Argiope bruennichi (wasp spider): 129968643
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Entry
129968643 CDS
T09870
Name
(RefSeq) SKI3 subunit of superkiller complex protein-like
KO
K12600
superkiller protein 3
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129968643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abru03019
]
129968643
Messenger RNA biogenesis [BR:
abru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129968643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_17
TPR_19
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_16
TPR_12
TPR_11
TPR_9
ARM_TT21_C
PPTA
TOM20_plant
TPR_6
HEAT_Nup120
ANAPC3
COG4_N
ANAPC8
Motif
Other DBs
NCBI-GeneID:
129968643
NCBI-ProteinID:
XP_055938713
LinkDB
All DBs
Position
5:107934052..107979589
Genome browser
AA seq
1503 aa
AA seq
DB search
MDAKEIKSSLKQAREAIKEKDFKAALKYCKSVLKSDKNNYNAWVFVGAAAQEIDQPEQAE
AAFKRAIEISPDQLLAWQGLCSFYEKHETKENIPELCSVYLKLLEMFTSDTDKKLEIYDK
LIALLRKQDDKTKLIKVLKSKLEMLQSANLDTYPMQKQIFKDTSGKTELSEAEKQMLSEA
LKTIISHEEFCDDDCKRIFTTCIEILYKAGDENYALSLALEVFKKFPQNSSCLEFLSRVA
MNLYIENGTIISHIDEISQRMLKCGNSSGLPLIFEGFCAFVSKDYIGAIQKLKTGLKSLE
YYVQGWYFLSKSQYLLHRYSDSERSAKTGINVALESKLSSVIVGKFYLLLGQSLAGREIW
DSALKALDKCASYLGQSKELLITFCFTLLKMEQVSKTEQMCQDLKDKFPDDPEVLQVEGY
TLLLKSQYDEALQKLRLSLSMAESAFTLHLIGLVLWESQQRDKAFKVFLKAVELDPYLAK
NFLYLGHYYQNHLHDKSKACLCYQKAFDLDNTDTEIGMSYSKILQDLGKEEDNMRVLKVI
TERANLGSCKWAWTQLGLCQLKMNLISDAIFSLQNALRADPNSSSGWECLADAYLKRGSY
ESALKAFEKVVELNPKAMYPLYQIATIQKMRGLFTDGIEKFKNLLDIVPTYVPALIGLAE
TYILAAKKALSECLYGLARDCCQETLNTLAKAAGSKHGLSSLWKLAGDACSIPFGLDDEW
FPITVPYELHQETEKETVSCNKSQLLTFGSKFFGRALQIKDSVSTLWHDLGVNCHLQSML
ATDRNEKVNFAKKAFICFQKAVSLCPGYEPHWTALGVIAVSEELEDWAFGQHALIKSLSL
NKFNAETWTNLGVLYLEKENIELAHLAFKMAQSAEPTYPLSWIGQAFIADKVKHSETVDL
YRHATTLGSHNEALIGYSRVICETLLYTTNKESFSYKYNIEQMNAVLLASDCAVKFVANN
YNCAEAFNILGMLLERQGIYNASLKAYERALKLLEARDEKDFVELVRANYARILCVVGDI
KGAIKEFLLLKKVDVSIICGFALAMYKDQQYEQSLKLLGQAFEKSKNPSDQSHIKVAMAM
VAGKLSGPDAPNPLVLLVESAKISPKSVPGLLALHARGILKEESKLIMAAQKELQPYKYK
KEYAASAAFLWAAQAYLTKGVKSARNELLKFIHCFPTLQQTWMQTACCLLQWDTKYADVA
ATCTKIGIFHGGCKEQASQIYALCQMAKGSRRGALSAAQKAVHINPEKLSNWATLAAACH
VADLDQKHVGWMFSFVRKLAKEQGVKSDFLGWFIVMEIFHHINCGNMTVAGALTNQALSI
SAFSSEIQSCLQVLDAVVKVYSNNGNLQPLFLAVKENPKSFFAWNVLSQLLIASGSTMEA
EKTISHFVVTAEKIFPNWTVYPLLQLAMLSYKAMHTNPDEKEKWLKLGEEVSGKAVHLAP
SSQAARFLQGIIALEAGNSNLARRSFEKVLSSPSVNEAKWMESIASEVLELKNIKRKSKD
