Candidatus Koribacter versatilis: Acid345_2832
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Entry
Acid345_2832 CDS
T00352
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT
KO
K18139
outer membrane protein, multidrug efflux system
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba01501
beta-Lactam resistance
aba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Acid345_2832
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Acid345_2832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aba02000
]
Acid345_2832
01504 Antimicrobial resistance genes [BR:
aba01504
]
Acid345_2832
Transporters [BR:
aba02000
]
Other transporters
Pores ion channels [TC:
1
]
Acid345_2832
Antimicrobial resistance genes [BR:
aba01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Acid345_2832
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Acid345_2832
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Acid345_2832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HH_AprE
AUDH_Cupin
Motif
Other DBs
NCBI-ProteinID:
ABF41833
UniProt:
Q1IMR7
LinkDB
All DBs
Position
3368630..3370192
Genome browser
AA seq
520 aa
AA seq
DB search
MNFKFRKIATTLPLLAMACLSACVVGPKYHKPAVDAPPSYKEATPSAQSAQPAPGAPAPT
WQPASPNDAMLKGKWWEIYNDADLNKLEEEVNVSNQSVKAAEASFLGARALVKQARAAYF
PTIGVSPSITATRQLSVDSNGKVTGGTGTDFDFPANAAWVPDIWGKVRNQVRAQASAAQM
SAADLENIRLSLQVEVANNYFQLRSQDALKDLLDATVKAYQESVDLTQALYETGIDSQES
VLQAETQLATAQAQDTNVGILRAQYEHAIAMLIGKPASQFSLAHLPLSSEPPSIPIGVPS
NLLERRPDIASAERSMEQSNALIGVAVAAYYPNVTLSGTFGFRNTSIADWFTWPSHYWSV
GPQLAQTIFEGGLRKATVVQAQAQYDQSVANYRQTVLTAFQQVEDNLAALRILSQEVQQQ
AAAVDFAQKNLNLAIDRYKLGIDPYLNVLTAQTTLFSNQQGLVQLKLQQMNASAQLIEAL
GGGWDTSLLPSKKDVQSLGPVQTNPAPPSQSGQNQTPPTR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaagtttcgaaagattgcaactacgctgccgctgctggccatggcctgcctg
tcggcgtgcgtagtgggaccgaagtatcacaagccggccgtggacgctccgccgtcttac
aaagaagccacaccatcagcgcaaagcgcacagccggctccgggtgcacctgctccgacg
tggcaacccgccagccccaacgacgcgatgctcaagggcaagtggtgggaaatttataac
gacgccgacttgaataagctcgaagaagaagtcaacgtctcgaaccaaagcgtcaaggct
gcggaggcaagctttctcggagcacgtgcactggtaaaacaagcgcgagcagcgtacttc
cctacaatcggcgtctcgccgagcatcaccgcaacccgtcagctttcggttgatagcaac
ggtaaggtgaccggcggtaccggcacggatttcgatttccccgccaacgcagcctgggtc
ccggatatttggggcaaagttcgtaaccaggttcgcgcgcaagcttccgcggcacagatg
agcgcagcggatttagagaacatccgcctctccctccaggtcgaagtcgccaacaactac
ttccagttgcgttcgcaagatgccttgaaagatctgctcgacgcaacggtcaaggcgtat
caggaatctgtcgacttgacgcaagcgctgtacgagacgggtatcgactcgcaggaatca
gtgctgcaagccgagacgcagttagccaccgctcaggcgcaagacacgaacgttggcatc
ctgcgcgcgcagtatgaacatgccatcgcgatgctgatcggcaaaccagcttcacagttt
tccctggcacatctgccgctgagttctgagcctccgtcaattcccatcggagttccctcg
aacctgctcgagcggcggcctgacattgcctccgcggaacgcagcatggagcagtcgaat
gcgttgatcggggtggcagtcgcagcgtattacccgaacgtcaccctcagcggcacattt
ggcttccgcaatacgtcaatcgccgattggttcacctggccgagccactattggtctgtt
ggtccgcagttggcgcagacaatttttgaaggcggcctgcgcaaggccacagttgtccag
gcccaggcgcaatacgatcagtcggtcgccaactatcgtcaaaccgtgctcaccgctttt
cagcaggtggaagacaatctcgcagcgctgcggattctctcgcaggaagtgcagcagcaa
gcggcggcagtggacttcgcgcagaagaacctgaacctggcgatcgatcgctacaagctg
ggcatcgatccgtacctgaacgtgctcacggcgcagacgacgctgttctccaatcagcag
ggcctggtgcaactcaagctgcagcagatgaacgccagtgcgcagctgattgaggcgctc
ggcggaggttgggacacttctctgctaccgtcgaagaaggacgtgcaatcgctcggtccg
gtgcaaaccaacccggcaccacccagccaatctgggcaaaaccagacgcccccgacacgc
taa
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