Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT97790
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Entry
AGABI1DRAFT97790 CDS
T03136
Symbol
AGABI1DRAFT_97790
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI1DRAFT97790 (AGABI1DRAFT_97790)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT97790 (AGABI1DRAFT_97790)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI1DRAFT97790 (AGABI1DRAFT_97790)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AGABI1DRAFT97790 (AGABI1DRAFT_97790)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
Sugar_tr
CNOT1_HEAT
ARM_Cnot1
MFS_1
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
18832941
NCBI-ProteinID:
XP_007326742
JGI:
Agabi_varbur_1_97790
UniProt:
K5Y492
LinkDB
All DBs
Position
Unknown
AA seq
2359 aa
AA seq
DB search
MSNFVFSFVTAIFTVGGLLGSLVANIFMDRLGRKGASQVTALFHIVGAGLMGVSGSVTTL
SFGRFLIGVGSGIGVLTQLGIVLGIMSTQIVGFRYSTPTEWRFVLFLSSAISCVQFVTGY
MIVESPAWLGMQNRSEEKKTVSERIWRANSTRATPSMASDENPLLEDVEARRPETSTNTT
TVLQLFFSPELRKPLMITCFAMMSQQISGMRHLVLYYSNEILSKSLPDLGPYVSLGITVV
NVIMTFPPIFLIERVGRKSLLGISTIGALASLASIGFGLNNDHSTMTSIATLTFIMSFAV
GLGPIPFVLIPEVSPPHAVSALSSMALSFNWVTNFFLSEQHGLETYLHFIRRLIVHSQQR
LTSVTPAFGGTDALTFRLLVSESQRIGRDPILADRFREGIDKGDGDIFRHFDLVRFVDRV
GLRPLERLVLASAFVSTPTRKELANQAASIIRLEFESAVLSICHTAPFENADLSLNSLAK
VMANVLSDPPSDAPVLDAQQRQALILAAQTKYGKDAISPILRRIFTHLSLPPGTSLVQAL
VQLGADVTSDPDLVRALLELFGFTEQNPPREGQVIDIVSTLGRLAVEGSPLCDVGALTRT
LASFHVKPSWPIVIKSFDRPDRHGVDTATLKFLISILLNAPRDVEPHAVTGFWETWNNPL
YQLRLLDALLSLPSDTFSFVSLPGHRIVTVDDVTIASPTIRALAANVQSHTWNSLELFQV
LVRLAGSDSVEIRACVREMLDKAIKISAELVHMGLLQVPDPKWNDIRLEYSRKLLSMFLA
GHPNHQLVFMRIWQINPGYLTTAFREFYDDNNLNITRILDVAQDLKILEALLEVQPFTFA
LDVAALASRREYLNLEKWLQDHVTRYDGEFLHSVIAFLEAKMDSEKACRLSETPMESRTM
PLNAHVVTVILRVLRSSTEHMFEGDVEACLEVRNTCLQIHPRLMNLIPGNETEPGFAVMS
YPADIEAEVDNIYKQMYDTATSIDDVINMLRRFKASKNPRDHELFSCMLHFLFDEYRFFQ
SDYPSRELALTAYLFGSLIRHQLIDYIPLGIAIRYIIDALGCAPHTNLFKFGMQALNQFE
FRLVEWRPLCETLLQIPHFVEARPDFAANIQHILATGGTTDHVDLQMLTLASSSEPVPDP
SPIFISIKADKIEEEIIPPPEELSDKILFIVNNLAPSNFDAKIEEMREQFVDDYSRWFAH
YLVDQRVSSEPNNHTLYLRFLDSLNRKDLSRYVLHETFVKAQAMLNAERTLQSGSDRGTL
KNVGSWLGTITLARDQPIKHKNLSFKDLLIEGYTSNRLIVAIPFVCKTLEPCARSKIFRP
PNPWLMAVVSLLAELYHHAELKLNLKFEIEVLCKALDINLDSIEATRVIRSRPTENFPDY
GGDLAPGVVGDGLMQDGVMLPPQNDNQRTINNHIEGILSALSLQVHIDPQLSPFNVNQAF
KRAVQLAVDQSVRDIIVPVVERSVTIAGISTRELVTKDYATEPNEEKLKKAGHLMAQKLA
GSLALVTCKEPMRTNLTTQLRQFLNNQGFTEQLVPEQVIHVLIRDNLEIACAAIEKVAME
RAVADVEDNFAVSIESRRRHRELRNPGPYYDPNTPHSSFALGLPEPLRIKSGGVQNVQAA
VYEDFVSDESMHGHREIMDRFQVFTRDLEAIMIQLPIQSLSALPPSHDVRHLVRQILYLA
VEASDRPHTPLIMSQAIVKKLYNTPSQLGREVYVALLEQLCHSFEEVAKEAIEWLLYAND
ERKYIAPVTIALLKSQLINIGVTDQQLAKSLSSDPRPSLLTYAAGLIRECLTADPPVASQ
