KEGG   Aeromonas bestiarum: IU367_18855
Entry
IU367_18855       CDS       T08822                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
abes  Aeromonas bestiarum
Pathway
abes02024  Quorum sensing
abes03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IU367_18855 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IU367_18855 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abes03019]
    IU367_18855 (hfq)
   03036 Chromosome and associated proteins [BR:abes03036]
    IU367_18855 (hfq)
Messenger RNA biogenesis [BR:abes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     IU367_18855 (hfq)
Chromosome and associated proteins [BR:abes03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    IU367_18855 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM Iec3-like_M
Other DBs
NCBI-ProteinID: WDL82110
LinkDB
Position
4122455..4122817
AA seq 120 aa
MTTESPSYSTIEQAFSLGNGQDSALNWLRKNRSQVAIFLVSGIKLEGTISGFDQYSVLLT
DAHGNQQLVYKAKISTIAMHSGRPQVSIQRARKPRVSMAPRPHGAPGRYDDNQGGGSSEQ
NT seq 363 nt   +upstreamnt  +downstreamnt
atgacaactgaatccccaagctactccacgatcgagcaagccttctccctcgggaacggg
caagattctgccctcaactggttgcgcaagaatcgcagtcaggttgccatcttcctggtg
agcggcatcaagctggaggggaccatcagcggtttcgaccagtacagcgtgctgttgacc
gatgcccatggcaaccagcagctggtctacaaggccaagatctccaccatcgccatgcac
tccggccgtccccaggtcagcatacagcgtgcccgcaagccgcgcgtctccatggcgccg
cgtccccatggcgcccccggtcgttacgatgacaatcagggcggcggtagcagcgagcag
taa

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