QGS
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagaaatcaaatcctctcttaagcaagccagagaagcaattaaagaaaaa
gattttaaagcagctttgaaatattgcaaatctgttcttaaatcagataaaaacaattac
aatgcttgggtgttcgtcggagcagcagctcaagaaattgatcaacctgaacaagccgaa
gctgcctttaaaagagctattgaaatttcacctgatcaactattagcctggcagggcctg
tgtagtttttatgaaaagcacgagacaaaagaaaatattcctgagctttgttctgtgtat
ttaaagttacttgaaatgtttacatcagatacagataaaaaattagaaatatatgataaa
ctaattgctcttctcagaaagcaagatgataaaacaaaattgatcaaagttttaaaatca
aagctggaaatgctgcaaagtgccaatctagatacctatccaatgcaaaaacaaattttt
aaagatacatcaggcaaaacagaactatcagaagctgaaaagcagatgttgagtgaagct
cttaaaacaataatttctcatgaagaattctgtgatgatgattgtaaaagaatttttacc
acttgtattgaaattttgtataaagctggtgatgaaaactatgcattgagtttagcttta
gaagtattcaaaaaatttcctcaaaacagcagttgtttagaatttctatccagggttgcc
atgaatttatacattgaaaatggtacaattattagccatattgatgaaatttcacaaaga
atgctcaaatgtggaaattctagtggcttgcctttaatttttgaaggattttgtgcattt
gtatccaaagattatattggagctatacaaaagttgaagacagggcttaagtccttggaa
tattatgttcaaggctggtatttcctgtcaaaatcacagtacttgttacatcgatattca
gattctgaaaggagtgccaaaacaggtattaatgttgcacttgaatcaaaactgtcctct
gttattgttggaaaattttatttgcttcttggacagtctcttgctggaagagagatatgg
gattctgcattgaaagctcttgataaatgtgcatcatacttaggacagtcaaaagaatta
ttaattaccttttgtttcactcttttgaaaatggaacaagtttctaaaactgaacagatg
tgccaggatttaaaagataaatttccagatgatccagaagtattgcaggttgaaggatat
actttacttctgaaaagtcaatatgatgaagctttacaaaaattaaggctgtcactatca
atggctgagtctgcatttacactgcatttaattggtcttgttctttgggaatcccaacaa
agagataaagcatttaaagtttttcttaaagctgttgagttagatccttacctggcaaag
aattttttgtatcttggacattattatcaaaaccatttacatgacaaaagtaaagcttgc
ttatgttaccaaaaagcatttgatttagacaatactgatactgaaatagggatgagctat
agtaaaatcttacaagatttaggaaaggaggaggataatatgagagttttaaaagtcatt
actgaaagggctaatcttggaagttgtaaatgggcatggactcaacttggcctttgtcaa
ttaaagatgaatcttattagtgatgccattttctctttgcaaaatgctctaagagctgat
ccaaatagcagttctggttgggaatgtttagctgatgcatatttgaagagaggtagttat
gaatctgcattgaaagcgtttgagaaagtcgttgaattgaatccaaaagcaatgtatcct
ttatatcagattgcaacaatacagaaaatgagaggtttgtttacagatggaattgagaag
ttcaaaaatctacttgatatagttcctacttatgtgcctgctttaataggtttggctgaa
acatatattttagcagctaaaaaagccctcagtgaatgtctttatggacttgccagagat
tgttgtcaagaaactttgaatactctagcaaaagctgctggttccaaacatggtttgtca
tctctttggaaactggctggagatgcttgctctataccatttggtttggatgatgaatgg
tttcctattactgttccatatgaacttcatcaagaaacagaaaaggaaactgtctcttgc
aacaaatctcagttgttgacatttggttcaaagttttttggaagagctttgcaaatcaaa
