Alteromonas stellipolaris R10SW13: AVL56_06440
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Entry
AVL56_06440 CDS
T04403
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw03030
DNA replication
aaw03430
Mismatch repair
aaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL56_06440
03430 Mismatch repair
AVL56_06440
03440 Homologous recombination
AVL56_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaw03032
]
AVL56_06440
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_06440
Enzymes [BR:
aaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL56_06440
DNA replication proteins [BR:
aaw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVL56_06440
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVL56_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF4388
Motif
Other DBs
NCBI-ProteinID:
AMJ93981
LinkDB
All DBs
Position
1506355..1507383
Genome browser
AA seq
342 aa
AA seq
DB search
MQLYPNQFPSEIGKGLASCYLVFGDEPQQKFEVIEQIRTTAKANGFDERTVLVADTGFSW
NQLLEATQSMSLFSNQQFIELELPTGKPGAEGSKMLQEVAKGLTRDTLLLIHGPKIGKDV
QRGKWFKVLDEMGVSVLCYPLEGRQLTAWLSNQVKQHQLTINAAGMKMIADFCEGNLLAA
KQEIDKLALLYPQQPVSEAQIERAMVDQSRYNVFQLVDVMLSGDANRCVKMLYRLESEGL
EPNIIIWALIREWEVLWKLKSAAANGEAIQWQKFGIWRNRQGFYQSALNRLSIEQLLQIQ
DALTQADLAFKQNVISRPFVKLCHLCMMFMAMGIFHLPLMEA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcaactctacccaaaccaatttcccagcgagataggtaaaggattagcatcctgttac
ttggtatttggtgatgagcctcagcaaaaatttgaggtgatagagcaaatccgtaccacg
gcaaaagccaatggttttgatgagcgcacagtgcttgtggccgacaccggtttttcatgg
aatcagctacttgaagcaacacaaagcatgtcgttgttttcaaaccaacagtttattgaa
ttagaacttcccacaggcaagcccggcgctgaaggcagcaaaatgctgcaagaagtcgcc
aaagggttaacccgagacaccttgctgctaattcacggcccaaaaattggcaaagatgtt
cagcgtggcaagtggtttaaagtactcgatgaaatgggcgtttctgttctgtgctatccc
ttagaaggtagacaactcactgcatggctgagcaatcaagtaaaacaacatcagctgact
attaatgctgctggaatgaaaatgattgccgatttttgcgaagggaatctattagcagca
aaacaagaaattgataaacttgccctactttacccgcagcagcctgtgtctgaagcgcaa
attgagcgagcgatggtcgaccaatctcgctacaacgtgtttcagttagtggatgttatg
ctaagcggcgacgccaatcgctgcgtgaaaatgctttaccgcctagaaagtgaaggacta
gagccaaacattattatttgggcgctcattcgtgagtgggaggtattatggaaattgaaa
agtgctgccgctaatggtgaagcaattcaatggcaaaagtttggcatttggcgtaacagg
caaggcttctatcaaagtgcgttaaatcgccttagcatagagcagctactacaaattcag
gatgcccttacccaggcagatttagcgtttaaacaaaatgttatttcacgccccttcgta
aagctttgccatttatgcatgatgtttatggcaatgggtatttttcaccttcctttgatg
gaagcttaa
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