Amycolatopsis bartoniae: AMYBAR_002886
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Entry
AMYBAR_002886 CDS
T10755
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
abar Amycolatopsis bartoniae
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
abar03051
]
AMYBAR_002886 (pafA)
Enzymes [BR:
abar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
AMYBAR_002886 (pafA)
Proteasome [BR:
abar03051
]
Prokaryotic proteasome
Bacterial regulatory particles
AMYBAR_002886 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
XMG33994
LinkDB
All DBs
Position
2986138..2987496
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AA seq
452 aa
AA seq
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MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLVQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTLLKVGTAHLVLEMIEQGVQF
RDFTLDNPIRAIREISHDLTGRRPVRLAGGREASALDIQREYYGRAVQHVKANDSGPVAE
RVIELWGRALDAVEQQDFSKIDTEIDWAIKHRLVERYRDKHNLDLSSPRVAQLDLAYHDI
RRGRGIFDLLQRKGLVRRITDDGEIELAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRAVDERVDRLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatttttggcatcgagaccgagttcggggtcacgtgcaccttccacggg
cagcgccggctctcgccggacgaggtcgcccggtacctgttccggcgggtcgtgtcgtgg
gggcgctcctccaacgtgttcctgtccaacggctcccggctctacctggacgtgggctcg
cacccggagtacgcgacggccgaatgcgacgacctggtgcagctggtcacccacgacaag
gccggggagcgcatcctcgaggacctgctcgtggatgccgagcggcggctcgccgacgag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactccgcgggcaactcctac
ggctgccacgagaactacctggtcacccgtgcgggtgagttctcgcggatcgcggatgtg
ctgctgccctttctggtgacccggcagctcatctgcggcgcgggcaaggtcctgcagacc
ccgcgtggcgccgtgtactgcctgtcccagcgggcggagcacatctgggagggcgtctcc
agcgccaccacgcgctcgcggccgatcatcaacacgcgcgacgagccgcacgccgacgcc
gagcggtaccggcggctgcacgtcatcgtgggcgactcgaacatggccgagccgaccacg
ctgctcaaggtcggcaccgcgcacctggtgctggagatgatcgagcagggcgtgcagttc
cgggacttcacgctggacaacccgatccgcgcgatccgggagatcagccacgacctgacc
gggcgccgcccggtgcggctggccggtggccgggaggcgtcggcgctggacatccagcgc
gagtactacggccgcgcggtgcagcacgtgaaggccaacgactccggcccggtcgccgag
cgcgtgatcgagctgtggggccgggcgctggacgcggtcgagcagcaggacttctcgaag
atcgacaccgagatcgactgggcgatcaagcaccggctggtggagcgctaccgcgacaag
cacaacctggacctgtccagcccgcgggtggcgcagctcgatctggcctaccacgacatc
cgccgtggccggggcatcttcgacctgctgcagcgcaagggcctggtgcggcgcatcacc
gacgacggcgagatcgagctggcgaaggacaccccgccgcagaccacccgggccaagctg
cggggcgacttcatcgccgccgcgcaggcggccgggcgggacttcacggtcgactgggtg
cacctgaagctcaacgaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgtgcc
gtggacgagcgcgtcgaccggctgatcagctcgctgtag
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