gatagtgtgagtactttgtggcatgatttaggtgtgaattgccacttacaatccatgttg
gctactgatagaaatgaaaaagttaattttgctaagaaggcttttatttgttttcaaaaa
gctgttagcctctgccctgggtatgaacctcattggacagcactgggagtaattgcagtc
agtgaagaacttgaagactgggcttttggtcaacatgcactgattaaatcgcttagtctc
aataagtttaatgctgagacatggactaatttaggagttttatatctggaaaaagaaaat
attgagcttgctcatttagcctttaaaatggcccaatcagccgaacctacctatccctta
agttggattggacaagcatttattgctgataaagtgaaacattctgaaactgtagatctt
tacaggcatgccactactttaggctctcataatgaagctctgattggatattctcgagta
atatgtgaaactcttctctatacaacaaataaggaatctttttcttataaatataacata
gagcagatgaatgctgtcttgctggcatctgattgtgctgttaagtttgtagccaacaat
tataattgtgcagaagcattcaatatcttgggtatgctactagagagacaaggaatatat
aatgcttccctgaaagcttatgagagagccttgaaattattggaagccagagatgaaaag
gattttgtagaacttgtccgtgcaaattacgcaagaatattatgtgttgtgggtgatata
aaaggtgctattaaagaatttcttttgctgaagaaagtagatgtttcaatcatctgtggt
tttgccctagccatgtacaaggatcagcagtatgagcaatctctaaagttgttaggacaa
gcatttgaaaaatctaaaaatcctagtgatcagtcccacattaaagttgcaatggctatg
gttgctggaaaattgtctggacctgatgctccaaatcctttagtgttgcttgttgaaagt
gctaagatttctcccaaatctgttcctggattattagcattgcacgcaagaggaatatta
aaagaagaatctaaattaataatggctgctcaaaaagaactccaaccgtacaagtataaa
aaagaatatgctgcttcagcagctttcttgtgggcagctcaagcctacttaacaaaaggc
gtgaaatctgctcgtaatgaattgttgaaatttatccattgcttcccaacacttcaacaa
acttggatgcaaactgcttgctgtctgcttcagtgggacaccaaatatgcagatgttgca
gctacttgtacaaaaattggaatcttccatggtgggtgcaaagagcaggcatctcagata
tatgctctgtgtcaaatggcaaaaggatctaggagaggtgccttatctgctgctcaaaag
gctgttcacattaatccagaaaaattgtcaaactgggctaccttagcagctgcatgccat
gttgctgatttagatcaaaaacatgttgggtggatgtttagttttgtaagaaaattagct
aaagagcaaggtgttaaatctgatttcttaggctggtttattgtgatggaaatatttcac
catattaattgtggaaatatgactgttgctggtgcattaacaaaccaagctctctccatc
agtgctttcagttcagaaatccagtcctgcctacaagtattagatgcagttgtgaaagta
tattcaaacaatggtaatctacaacctctctttttagctgtaaaggagaatcccaaatca
ttctttgcttggaatgttctgagtcagcttctgatagcttctggaagcactatggaggca
gagaagaccatctctcattttgttgtcactgcggagaaaatctttccaaattggactgtt
tatccattacttcagctggccatgttatcttacaaagccatgcatacaaaccctgatgaa
aaagaaaaatggctgaagttgggtgaagaagtatctggtaaagctgttcatttggcccct
tctagtcaagctgctcgattcttacaaggaattattgctttggaagctggaaattcaaat
ttggcaagaagaagttttgaaaaagttctctccagtccatctgtaaatgaagctaagtgg
atggagagtattgccagtgaagtgttggaactgaaaaatataaaaagaaaatcaaaagat
caaggttcttga
DBGET
integrated database retrieval system
