcgatcatcctgtcgcagcgcctcgtgcaggacgacgtgctcacctcg
atccacatcgacgagcacgagatcgacgcgcgggacaccaagctcggcgccgaggagatc
acccgggacatcccgaacgtctccgaggaggtcctggcggacctggacgagcgcggcatc
atccggatcggcgccgaggtcggcgcgggcgacatcctggtcggcaaggtcaccccgaag
ggcgagaccgagctgaccccggaggagcggctgctgcgcgcgatcttcggcgagaaggcc
cgcgaggtccgcgacacctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggc
atccgggtgttctcccgcgaggacgaggacgagctgccccccggcgtcaacgagctggtc
cgggtctacgtggcgcagaagcgcaagatccaggacggcgacaagctcgcgggccgccac
ggcaacaagggcgtcatcggcaagatcctccccgtggaggacatgccgttcctcgccgac
ggcacccccgtcgacgtcgtgctgaacacccacggtgtgccccgacggatgaacatcggc
cagatcctggagtcccacctcgggtggatcgccaagcagggctggcagatcgagggcaac
ccggagtgggcgagcatgctccccgaggacctgcacgacgtggagcccgacacgaacacc
gccaccccggtgttcgacggcgtccgggagaacgagctgtccggcctgctggcctcgacc
cgccccaaccgggacggcgagcgcatggtcaaggaggacggcaaggcgacgctgttcgac
ggccgcagcggcgagccgtacccgtacccggtctcggtcggctacatgtacatcctcaag
ctgctgcacctggtcgacgacaagatccacgcccgctcgaccggcccgtactcgatgatc
acccagcagccgctcggcggtaaggcccagttcggtggccagcgcttcggtgagatggag
tgctgggcgatgcaggcctacggcgcggcctacacgctgcaggaactgctgacgatcaag
tccgacgacgtggtcggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatc
cccgagccgggcatccccgagtcgttcaaggtgctcctcaaggagctccagtcgctgtgc
ctgaacgtggaggtgctgtccagcgacggcgccgccatcgagatgcgcgacggggacgac
gaggacctggagcgcgccgccgccaacctgggcatcaacctgtcccgcaacgaatccccg
tctgtggacgacgtcgtcaattga
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