Apilactobacillus bombintestini: D7I45_01940
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Entry
D7I45_01940 CDS
T07159
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
abom
Apilactobacillus bombintestini
Pathway
abom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D7I45_01940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abom03021
]
D7I45_01940
03400 DNA repair and recombination proteins [BR:
abom03400
]
D7I45_01940
Enzymes [BR:
abom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D7I45_01940
Transcription machinery [BR:
abom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D7I45_01940
DNA repair and recombination proteins [BR:
abom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D7I45_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AYF92331
UniProt:
A0A387ASG9
LinkDB
All DBs
Position
412329..415925
Genome browser
AA seq
1198 aa
AA seq
DB search
MAGHLVKYGKHRIRRSYSQIKEVLDLPNLIEIQTDSYKWFLDEGLREMFNSIMPIDDFQG
KLSLEFVDYQLLEPKYTVSEARDHEANYSAPLHITLKLTNHETGEIKTQDVFFGDFPLMT
DQGTFIINGAERVIVSQLVRSPGVFFHKDEDKNGRISYGTTVIPNRGAWMEFETDAKNLS
YVRIDRTRKLPITELVRALGFGSDDEITQILGSNDSLSLTLEKDVHKDTEDSRVEESLKD
IYERLRPGEPKTADSARNLLTTRFFDHKRYDMAPVGRYKTNNKLSLKTRLLGLTLAETLA
DPDTGEIIAKKDTVVDKNVMKKLAPYLDRDDFKAYTFNPSEQSVVPEPMTVQIIKVYSEK
DPDHVVNMIGNDNIPLDYHHITPADIISSINYFFNLQEGIGEPDDIDHLGNRRIRSVGEL
LQNQFRIGLARMERVVRERMSIQDTSTVTPQQLINIRPVVASVKEFFGSSQLSQFMDQTN
PLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRICPIETPEGPNIGLINSLSSYA
KINKYGFVETPYRRVSWDTHKVTDKIDYLSADEEDNYVVAQANSPLNDDGSFTNDVVMAR
YKSKNIETKIENVDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLVNPHA
PLVGTGIEYKAAHDSGVALICKHPGTVEYVDATEVRVRRDDGSLDTYKLMKFQRSNGGKN
YNQRPIVRVNDHVDADEILADGPSMENGELALGQNPVVAFMTWQGYNFEDAIGISERLVR
DDVYTSIHIEEYESETRDTKLGPEEMTREIPNVGEDALKNLDEEGIIRIGAEVHDGDILV
GKVTPKGVTELSAEERLLHAIFGEKSREVRDTSLRVPHGGGGIVQDVKIFTRENGDELSP
GVNKMARVYIAQKRKIQVGDKMSGRHGNKGTVSIVIPEEDMPYLPDGTPIDILLSPMGVP
SRMNIGQVLELHLGMAARKLGIHVTTPVFDGARDSDIWDAVKEAGMASDGKSIVYDGRTG
EPFDKRIAVGVMHYLKLAHMVDDKIHARAIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPQPGVPESFRVLVKELQALGLDMK
VLNDDNQEIELRDLDDEEEDGVVNVDALSKLAEKQKQEKAEKAAESEKDDKANTNSKE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatttagttaaatatggtaaacaccgtattcgtagaagttactctcaaatc
aaggaagttcttgatttacctaatttaattgaaattcaaaccgattcatataagtggttc
ttagatgaaggtttgcgcgaaatgttcaatagcattatgccaattgatgatttccaagga
aaactatccttagaattcgttgattatcaactattagaacctaaatacactgttagtgaa
gcaagagatcatgaggcaaactactcagctccacttcacatcacattaaaattgaccaat
catgaaactggtgaaattaagacccaagatgtattctttggtgatttcccattaatgact
gatcaaggtacattcattattaacggggcagaacgtgtaattgtttcacaattagtacgt
tctcctggtgttttcttccacaaggatgaagacaagaacggtcgtatcagctatggtact
actgtaattcccaaccgtggtgcatggatggaatttgaaactgatgcaaagaacttatca
tatgtacgtattgatagaactagaaagctaccaattactgaattagttcgtgcattaggt
tttggttctgatgacgaaattacacaaatattaggtagtaatgatagtctttcattaaca
cttgaaaaggatgttcataaagatactgaagattcacgtgttgaagaatcattgaaagac
atttacgaacgtctacgtccaggtgaacctaagactgctgattcagctcgtaatttatta
