Aminipila butyrica: Ami103574_13220
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Entry
Ami103574_13220 CDS
T06474
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
abut
Aminipila butyrica
Pathway
abut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ami103574_13220 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abut03400
]
Ami103574_13220 (uvrA)
DNA repair and recombination proteins [BR:
abut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ami103574_13220 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ami103574_13220 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_18
ATPase
APS_kinase
AAA_23
NACHT
MMR_HSR1
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
QIB70193
UniProt:
A0A858BW78
LinkDB
All DBs
Position
complement(2780004..2782847)
Genome browser
AA seq
947 aa
AA seq
DB search
MTNEIIIKGANEHNLKNIDITIPRDQMVVLTGLSGSGKSSLAFDTIYAEGQRRYMESLSS
YARQFLGQMEKPDVDYIEGLSPAISIDQKTTSKNPRSTVGTVTEIHDYLRLMYARIGIPH
CPICQREIKSQSVDQIVDSLMLLGDGTRVTMLAPVIRERKGEHEKILERIRKEGFTRARI
DGKQVNITEEEVKLEKTFKHTIEIVVDRIVIKEGAESRLAEATELSIAHGNGLVVTQIQE
KDQEEIYDRIFSTKLACPEHGVSIEELEPRMFSFNSPFGACPECNGLGFTQRIDPELIIE
QPELSIIEGCLSNIFASMDVTGSFYRQMVDALAEDHGVDLNTPYNKLPAKFKKELLYGTG
SRHLKYYYKSKNNNSESYRDHPFEGVINNLERRYQETNSEYMKDRMLQYMRITPCEQCGG
KRLKPEVLAVTVGGRNLAELSDMPIRDAIAFVSGLKLTSKEEMIAHQILKEIKSRLGFLV
DVGLDYLTLSRASGTLSGGESQRIRLATQIGSSLVGVLYILDEPSIGLHQKDNEKLLKTL
RHLTDIGNTLLVVEHDEDTMYAADHVVDIGPGAGIHGGEVVAQGSIEEIKKCQRSLTGQY
LSGAKVIRVPEKRREGNGLSIRITGARENNLQNVDVDIPLGKLVCVTGVSGSGKSSLINE
ILYKGLAKKIYRAKDRPGAHDDILGMDNVDKIIDINQAPIGRTPRSNPATYTGVFTHIRD
LFAQLPESKVRGYEKGRFSFNVKGGRCEACGGDGIIKIEMHFLPDVYVPCEVCKGRRYNR
ETLEVKYKGKSIFDVLDMNVSEAAEFFQHIPSISRQMETLEEVGLGYIKLGQPSTQLSGG
EAQRIKLASELSKRSTGKTMYILDEPTTGLHFADVDKLIQVLEKLVDAGNSVVVIEHNLE
VIKMADYLIDLGPDGGNRGGTIVGTGTPEELAANKDSYTGAFLKKLL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgaaattattataaaaggtgctaatgagcacaatctaaaaaatattgacatt
actattcccagagatcagatggtggttcttaccggcctgtccgggtcgggaaaatcctcc
ctggcctttgataccatctatgcggaagggcagcggcggtacatggagagcttatcctcc
tacgcccggcagtttttaggacagatggagaaaccggatgtggattatatcgagggcttg
tcaccagctatatccatcgatcagaagacgacgagtaagaaccctcgttctacggtggga
acggtcacagagattcatgattatctgcgtctgatgtatgccagaatcggtattccacat
tgcccaatctgtcagcgggaaatcaagagccaatcggtagaccagatcgtagatagttta
atgctgttaggcgatgggactagagtgaccatgctggcgccggttatccgggagcggaag
ggcgaacacgagaaaattctggaacggattcgcaaggaaggctttaccagagcccgaatt
gatggtaagcaggtcaacataacagaagaagaggtcaagttggaaaagacctttaagcat
accatcgaaatcgtggtggatcgaatcgtcattaaagaaggtgcagaaagccggctggca
gaggctaccgagctgtctatcgcccacggaaatggcctggtggtcactcagattcaagaa
aaggatcaggaagaaatctatgatcggatattttctacaaagctggcctgcccggaacat
ggcgtgagtattgaggagctggaaccgagaatgttttccttcaacagtccttttggggct
tgcccggaatgcaatggtttaggtttcactcagcgcatcgacccggagctgattattgag
cagccggagttgagtattatagagggatgtctaagcaatatttttgcttccatggatgtg
actggcagcttctaccggcagatggtggatgctttagccgaagatcacggggtggaccta
aatacaccatacaacaagcttcctgccaagttcaaaaaagaactgctttatggtacaggc
agcagacatctgaaatactattataagagtaagaataataattccgaatcttatcgggat
cacccttttgagggcgttatcaataatctggagaggcggtatcaagagaccaattctgaa
tatatgaaagaccggatgctgcaatacatgcgcatcaccccttgtgaacagtgcggcggt
aagcggctgaagccggaggtgctggccgtaaccgtaggcggcaggaatctggccgaactg
tcggatatgccaattcgggatgccatcgcttttgtatcaggattgaaactgaccagcaag
gaagaaatgattgcgcatcagattctcaaagagattaagtcacgcctgggtttcttagtg
gatgtagggctagattatttgacgctttctcgggcttctggcaccttgtccggcggcgaa
tcccagcggattcggctggccactcagattggttccagtctggtaggcgtgctgtatatt
ttggacgagcctagtatcggtcttcatcagaaggacaatgaaaagctgttgaaaacctta
cggcatttgacggacatcggaaatacactgttggtggtagagcacgatgaagacaccatg
tatgcggcggaccacgtagtggatattggtccaggtgcaggtattcacggtggtgaagta
gtagcccagggcagcattgaggaaatcaaaaaatgccagcggtctctgacgggtcagtat
ttatctggggctaaggtcattcgggtgccggagaagcggagggaaggcaatggtctgtct
attcgcatcaccggggccagggaaaataacctgcaaaatgtagatgtggatattcctctg
ggaaaactagtttgtgttaccggggtttccggttccggcaaaagcagtttgattaatgag
attctctacaaaggtttggcaaaaaagatttaccgggccaaagaccgaccgggagctcac
gacgatattctgggtatggataacgtggataaaatcatcgacatcaatcaggcgcctatt
ggacggacgcctcgctccaatccggctacgtatacaggggtgtttacccatattcgagac
ttgtttgctcagctgccggaatctaaggttcgaggatatgaaaagggccgtttcagtttt
aatgtaaaaggcggacgatgtgaagcctgcggaggggacggcatcatcaaaattgagatg
cacttcctgccggatgtatatgtgccttgcgaagtctgcaaaggccgaaggtataaccgg
gagaccttggaggtcaagtacaagggaaaaagcatttttgatgtgttggatatgaatgtg
tctgaggcagcggaattctttcagcatattcctagcatctctcgacagatggaaacctta
gaggaggtggggctgggctacattaagctgggccagccatccactcagctgtcaggaggc
gaggctcagcggattaagctggcttcggagctgtcgaaaagaagcaccggcaagaccatg
tacattttagacgagcctactaccgggctacactttgctgatgtggacaaactgattcag
gtgttggaaaagctggtggatgcaggaaatagtgtggtggtcatcgagcacaatctggaa
gtcatcaagatggcggattaccttattgatttaggtccggacggcggaaaccggggaggc
acaattgtcggtactggaacaccagaggagttggccgctaataaggattcttatacaggg
gccttcttaaagaaactcctataa
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