Acidisarcina polymorpha: ACPOL_6071
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Entry
ACPOL_6071 CDS
T05576
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abas
Acidisarcina polymorpha
Pathway
abas03410
Base excision repair
abas03430
Mismatch repair
abas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACPOL_6071
03430 Mismatch repair
ACPOL_6071
03440 Homologous recombination
ACPOL_6071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abas03400
]
ACPOL_6071
DNA repair and recombination proteins [BR:
abas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACPOL_6071
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACPOL_6071
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACPOL_6071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
L27
PDDEXK_11
Motif
Other DBs
NCBI-ProteinID:
AXC15315
UniProt:
A0A2Z5G9S3
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Position
6495110..6496915
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AA seq
601 aa
AA seq
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MPPTDIDAARELAQSAGIPVVLAQLLRLRGVHSPEAAERFLNVSFDHLHDPYSMAGMTVA
VARVKAAIARREPILIYGDYDVDGTVAVVLLKTAIEMIAGPGRSDVRFHVPHRLREGYGM
KSEVVEAAVAAGARLVISVDTGIRAFAAAEAAASLGIDLIVTDHHLPDLGRGLPPAIAVL
NPNQQDCQYACKHLCGAGVAFKLAQALLEAHDRVRAREKILPSFLKMLAIATIADAVPLL
GENRAIAALGIEQLGRPAHPGLRALLELAKLDPVQRRLTSTDIAFRLAPRINAAGRMDIA
SEVVEMFTTRDSQRARFLAEKLDRLNSDRRNTEAGILDKIEAQLKQDPRLREGPCIVLDG
EGWHRGVIGILASRVVEQTGRPAIVITHEADVGAAGGDNAGEAEAHGSGRSIPGFHLLQA
IESCHELFTRFGGHAHAVGFSLPSSRVPELRQRLTDYAGIHLRQEDLEPMLLCDAYLPLD
QITPELYACLQRLHPTGMNNEDPRFVATNVKVVGQPRILKELHVKLQLARGPGEGAIPAL
AWRWAGRLAAMGVGDGALLDVVYRLRHNQHPDFGGVELEIEDLRLAEAAAVQSSHPPHSS
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgactgacatcgatgcggcccgggagctcgcgcaaagcgccggcatcccagtg
gtgctggctcagcttttacggctgcgcggcgtccactccccggaggcagcggagcggttt
ctgaacgtcagcttcgatcacctccacgatccctacagcatggccgggatgacggtggcg
gtggcgcgggtcaaggcggcgatcgcccgccgcgagccgatcctgatctacggcgattat
gacgttgatgggacggtggccgtggtcctgctcaagacggcaatcgaaatgatcgcgggc
ccgggacggagtgacgtccgcttccacgtgcctcaccggctccgcgagggttacggcatg
aagagcgaggtggtcgaagccgccgtggccgccggtgcccgtctcgtgatcagcgtcgac
actggaattcgggcttttgcagcagccgaagcagccgccagtctcggcatcgacctgatt
gtcacggaccatcatctgccggatctcggccgaggactgccaccggcaattgcggtgctc
aaccccaatcagcaggactgccaatatgcgtgcaagcatctctgcggcgcgggtgtggcc
ttcaagctggcccaggcactgcttgaggcccatgaccgggtgagagcgcgggaaaagatc
ctgccatccttcctgaagatgctggcgattgccaccatcgcggatgcggttccgctgctc
ggcgagaaccgggcgattgcggctctcggcatcgagcagctcggccgcccggcacacccg
gggcttcgggcgctgctggagctggcgaagctcgaccccgtgcagcgccgtctcacctcg
accgacatcgccttccggctggccccacgcatcaatgccgccgggcgcatggatatcgcg
tccgaggtagttgagatgttcaccacccgcgactcccagcgcgcccgcttcctggcagag
aagcttgatcgcctgaactccgatcgccgcaacaccgaggccggcattctcgacaagatc
gaagcccagcttaagcaagatcctcggcttcgggaaggcccctgcattgtgctcgacgga
gagggctggcatcgcggggtgattggcatccttgcctcgcgggtcgtcgagcagacggga
cgcccggcaatcgtgattactcacgaggcagacgtcggcgctgcgggcggcgacaacgca
ggggaggctgaggcgcatggatcgggacgctccattcctggctttcatcttcttcaggcc
atcgagagctgccacgaactcttcactcgcttcggaggccatgctcacgcggtcggtttc
tcgttgccatccagccgggtgccggaattgcgccagcgcctcactgactatgccggcatt
catctgaggcaggaggacctggagcccatgctgctgtgcgatgcttatttgccgctcgac
cagatcactccagaactctatgcatgcctgcagcgccttcaccctaccggcatgaacaac
gaagatccgcgctttgtcgctaccaacgtaaaagtggtgggacagccccgcatcctgaag
gagcttcatgtcaaactgcagttggctcgaggcccgggcgaaggtgccatacccgctctc
gcctggcgctgggccggcaggcttgcggcgatgggagtcggcgacggcgccttgctggat
gtggtctaccggcttcgccacaaccagcatcccgacttcgggggcgttgaattggaaatc
gaagaccttcggctcgcggaggccgcggcggtgcagagttcgcatccgccacactcctcg
gcttag
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