Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT115178
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Entry
AGABI1DRAFT115178 CDS
T03136
Symbol
AGABI1DRAFT_115178
Name
(RefSeq) hypothetical protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03022
Basal transcription factors
abp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI1DRAFT115178 (AGABI1DRAFT_115178)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT115178 (AGABI1DRAFT_115178)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT115178 (AGABI1DRAFT_115178)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT115178 (AGABI1DRAFT_115178)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AGABI1DRAFT115178 (AGABI1DRAFT_115178)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AGABI1DRAFT115178 (AGABI1DRAFT_115178)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
Gemin6
Motif
Other DBs
NCBI-GeneID:
18824623
NCBI-ProteinID:
XP_007331876
JGI:
Agabi_varbur_1_115178
UniProt:
K5WQM3
LinkDB
All DBs
Position
Unknown
AA seq
64 aa
AA seq
DB search
MRAIKGVLFFCDPAVKQILLVMNEKQSFIIEDLDDHHLVIKADEEYRVRRELETELEKNT
YSLD
NT seq
195 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcaatcaaaggtgtccttttcttctgtgaccccgccgtaaagcagattttgctc
gtcatgaacgaaaaacagagcttcataatcgaggaccttgatgaccatcatctggtcatc
aaagcagatgaagagtatcgtgttcgacgagaactggaaacagagcttgagaagaatacc
tacagcttggattaa
DBGET
integrated database retrieval system
