Amedibacterium intestinale 9CBEGH2: A9CBEGH2_09350
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Entry
A9CBEGH2_09350 CDS
T06427
Symbol
sigK
Name
(GenBank) RNA polymerase sigma factor
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
absi
Amedibacterium intestinale 9CBEGH2
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
absi03021
]
A9CBEGH2_09350 (sigK)
Transcription machinery [BR:
absi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9CBEGH2_09350 (sigK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_23
MarR
Trp_repressor
HTH_31
HTH_28
MarR_2
HTH_24
HTH_38
HTH_19
Sigma70_r4_2
HTH_29
Motif
Other DBs
NCBI-ProteinID:
BBK61995
LinkDB
All DBs
Position
complement(926717..927415)
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AA seq
232 aa
AA seq
DB search
MLSAVFEVLQHALCYVGYVRNNSFAKPLSKEEETDCIERLSKHDEQAREKLIEHNLRLVA
HIVKKYDIKKEQSEDLISIGTIGLIKAIDSFKPEKGHKLTTYASRCIENEILMYLRSSKN
YFQNVSLNDPIATDKDGSEITLLDAIAAPVQRSVVDSIVLEDRVIKLKKYLHVLDPRELE
IITRRFGLFKQEEQTQREIAKEMHISRSYVSRIEKRAFMKIYREFQKEEKNV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtgcagtttttgaagttctccaacatgcactatgttatgtaggatatgtacga
aataattctttcgcaaaacctttatcaaaagaagaagagacggattgtatagaacgtttg
tcaaaacatgatgagcaggctagggaaaaactaattgaacataatcttagactggtcgca
catattgtaaaaaaatatgatataaagaaagaacaaagcgaagatttgataagtattgga
accattggcttgattaaggcaattgattcttttaagcctgaaaagggacataaacttaca
acctatgcatcacgctgtattgaaaatgaaattttaatgtaccttagaagttctaaaaat
tattttcaaaatgtatccttaaatgatccgattgcgacagataaagatggaagtgaaata
acgcttctagatgctattgcggctcctgtgcagcgaagtgttgttgattcgatcgtactt
gaagatagggttataaagttgaagaaatatcttcatgtattagatcctagagagttagaa
atcatcacacgaagatttggattatttaaacaggaggaacaaacacaaagagagattgcg
aaagaaatgcatatttcaagatcatatgtatctcgaatagaaaaacgtgcttttatgaaa
atttatcgtgaatttcaaaaagaagagaaaaatgtataa
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