HQFPYTIDVLDQISKAGKANEDVNRLLDDLRGVRRTPAVVDVIPRQPSANAETEQLRDKL
YVWFQQWVNIFQRSHSPEKSFVPFITQLTKQGILKVEDMSSLFFRVCAEASVNSYVKCVA
SNDFAYAFQALDAMSRLIVYIIKYHGDASGVNNDQAKVHYLTKILSIFVLVLANLHEEQG
AAFQQKPFFRFFSSLVNDLHSIENHLGPVYFHLLVAISDTYSSLQPIYFPGFAFSWMCLV
SHRLFMPKLLMSENREGWSAFHKLLVSLFKFLAPFLKDADLQNAAKDLYRGSLRLLLVLL
HDFPDFLSEYYFTLCDVIPQRCIQLRNIILSAFPPAIPLPDPNLRNQKFDSIPEMGPIPP
ILSDFSSGLKGGELRTHLEQYLLGRSSASFLLSLKDRLKSQGSEDATEAYNLSLINSLVM
FIGVSSVAQAKARSGSSLFVASDPGVVALQYLVTQLDDEGKHCLLSSMALHLRYPNAHTH
WFSSLMLHLFLEVMDDRFREIMTKVLLERFIVHRPHPWGALVTFIELLRNPKYEFWSKEF
VGIAPEVTVLLDSVRHNLS
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacttcgttttctcgttcgtgacagctattttcactgtcggtggcctcctaggt
agccttgttgcgaatatcttcatggatcgcctcgggcgcaaaggagcgtctcaagtgacc
gcactgtttcacatcgtcggtgcagggcttatgggtgttagcggttctgtcactactctc
agctttggcagattccttatcggtgtcggttcgggcataggcgtgttaactcagctagga
atcgtcctgggcattatgtccacacagatcgtcggatttcgatattcaacgccaactgag
tggcgtttcgtgcttttcttgtcctcagccattagctgcgtccagtttgtgaccggctac
atgattgttgagagccctgcctggttgggcatgcagaatagatccgaggagaagaagacc
gtttcggagcgtatatggcgagctaattccacccgtgctacaccctcaatggccagcgat
gaaaacccgttgttggaggacgtagaagcccggcgccctgaaacttcaacaaacacgaca
accgtgctacagttgttcttttcgcccgagcttcgtaagccattgatgattacctgcttt
gccatgatgtcgcaacaaatttctggtatgcggcatttagtcctttattatagcaacgaa
atcttgtcaaaatctttgcccgatttggggccatatgtctcccttggtatcaccgttgtg
aatgtcattatgacttttccaccaatttttctaatagagcgtgtcggacgcaagtctctc
ctagggatttctaccattggtgctctcgcctcacttgcttctatcggctttggcctcaac
aatgaccattccaccatgacaagcattgcaacgcttacatttattatgtcattcgcagtt
ggcctaggaccaattcctttcgtcttgatacctgaagtttctccgccccacgctgtttct
gccctgtcctcgatggcgctgtccttcaattgggtcaccaatttttttctttctgaacaa
cacggtctagaaacctacctgcacttcatacgtcgcctcatcgtacactcccaacaacgg
ctcacctcagttacccctgcattcggagggacagacgctcttacttttcggcttctcgtc
tcagaatctcagcgtatcggtcgtgacccgatccttgctgaccgttttcgcgaaggaatt
gacaagggagacggggatatttttcggcattttgacctggtgcgatttgtggacagagta
ggactacggccattggaacgtctcgttctcgcctctgcgttcgtttctacccccactcgg
aaagagctagcgaaccaagccgcgagcatcatccgtctggaatttgaaagcgctgttctc
tccatctgccatactgctcctttcgagaacgctgaccttagcctcaatagcctggcaaag
gtcatggctaatgtcctttctgatcctccttctgatgctcctgtattggatgcgcaacaa
cgccaagctctgattcttgccgcccagacaaaatatggaaaggatgccatttctcccata
cttcgccgtatcttcacccatctcagcctccctcctggtaccagccttgttcaagcgctc
gttcagcttggggcggatgttacaagtgaccctgatcttgtgcgggcactcttagaattg
tttggattcacggagcaaaaccccccccgcgaaggtcaagtaatagatattgtttctact
ctaggaaggttggctgtggaaggctctccgctatgcgatgttggagcgctcactcgtact
ttagcgagctttcacgtcaaacccagttggccgattgttatcaaatccttcgatcggccg
gatcgtcatggtgtagatacggcgactctgaagtttctgatttccattctgctcaatgca
cctcgagatgtggagccacatgcggtcactggtttctgggaaacatggaacaaccctctt
