Aliarcobacter butzleri 7h1h: A7H1H_1817
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Entry
A7H1H_1817 CDS
T02755
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
abl
Aliarcobacter butzleri 7h1h
Pathway
abl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A7H1H_1817 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abl03021
]
A7H1H_1817 (rpoB)
03400 DNA repair and recombination proteins [BR:
abl03400
]
A7H1H_1817 (rpoB)
Enzymes [BR:
abl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A7H1H_1817 (rpoB)
Transcription machinery [BR:
abl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A7H1H_1817 (rpoB)
DNA repair and recombination proteins [BR:
abl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A7H1H_1817 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Thioredoxin_3
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AGR78080
LinkDB
All DBs
Position
complement(1763828..1767976)
Genome browser
AA seq
1382 aa
AA seq
DB search
MLNSLKSGNRLRVDFAKNPQKIEIPNLLQLQQTSYDTFLMIGQEDRTTAGIEKVFKSIFP
IHDVQNRLTLDYLGSEVGKPKYDVRESMVRGLTYSIPLKINIRLTLWDLDEKTGEKIGVK
DMKEQSLFIREIPLMTDRTSFIVNGVERVVVNQLHRSPGVIFKEEESNTADNKLIYTGQI
IPDRGSWLYFEYDSKDVLYVRINKRRKVPVTILFRALGYSKEDIIKLFYPIVNIKIKNNK
FLTEFNPDDFMGRIEFDVKDDKGNLVIGAGKRLTARKAKALIEGGLKLIEYPLELLMDRS
TANTIYDPESGEVLFDALTNLDELKLKKLLDLGFESFDIANDLAVGIDASIINAFKADAE
SLKLLKQTEQIDDENDLAAIRIYKVMRPGEPVTKEAAKDFVKKLFFDPERYDLTKVGRMK
MNHKLGVNVPEYVTTLTYEDVIKTVQYLVKVKSGHGHIDDRDHLGNRRIRAIGELLANEL
HAGLIKMQKAIRDKMTTLSGTLEDLMPHDLVNSKMITSTITEFFTSGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTFSKVN
DLGFIEAPYKKVVDGVVTNEISYYTATQEEGLVIAPGSTKVDENGKIIEPLIEVRKNGEI
LLMERNSVDLIDISSQMVMGVAASLIPFLEHDDANRALMGSNMMRQAVPLLRPSAPVVGT
GLEKIVARDAWEAIKANRAGLVEKADAKNIYIRGEDENGAFIDHYTVNKNVRTNNNTSFG
QRIAVKEGDFVQKGQVIADGPSMDKGELAVGINAMVAFMPWNGYNYEDAIILSERLIEED
AFTSVHIYEKEIECRELKHGNEEITRDLPGVKEESISHLDNSGIVKVGTYVTPGMILVGK
VTPKGEIKPTPEERLLRAIFGEKAGHVINKSLVCPTSMEGTVVDVKVFTKKGYEKDDRAV
AEIESEKAELDLKHHDKLLMLDREEILKINDLLLKATLTKDVELDDVVYKKGETIPVDVL
NNVNRFAMKKVVSSYSKEIEKAYNDIKEYFIKQKAHLREEHEEKLQILEHDDILSSGVIK
QVKVYIATKRKIKVGDKMAGRHGNKGIVSNIVPKVDMPYLEDGTTVDVILNPLGVPSRMN
IGQILEVHLGLAGKKLGNQIQDIFEAKRADFIAELRAKMTEIASVAKLMNGKAFMDSLND
EELVQYAQDWAKGVRFATQIFDGVKAEEFAKLFELAKIDSDGKCVLFDGKTGEKMKERVN
VGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGATNV
LKEMLTTKSDDVEGRTKAYRAIANGENVPNSGVPETFFVLTKELKALALDVEIFGEVENN
EQ
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactctttaaaatctggtaatagacttagagttgattttgcaaaaaatccacaa
aaaattgaaattccaaacttactacagttacaacaaacttcatatgacacatttttaatg
attggtcaagaagatagaactactgctggtatagaaaaagtattcaaatctatttttcca
attcatgatgttcaaaatagacttacacttgattatttaggtagcgaagttggtaaacct
aaatatgatgttagagagtcaatggttagaggactaacttattcaattcctcttaaaatt
aatattagattaactttatgggatttagacgaaaaaactggtgaaaaaatcggtgttaaa
gatatgaaagaacaatctttattcatcagagaaattcctttaatgactgatagaacatct
tttattgttaatggtgttgaaagagttgttgttaatcaattacatagatctcctggtgtt
atcttcaaagaagaagaatcaaatactgctgataataaacttatttatactgggcaaatt
attccagaccgtggttcatggttatattttgaatatgattcaaaagatgtattatatgta
agaattaataaaagaagaaaagttcctgtaacaattttatttagagcattaggttattct
aaagaagatattatcaaactattttatccaattgttaatattaaaattaaaaataataaa
tttttaactgaatttaatcctgatgattttatgggaagaattgaatttgatgttaaagat
gacaaaggtaacttagttattggtgccggaaaaagattaactgctagaaaagctaaagct
ttaattgaaggtggattaaaattaattgaatatcctcttgaacttttaatggatagaagt
