Agaricus bisporus var. bisporus H97: AGABI2DRAFT198370
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Entry
AGABI2DRAFT198370 CDS
T03140
Symbol
AGABI2DRAFT_198370
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AGABI2DRAFT198370 (AGABI2DRAFT_198370)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abv03009
]
AGABI2DRAFT198370 (AGABI2DRAFT_198370)
Ribosome biogenesis [BR:
abv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AGABI2DRAFT198370 (AGABI2DRAFT_198370)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
BAT
Motif
Other DBs
NCBI-GeneID:
18083659
NCBI-ProteinID:
XP_006454787
JGI:
Agabi_varbisH97_2_198370
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MLPDRRKDSHATSFAVHRCRFVDYAPSAVTALAFPPSPLPAVNRTRRKTTGKKPLRYGTL
AVGHANGNVDLCEWVGSERSVQCSQAWVVRKTMPGPYPSKVDSLTFVIRYPDDLDSDDIP
SVSDLRLFSSGGGSELLEWNLDLSCVKRTIGSQGGTIWCVAANPASTFLALGCEDGSVQL
LSVANDTLTHHSRFDRVSGRILSIAWGPPVPQPKSQNSNEDDADSDSEDEDEWKDEWLVI
GCSDSSLRKWDARTGRPLQRMAVDKIRGERTLVWAVGILGDGTIVSGDSLGNVKFWDPRT
CTQLHSFQAHGADVLTLTINPEGKSVYTSGVDQKTVQFSLVQTNSSSSTSSRWAQTASRR
MHAHDVRAQVSWPPYTPLPKAYKRTYPMDIAPILASGGLDMSIVLSPAALPESTVTKVIN
PLVTSTDATFGDAYHRRITYTVGNAIRVSRKQRLMLCLREAGLSVWRILKKPQDEMVDQL
EVDEPEPWNGGWEKILDMELKVTGNLVAGEISEDGRWLAVSDMYEAKLFSLCSDDNGKVS
VKRIKGFPSLIYSSIPNASSRTSLGAITLRFTPDSSKLVLCTAQTSYILILDLTHETPRL
IRRFEHHRLKETVVGDRVVKSLKQPKQLNGALINGNHVDGEDVDMEDVEASVSGDATSGG
EDSDGDDDPNLTADTIPNISRITISPDGQWLATSDDQRHTHIFNLDSISHHCLLPTFPLH
VSCFAFSPANPNVLFLAFPDNTLQVYDAEARQFPSWSKNLSLSSFSPSPIAKKLVTLHDA
ILGISFPPPPLLAVSDDMDPAKKDTQQKEDDGGKSPYALLWGANWLIKLPLSLSTTGGHS
KFSRKRKSPQQDQADTQTTTEESLTNASSRLVTHYRPILHVDFLDDGELVIVERPLVDVL
RTLPPAYFKHKYGSS
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgataggcgcaaagatagtcatgcaacaagcttcgctgtccaccgctgccgc
tttgtcgattatgcaccttctgcggtgacggcactcgcgttcccgccctcgccattacct
gcagtcaatcgcacaagaagaaaaacaacggggaaaaagccattgcgatacgggactctc
gctgttgggcatgcaaatggaaatgtagatttgtgtgaatgggttggctccgagcggagt
gtgcaatgttcacaagcttgggttgtcagaaagacaatgccaggtccttatccctcaaaa
gttgactctctaacttttgtaattcgctatcctgatgaccttgattccgatgacatccct
tcggtatcagacttgcgattgttcagctctggaggaggaagtgaactgctcgaatggaat
ctcgatctttcttgtgtgaagagaacaattggttctcagggtggcacaatctggtgtgta
gcagccaacccagcatccacctttcttgcattgggttgtgaagatggatcagttcaatta
ctttcagtggcgaatgacactctcactcatcatagtcgctttgatcgggtttctggtcgg
attcttagcattgcttggggaccacctgtgcctcagcctaagtcccagaattcaaatgaa
gacgatgctgacagtgattctgaagatgaagatgagtggaaagatgaatggctcgtaatc
ggttgttcagatagcagtcttcgaaagtgggatgcgcgaacaggcagaccactccaacgt
atggcagtggacaagattcgaggtgaacggacacttgtttgggctgttgggattctgggt
gatggcactatcgtctcaggcgattctctggggaatgtcaaattctgggatccacggaca
tgcacacaattacattcctttcaagctcatggcgctgacgttctcactctcaccatcaac
ccggaaggcaaatcagtttatacatccggggtagaccaaaagactgttcaattctcactt
gtccagacaaattcatcgtcatctaccagcagtcgctgggcgcaaactgcttcccgtcgt
atgcacgcgcatgatgtacgtgcacaggtatcatggccaccatacacaccccttcccaag
gcgtataaacgcacttatcctatggacattgcaccgattctcgcttctggaggtcttgac
atgtctattgttctcagccctgcagcccttcctgaaagtactgtgacaaaagttataaat
cccttggttacaagtacggatgccacttttggtgatgcatatcaccgtcgtatcacgtat
accgttggcaatgccattcgtgtgtcgagaaaacaaagattaatgttgtgcttgagagag
gcagggttgagcgtttggcgaatcctaaagaagccccaggatgagatggtggatcaatta
gaggtggatgaacctgaaccttggaatggaggttgggagaagatactggatatggagctc
aaagtgacgggcaacttggtcgctggagaaatctctgaagatggacgatggttagcggtc
tcagatatgtatgaggcaaaactgttttctctgtgctcagatgataatggcaaagtttca
gtaaaaagaatcaaaggctttccctccctcatttactcaagtattcccaatgcctcctcg
agaaccagtctcggtgctatcacattacgattcacaccggactcttcaaaactcgttttg
tgcaccgcgcaaacatcatatatcctcattctcgaccttactcacgagacacctcggctc
attagacggttcgagcaccacaggctaaaggaaaccgttgttggagaccgcgtcgtaaaa
tctctcaaacaaccaaaacaactgaatggcgccttgattaatggcaatcatgtagacgga
gaggatgtagacatggaagatgtcgaagcaagtgttagtggagatgctacaagtggagga
gaagatagcgatggcgacgacgatccaaatttaacagcggataccatacccaacatctca
cggataactatcagtccagatggccagtggctagccacctctgacgaccagcggcatacg
catatattcaacttggactcgatttcccaccattgtctccttcctacattcccgctccat
gtatcatgcttcgccttttcgccagcaaatcccaatgttctcttccttgcttttccagat
aatacattacaagtctatgacgcggaggcccgtcaattcccatcatggagtaaaaactta
tcgctttcctcgttttcaccttctccaattgccaaaaagcttgtgacgctccatgatgcc
atccttggtatctctttccctccccctcctctactggctgtttcagatgacatggacccc
gcgaagaaagacacgcaacaaaaggaagatgatggagggaaatcgccttatgccttgttg
tggggtgccaattggttgattaaacttccattatcgttatctaccaccggtggtcattca
aaattcagtagaaagcgaaaatctccgcaacaggaccaagccgatacacagacaacgacg
gaggagagtctgaccaatgcttcgagtaggctggttacacattatcggcctatcctgcat
gttgatttccttgacgatggagaacttgtgatcgttgagcgacctcttgtcgacgtactc
agaacactacctcctgcttatttcaagcacaaatacgggtcatcatag
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