Acinetobacter baumannii BJAB07104: BJAB07104_03166
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Entry
BJAB07104_03166 CDS
T02726
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
abj
Acinetobacter baumannii BJAB07104
Pathway
abj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJAB07104_03166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abj03400
]
BJAB07104_03166
Enzymes [BR:
abj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BJAB07104_03166
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BJAB07104_03166
DNA repair and recombination proteins [BR:
abj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJAB07104_03166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AGQ15534
LinkDB
All DBs
Position
3337410..3338234
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AA seq
274 aa
AA seq
DB search
MPELPEVETTKTSLFPLLNQKVLSVEVRNPSLRWPIPDNVQKLVGQRLIGLNRRSKYILA
EFEQDQMLWHLGMSGSFRLCQPNDELRKHDHLIIQFEDQQLRYHDPRRFGCILWLNPETQ
GKLIDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIH
PAQPAGDLTMQQIEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYFQQTLLAYGRAGE
MCVNCETTLENLKLGQRASVFCPQCQPLKKLRKP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacccgaagtcgaaaccactaaaaccagtttatttcccttattgaatcaa
aaagttctaagtgttgaagtacgcaatcctagcttacgctggcctataccagataatgtt
cagaaacttgttgggcaacgtctcattgggttaaatcgacgttcaaaatatattttggca
gagtttgaacaagatcaaatgctctggcatttaggaatgtcaggtagttttcgcctgtgt
caaccaaacgatgaattgagaaaacacgatcatctcattattcaatttgaagatcagcag
ttacgttaccatgacccacgtcgttttggctgtattctttggcttaatcctgaaactcaa
ggcaaactcatcgatactttagggccagagcctttaagtactgactttcatgcagaatat
ttagcttttaaactcaagaataaatctgtcggcataaaaattgcactcatggataatcat
gtagtggttggtgttggcaatatctatgcaactgaaagtttgtttaatgttggcattcat
ccagcacagcccgctggtgatttaaccatgcaacagattgagaaactggttgttgagatt
aagcgaattttgaagtcagcaattgatttaggtggctcgactttacgagactacagcaat
gccatgggtgaaaatggttattttcaacagactttactcgcttatggtcgtgccggtgaa
atgtgtgttaactgtgaaaccacattagaaaacttaaaactcggtcagcgtgccagcgta
ttttgcccacagtgccaaccacttaaaaagctgagaaagccttaa
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