acagcaaatacaatttatgatccagaatctggagaagttttatttgatgctttaacaaat
cttgatgaattaaaattaaaaaaacttttagatttaggatttgagtcatttgatattgca
aatgatttagctgttggaattgatgcttctattataaatgcatttaaagctgatgctgaa
tctttaaaattattaaaacaaacagaacaaattgatgatgaaaatgatttagcagcaatt
agaatttataaagttatgagaccaggtgagcctgtaactaaagaagctgcaaaagatttt
gttaaaaaacttttctttgatccagaaagatatgatttaacaaaagttggaagaatgaaa
atgaatcataaattaggtgtaaatgtacctgagtacgttacaactttaacttatgaagat
gttatcaagactgttcaatatttagtaaaagttaaatctggtcatggtcatatcgatgat
agagatcacttaggaaatagaagaattagagcaattggtgaattacttgcaaatgaatta
catgctggtttaatcaaaatgcaaaaagctattagagataaaatgactactttaagtgga
acattagaagacttaatgccacatgatttagttaactctaaaatgattacttcaacaatt
actgaattctttacaagtggtcaattatctcaatttatggaccaaacaaatccattatca
gaagttactcataaaagaagactttctgcattaggtgagggtggtttagtaaaagagaga
gctggatttgaagtaagggacgttcacccaactcactatggaagaatctgtccagttgaa
actccagagggtcaaaatattggacttatcaatactttatcaactttctcaaaagttaat
gatttaggatttatcgaagctccatataaaaaagttgtagatggtgttgttacaaatgaa
atttcatactatacagctactcaagaagagggacttgtaattgctcctggttcaacaaaa
gttgatgagaatggaaaaattattgaaccattgattgaagttagaaaaaatggtgaaatt
ttattaatggaaagaaatagtgttgatttaatagatatttcttctcaaatggttatgggg
gttgcagcttctttaatcccatttttagaacatgatgatgccaatagagcacttatgggt
tcaaacatgatgagacaagcggttcctttattaagaccaagtgctcctgttgttggaact
ggattagaaaaaattgttgcgcgtgatgcatgggaagcaattaaagctaatagagctgga
cttgtagaaaaagcagatgcaaaaaatatttacatcagaggtgaagatgaaaacggtgct
ttcattgatcactatactgtaaataaaaatgtaagaacaaataataatacatcatttgga
caaagaatagcagttaaagaaggtgattttgttcaaaaaggtcaagtaattgctgatggt
ccatctatggataaaggtgaacttgctgttggtattaatgcgatggttgcatttatgcca
tggaatggatataactacgaagatgctattattttaagtgaaagattaattgaagaagat
gcgttcacatctgttcatatttatgaaaaagagattgaatgtagagaattaaaacacggt
aatgaagaaataacaagagatttaccaggtgtaaaagaagaatcaatttctcatttagat
aattcaggaatcgtaaaagtaggaacttatgttactcctggaatgattttagttggaaaa
gtaactcctaaaggtgaaattaaaccaactccagaagaaagattacttagagcaattttt
ggtgaaaaagcaggacatgtaataaataaatctttagtatgtccaacatcaatggaaggt
actgttgttgatgtaaaagtatttactaaaaaaggttatgaaaaagatgatagagctgta
gctgaaatcgaatcagaaaaagcagaacttgatttaaaacaccatgataaattattgatg
ttagatagagaagagattttaaaaatcaatgatttattattaaaagctactttaactaaa
gatgtagagttagacgatgttgtttataaaaaaggtgaaacaattcctgttgatgtttta
aataatgttaatagatttgctatgaaaaaagttgtatcttcatattctaaagagatagaa
aaagcatacaatgatattaaagagtactttattaaacaaaaagcgcatttaagagaagag
catgaagaaaaacttcaaattttagaacacgatgatattttatcttcaggtgttataaaa
caagtaaaagtttatatagcaactaaaagaaaaatcaaagttggggataaaatggctgga
cgacatggaaacaaaggtatcgtttctaacatcgttccaaaagttgatatgccatattta
gaagatggaacaacagttgatgttattttaaatccactaggggttccttctaggatgaat
attgggcaaattcttgaagttcacttaggattagctggtaaaaaacttggtaaccaaatt
caagatatttttgaagcaaaaagagctgattttattgcagaactaagagcaaaaatgact
gaaattgcaagtgttgcaaaacttatgaatggtaaagcatttatggattctttaaatgat
gaagaattagttcaatacgcacaagattgggcaaaaggtgtaagatttgctactcaaatc
tttgatggagtaaaagcagaagaatttgcaaaattatttgaattagcaaaaattgatagt
gatggaaaatgtgttctttttgatgggaaaactggtgaaaaaatgaaagaaagagtaaac
gtaggttatatgtatatgcttaaacttcaccacttagttgacgaaaaagttcatgctaga
agtacaggtccatattctcttgtaacacaacaaccagttggaggaaaagctctatttggt
ggacaaagatttggagagatggaagtttgggcattagaagcttatggtgcaacaaatgta
cttaaagagatgcttacaacaaaatcagatgatgttgaaggtagaacaaaagcttataga
gcaattgcgaatggtgaaaatgttcctaattctggagttccagagacattcttcgtatta
acaaaagagttaaaagctctagcactagatgtagagatttttggagaggtagaaaacaat
gagcaataa
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