tatcagttgcgccttcttgacgctctcctttccctcccttccgatacattcagcttcgtt
agcctcccgggtcacagaatcgtaactgtcgatgatgtgactattgccagtcccaccatc
agggctctcgctgccaatgtccagagccacacgtggaattctcttgagctattccaagtt
ctagttcgtctcgctggttccgattcagttgaaatacgtgcatgcgtccgcgaaatgctg
gataaggccatcaagatcagcgcagagctagttcatatgggtttacttcaggttcctgat
cctaagtggaatgacattcggcttgaatattcacgcaaacttctctctatgtttctcgct
ggtcatcctaatcatcaattagttttcatgcgaatctggcaaattaatccgggttatctt
actactgcttttcgagaattctatgatgataacaacttgaatataacccggattctggat
gtcgcgcaggatctcaaaattcttgaggctcttttggaggttcagccatttacatttgcc
cttgatgttgctgctctagcttcgcgacgagaatatctgaaccttgaaaagtggttgcag
gatcacgttacccgatatgacggggaatttcttcactcagttattgcgtttttggaggca
aagatggacagtgaaaaggcatgccgcctttcagaaacccccatggaaagcagaaccatg
cctctaaatgctcacgttgttacagtcatcttacgggttctgcggagcagcaccgaacac
atgtttgaaggcgacgtcgaagcttgtttagaagttcgcaacacctgtctacaaatccat
ccgcggcttatgaatctgatccctggaaacgaaaccgagccgggatttgctgtcatgagc
tatcctgctgacattgaggctgaggtcgataacatctacaaacaaatgtatgacaccgca
acttccatcgacgacgttataaacatgctccggcgcttcaaggcctcaaaaaatccccga
gatcacgaacttttctcttgcatgcttcacttcctgttcgacgagtatagattttttcag
tcggactatcccagccgcgaattggctctcactgcctacctttttggttcccttatccgt
caccagctgattgattacattccccttggcattgccatccgctatatcattgacgcactc
ggctgcgctccgcacaccaatctgttcaaattcggtatgcaagccctgaatcagttcgag
ttccggctggtagagtggagaccgttatgcgagaccttgcttcaaatacctcattttgtg
gaagctcgacctgactttgcggccaacatccaacatatcctagctacgggggggactacc
gaccatgtggacttgcagatgttgactctagcctcatctagcgaacctgttcccgaccct
tctcccattttcatttccatcaaagctgataaaattgaagaagagatcattccgcctcct
gaagaactttctgacaagatattgttcattgtcaacaaccttgctccaagcaatttcgat
gcaaaaattgaggagatgcgtgaacaattcgtggatgattactctcgttggtttgcacac
tatctcgttgatcaacgcgtcagttcagaaccgaacaatcacactctatacctccgcttc
cttgattccctcaaccgtaaggacctctctcgttacgttcttcatgaaacttttgtaaaa
gctcaagcgatgctcaatgctgaacggactctccaatccggttctgatcgcggcacgctc
aaaaacgttggctcttggcttggaacaataactctggctcgagatcaacccatcaagcac
aaaaacttgtcattcaaagatcttttgattgagggttacacgagtaatcgtctaatcgtc
gccatccctttcgtttgtaaaactctggagccctgtgctcgatcaaaaatcttccgcccg
cccaatccttggttgatggctgtcgtcagccttcttgccgagctctatcatcacgccgag
ctcaaattaaatctcaaattcgaaattgaggttttgtgcaaagcgttggacatcaacctt
gattcgatcgaagcaaccagggtcattcgttctcgacctactgaaaatttcccagactac
ggcggggacctggcacccggtgttgtgggcgatggcctgatgcaagatggtgtgatgctt
ccgcctcaaaatgacaaccagcgcacgatcaacaatcacattgagggcatactgtctgcg
ttatcccttcaagttcacatcgatccccagctaagtccattcaacgtcaaccaagcgttc
aagcgagcagtacaacttgctgtggatcaatccgttcgcgatatcattgtaccagtggtg
gaacgctctgtcactatcgctggaatttctactcgggaactagtaaccaaggactatgca
actgaaccgaatgaggaaaagcttaagaaagctggtcatctcatggcgcagaagcttgct
ggaagtctggcactcgtcacttgcaaggagccaatgaggacaaatctgactacccaactt
