KEGG   Apilactobacillus bombintestini: D7I45_01940
Entry
D7I45_01940       CDS       T07159                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
abom  Apilactobacillus bombintestini
Pathway
abom03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:abom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    D7I45_01940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abom03021]
    D7I45_01940
   03400 DNA repair and recombination proteins [BR:abom03400]
    D7I45_01940
Enzymes [BR:abom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     D7I45_01940
Transcription machinery [BR:abom03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     D7I45_01940
DNA repair and recombination proteins [BR:abom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      D7I45_01940
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AYF92331
UniProt: A0A387ASG9
LinkDB
Position
412329..415925
AA seq 1198 aa
MAGHLVKYGKHRIRRSYSQIKEVLDLPNLIEIQTDSYKWFLDEGLREMFNSIMPIDDFQG
KLSLEFVDYQLLEPKYTVSEARDHEANYSAPLHITLKLTNHETGEIKTQDVFFGDFPLMT
DQGTFIINGAERVIVSQLVRSPGVFFHKDEDKNGRISYGTTVIPNRGAWMEFETDAKNLS
YVRIDRTRKLPITELVRALGFGSDDEITQILGSNDSLSLTLEKDVHKDTEDSRVEESLKD
IYERLRPGEPKTADSARNLLTTRFFDHKRYDMAPVGRYKTNNKLSLKTRLLGLTLAETLA
DPDTGEIIAKKDTVVDKNVMKKLAPYLDRDDFKAYTFNPSEQSVVPEPMTVQIIKVYSEK
DPDHVVNMIGNDNIPLDYHHITPADIISSINYFFNLQEGIGEPDDIDHLGNRRIRSVGEL
LQNQFRIGLARMERVVRERMSIQDTSTVTPQQLINIRPVVASVKEFFGSSQLSQFMDQTN
PLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRICPIETPEGPNIGLINSLSSYA
KINKYGFVETPYRRVSWDTHKVTDKIDYLSADEEDNYVVAQANSPLNDDGSFTNDVVMAR
YKSKNIETKIENVDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLVNPHA
PLVGTGIEYKAAHDSGVALICKHPGTVEYVDATEVRVRRDDGSLDTYKLMKFQRSNGGKN
YNQRPIVRVNDHVDADEILADGPSMENGELALGQNPVVAFMTWQGYNFEDAIGISERLVR
DDVYTSIHIEEYESETRDTKLGPEEMTREIPNVGEDALKNLDEEGIIRIGAEVHDGDILV
GKVTPKGVTELSAEERLLHAIFGEKSREVRDTSLRVPHGGGGIVQDVKIFTRENGDELSP
GVNKMARVYIAQKRKIQVGDKMSGRHGNKGTVSIVIPEEDMPYLPDGTPIDILLSPMGVP
SRMNIGQVLELHLGMAARKLGIHVTTPVFDGARDSDIWDAVKEAGMASDGKSIVYDGRTG
EPFDKRIAVGVMHYLKLAHMVDDKIHARAIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPQPGVPESFRVLVKELQALGLDMK
VLNDDNQEIELRDLDDEEEDGVVNVDALSKLAEKQKQEKAEKAAESEKDDKANTNSKE
NT seq 3597 nt   +upstreamnt  +downstreamnt
ttggcaggacatttagttaaatatggtaaacaccgtattcgtagaagttactctcaaatc
aaggaagttcttgatttacctaatttaattgaaattcaaaccgattcatataagtggttc
ttagatgaaggtttgcgcgaaatgttcaatagcattatgccaattgatgatttccaagga
aaactatccttagaattcgttgattatcaactattagaacctaaatacactgttagtgaa
gcaagagatcatgaggcaaactactcagctccacttcacatcacattaaaattgaccaat
catgaaactggtgaaattaagacccaagatgtattctttggtgatttcccattaatgact
gatcaaggtacattcattattaacggggcagaacgtgtaattgtttcacaattagtacgt
tctcctggtgttttcttccacaaggatgaagacaagaacggtcgtatcagctatggtact
actgtaattcccaaccgtggtgcatggatggaatttgaaactgatgcaaagaacttatca
tatgtacgtattgatagaactagaaagctaccaattactgaattagttcgtgcattaggt
tttggttctgatgacgaaattacacaaatattaggtagtaatgatagtctttcattaaca
cttgaaaaggatgttcataaagatactgaagattcacgtgttgaagaatcattgaaagac