actactcgtttcttcgatcacaaacgttatgacatggctcctgttggtagatacaagact
aacaacaagttgagcttaaagactcgtttattaggtttaactcttgctgaaacattagct
gatcctgataccggagaaattattgctaagaaagatactgttgttgataaaaatgttatg
aagaagttagcaccttacttagatcgtgatgacttcaaagcatacaccttcaacccttca
gaacaatctgttgttcctgaacctatgacagtacaaattattaaagtatattctgaaaaa
gatccagatcatgtagttaacatgattggtaacgataatattcctttggattaccatcac
attactccagcggatattatttcttccattaactacttctttaacctacaagaaggaatc
ggagaacctgatgacattgaccatttaggtaaccgtcgtattcgttctgttggtgaatta
ctacaaaaccaattcagaattggtttagcaagaatggaacgtgttgttagagaacgtatg
tcaattcaagacacttcaactgttactccacaacaactaattaacattcgtcctgtagta
gcatctgttaaagaattctttggttcatcacaattgtcacaattcatggaccaaactaac
ccattgggtgaattaactcacaaacgtcgtctatctgctttaggacctggtggtttaact
agagaccgtgccggttacgaagttcgtgacgttcactacactcactatggtcgtatttgt
cctattgaaacacctgaaggtcctaacattggtttgattaactcactatcaagttatgct
aagatcaacaagtatggtttcgttgaaactccataccgtcgtgtatcatgggatactcat
aaagttactgataagattgattacttatcagctgacgaagaagataactatgttgttgcc
caagccaactcaccattaaatgatgatggttcatttactaacgacgtagttatggctaga
tacaagtcaaagaatattgaaactaagattgaaaacgttgactacatggacgtttcacct
aaacaagtagtttctgtcgcaactgcatgtattccattcttggaaaacgatgactccaac
cgtgccttgatgggtgctaacatgcaacgtcaagcggttcctttggttaacccacatgca
ccactagttggtactggtattgaatacaaggccgctcatgactctggtgttgctctaatc
tgtaaacacccaggaactgttgaatatgtagatgctaccgaagttcgtgttcgtagagac
gatggttcattagatacttacaagctaatgaagttccaacgttcaaacggtggtaagaac
tacaaccaacgtcctatcgtaagagttaacgatcacgttgacgctgacgaaatcttagct
gatggtccttcaatggaaaacggagaacttgctttaggtcaaaacccagtggttgccttc
atgacttggcaaggttacaacttcgaagatgccattggtatttcagaaagattagttaga
gacgatgtatacacttcaattcatattgaagaatacgaatcagaaactagagataccaaa
cttggacctgaagaaatgacaagagaaattcctaacgttggggaagacgcattgaagaac
cttgacgaagaaggaattattagaattggtgctgaagttcatgatggtgacatcttagtt
ggtaaggtaactcctaagggtgttacagaattatcagctgaagaacgtttactacatgct
atcttcggtgaaaaatcacgtgaagttcgtgatacatcactacgtgtaccacacggtggt
ggcggtatcgtccaagatgttaagatcttcactcgtgaaaatggtgatgaattatcacca
ggtgtaaacaagatggctcgtgtttacattgctcaaaaacgtaagattcaagttggagat
aagatgtctggtcgtcacggtaacaaaggtactgtttccattgttatccctgaagaagac
atgccatacttaccagatggtactccaatcgatatcctattgagtcctatgggtgtgcct
tctcgtatgaacattggacaagttcttgaattacacttaggtatggctgctagaaaactt
ggcatccatgtaactacaccggtattcgacggtgctcgtgattcagatatttgggacgct
gttaaagaagctggtatggcttcagacggtaagtcaattgtttatgatggtagaactggt
gaaccattcgacaaacgtattgccgttggtgttatgcactacttgaaacttgctcacatg
gttgatgataagattcatgctcgtgctatcggaccttactcattagttactcaacaacca
cttggtggtaaagcacaatttggtggacaacgttttggtgaaatggaagtttgggcccta
gaagcttacggtgctgcttacacactacaagaaatcttgacttacaagtcagatgatgtt
gttggtcgtgttaagacttacgaagctatcgttaagggtgaaccaattcctcaaccaggt
gttcctgaatcattccgtgttcttgttaaggaactacaagctctaggattagacatgaag
gttcttaacgatgataaccaagaaattgaacttcgtgacttagatgacgaagaagaagac
ggagttgtaaatgttgatgctctaagtaaactagctgaaaagcaaaaacaagaaaaggct
gaaaaagctgctgaatccgaaaaggatgacaaagcaaacaccaactctaaggaataa
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integrated database retrieval system