cgccagttcctgaacaatcagggatttactgagcaattggtaccagaacaagtcattcat
gtgcttatacgagataacttggagattgcatgcgcggctatcgagaaagtagcgatggag
agggctgttgcagatgtagaagacaactttgccgtttcaattgagagtcgaagacgacat
cgggaactccgtaatccaggcccttactatgaccctaacacgcctcattctagcttcgct
cttggtcttccagaacctctccgtataaaatctggcggagtccagaatgttcaggctgcc
gtttatgaagattttgtatctgatgagagcatgcatggtcatcgggagatcatggaccgg
ttccaggtcttcactcgtgatcttgaggcaattatgatacaacttccaatccagagtcta
agcgccttaccgccaagccatgatgttcgtcacttggttcgccagatcttatacctcgca
gttgaggcttcagaccgcccacacacacccctcattatgtctcaagcaattgtcaagaaa
ttgtacaacacaccatctcaactcggacgggaagtttatgttgccctcttggaacaatta
tgtcattcgttcgaagaggtggcgaaggaagctattgaatggctgttgtatgctaatgat
gagcgtaaatatattgcgccggtcaccatcgctctgttgaaaagccaactcatcaatatt
ggcgttacggatcaacagcttgcgaagtctttatcttcggaccctcgccccagtctcctt
acctacgctgccggcctgattcgcgaatgcctcaccgccgatcctccggtggccagccaa
catcaatttccttataccattgatgttcttgaccagatatccaaggccggaaaagcaaat
gaagatgtaaaccgtctgttggatgacctgcgcggtgtacgacgcactcccgctgtggtt
gacgtcattcctcgtcaaccctctgcaaatgccgagaccgaacaattacgcgacaaactt
tacgtctggttccaacaatgggtcaacatcttccagcgttctcattcaccagagaaaagt
tttgtgccatttattacgcaattgactaagcaggggatactcaaagttgaagacatgtcg
tccctcttcttcagagtctgcgcagaggctagcgtcaacagctatgtcaagtgcgttgct
tcaaacgacttcgcttacgcctttcaagctctggatgccatgtcgcggcttattgtatac
atcatcaagtaccacggcgacgcctctggagttaataatgatcaagccaaggttcattac
ctgacaaagattttatctatctttgtactcgttttggccaacctccacgaggaacaggga
gctgcgttccaacagaagcctttcttcagattcttttccagccttgttaacgaccttcac
tctattgagaaccatctcgggcctgtctacttccatttgttggtcgctatcagcgatacg
tacagctcccttcaacccatttacttccctggatttgctttctcctggatgtgtctcgtc
tcccacaggcttttcatgcctaagctattgatgtctgagaatcgggagggctggtctgcc
ttccacaaacttctggtttcccttttcaagttccttgctccattcctgaaagacgccgac
ctacaaaatgctgctaaagatctttatcgtggtagccttcgacttcttctggttcttctt
cacgatttccccgatttcctgagtgaatattacttcaccttgtgcgacgtcattccccaa
cgctgcatccagttacggaacattattctcagcgctttccctccagctatcccccttcct
gatcccaatctccgcaatcaaaagtttgattcaattccggaaatgggtccgattccccca
atcctctctgatttcagttctggtctcaagggcggtgaattgagaacccatctggaacag
tatctacttggccgcagttcagcttcctttcttctatccctcaaggatcgtcttaagtcc
cagggatccgaggatgcgacagaagcatataacctctcattgatcaactcgcttgtgatg
ttcatcggtgtttcgtccgttgcccaagcgaaagctagaagtggatcctccctctttgta
gcgagtgaccctggagttgttgccttacaatatctggtaacacagcttgatgatgaagga
aaacattgcctcttgagctcgatggctttacatctgcgttaccctaatgctcatacccat
tggttcagttcactcatgcttcacttgttcctggaggttatggatgatcgcttccgagag
atcatgaccaaagtcctccttgaacgtttcattgttcatcgacctcacccttggggagct
ctagttactttcatcgagctgctacgcaacccgaagtatgaattctggtctaaggaattc
gttggcattgctcctgaagtgaccgtattgctcgatagtgtgcgtcataacttatcatga
DBGET
integrated database retrieval system