atttacgaacgtctacgtccaggtgaacctaagactgctgattcagctcgtaatttatta
actactcgtttcttcgatcacaaacgttatgacatggctcctgttggtagatacaagact
aacaacaagttgagcttaaagactcgtttattaggtttaactcttgctgaaacattagct
gatcctgataccggagaaattattgctaagaaagatactgttgttgataaaaatgttatg
aagaagttagcaccttacttagatcgtgatgacttcaaagcatacaccttcaacccttca
gaacaatctgttgttcctgaacctatgacagtacaaattattaaagtatattctgaaaaa
gatccagatcatgtagttaacatgattggtaacgataatattcctttggattaccatcac
attactccagcggatattatttcttccattaactacttctttaacctacaagaaggaatc
ggagaacctgatgacattgaccatttaggtaaccgtcgtattcgttctgttggtgaatta
ctacaaaaccaattcagaattggtttagcaagaatggaacgtgttgttagagaacgtatg
tcaattcaagacacttcaactgttactccacaacaactaattaacattcgtcctgtagta
gcatctgttaaagaattctttggttcatcacaattgtcacaattcatggaccaaactaac
ccattgggtgaattaactcacaaacgtcgtctatctgctttaggacctggtggtttaact
agagaccgtgccggttacgaagttcgtgacgttcactacactcactatggtcgtatttgt
cctattgaaacacctgaaggtcctaacattggtttgattaactcactatcaagttatgct
aagatcaacaagtatggtttcgttgaaactccataccgtcgtgtatcatgggatactcat
aaagttactgataagattgattacttatcagctgacgaagaagataactatgttgttgcc
caagccaactcaccattaaatgatgatggttcatttactaacgacgtagttatggctaga
tacaagtcaaagaatattgaaactaagattgaaaacgttgactacatggacgtttcacct
aaacaagtagtttctgtcgcaactgcatgtattccattcttggaaaacgatgactccaac
cgtgccttgatgggtgctaacatgcaacgtcaagcggttcctttggttaacccacatgca
ccactagttggtactggtattgaatacaaggccgctcatgactctggtgttgctctaatc
tgtaaacacccaggaactgttgaatatgtagatgctaccgaagttcgtgttcgtagagac
gatggttcattagatacttacaagctaatgaagttccaacgttcaaacggtggtaagaac
tacaaccaacgtcctatcgtaagagttaacgatcacgttgacgctgacgaaatcttagct
gatggtccttcaatggaaaacggagaacttgctttaggtcaaaacccagtggttgccttc
atgacttggcaaggttacaacttcgaagatgccattggtatttcagaaagattagttaga
gacgatgtatacacttcaattcatattgaagaatacgaatcagaaactagagataccaaa
cttggacctgaagaaatgacaagagaaattcctaacgttggggaagacgcattgaagaac
cttgacgaagaaggaattattagaattggtgctgaagttcatgatggtgacatcttagtt
ggtaaggtaactcctaagggtgttacagaattatcagctgaagaacgtttactacatgct
atcttcggtgaaaaatcacgtgaagttcgtgatacatcactacgtgtaccacacggtggt
ggcggtatcgtccaagatgttaagatcttcactcgtgaaaatggtgatgaattatcacca
ggtgtaaacaagatggctcgtgtttacattgctcaaaaacgtaagattcaagttggagat
aagatgtctggtcgtcacggtaacaaaggtactgtttccattgttatccctgaagaagac
atgccatacttaccagatggtactccaatcgatatcctattgagtcctatgggtgtgcct
tctcgtatgaacattggacaagttcttgaattacacttaggtatggctgctagaaaactt
ggcatccatgtaactacaccggtattcgacggtgctcgtgattcagatatttgggacgct
gttaaagaagctggtatggcttcagacggtaagtcaattgtttatgatggtagaactggt
gaaccattcgacaaacgtattgccgttggtgttatgcactacttgaaacttgctcacatg
gttgatgataagattcatgctcgtgctatcggaccttactcattagttactcaacaacca
cttggtggtaaagcacaatttggtggacaacgttttggtgaaatggaagtttgggcccta
gaagcttacggtgctgcttacacactacaagaaatcttgacttacaagtcagatgatgtt
gttggtcgtgttaagacttacgaagctatcgttaagggtgaaccaattcctcaaccaggt
gttcctgaatcattccgtgttcttgttaaggaactacaagctctaggattagacatgaag
gttcttaacgatgataaccaagaaattgaacttcgtgacttagatgacgaagaagaagac
ggagttgtaaatgttgatgctctaagtaaactagctgaaaagcaaaaacaagaaaaggct
gaaaaagctgctgaatccgaaaaggatgacaaagcaaacaccaactctaaggaataa

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