Acinetobacter baumannii 1656-2: ABK1_3564
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Entry
ABK1_3564 CDS
T01819
Name
(GenBank) SsDNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abx
Acinetobacter baumannii 1656-2
Pathway
abx03410
Base excision repair
abx03430
Mismatch repair
abx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABK1_3564
03430 Mismatch repair
ABK1_3564
03440 Homologous recombination
ABK1_3564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abx03400
]
ABK1_3564
DNA repair and recombination proteins [BR:
abx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABK1_3564
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABK1_3564
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABK1_3564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ADX05198
LinkDB
All DBs
Position
complement(3773304..3775004)
Genome browser
AA seq
566 aa
AA seq
DB search
MTKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVA
LMDQAIDEQKKIVIVGDYDADGATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAE
LAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHHLTTKETPLAEAVVNPNQLGC
EFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILV
DAGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLL
ADTMETAYPIAQQLNQLNIDRRQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQG
VIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVHIRDTIEQVAEQHPELVSHFG
GHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIEQL
GPWGQKFPLPQFEGYFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHV
HLVYEIDRNVFNGNVSLQLRIVHLNQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatacaaattaaacaaagacctttattgacacgccctgaacagtttcagggc
gtgcctccgtttattgccgaaattttggcaagacggggcgtacaatccgagcaagaacta
gagttaaagcttaagaatttactggctcctgaactcaaggggttggatgctgctgtagca
ttaatggatcaagccatcgatgagcagaaaaaaatagttattgtgggggactatgatgct
gatggcgcaaccagcactgctttaatgatgctcgtgcttcgcgatatgggagcacaagtc
gactatctggtaccggatcgttttaaatatggctatggacttactcctgccattgctgag
cttgctcatcacacctatcaacccgatctattaattacggtagataatggaatttctagc
catgctggtgttgatgcagcacatgccctaggcatgcaagtgattattactgatcatcac
ttaacgactaaagaaacaccacttgcagaagcagttgttaatccaaatcaattaggctgt
gagtttccaagtaaggcacttgccggtgttggcgttgctttttatgtacttgccaatttg
gcgagtctacgcaatagacagggtaaaagcacaagtaaagtgactcaatatttagattta
gtcgctttgggaacttatgccgatgttgctgttttggattataacaaccgtattttggtt
gatgccggtgtaaaacgtattcagcaacatcagtgtcgagtgggaatcttagccttactc
gatatcgctggtcgggaagctacttcaatacgtgctcaagatttaggttttgtgctcgga
ccgcgcattaatgctgctggacgtatggagagtatgcgtattgggatcgagtgtttatta
gctgacacgatggaaactgcataccccattgctcagcaattaaatcagttaaatatcgat
cgccgtcaaattgaaggggagatgaagcaacaagctttatctgctttagacagtttacaa
ctctcacaacaagatattcccgcggcgcttgttctgtttgaagaaaactggcaccaaggt
gtcatcgggattgtcgcgggacgtttaaaagaacagtttcatcgcccaacgattgtgttt
gctccagatgaagatggtattcatattaaaggctcagcacgttccattgatggggtgcat
attcgagataccattgaacaagttgccgaacaacatcctgagctggtgagtcattttggt
ggacatgcggcagcggcaggcttaacgattcgtaaagaaaactttgaagcttttaaaacc
gtatttaatgattgtgtagctgctatggatgaatcaatctttcaagcgacattatggacc
gatggtgagctacctgtctctgctttgcaattagataccttaaactggattgagcaatta
ggtccgtggggacaaaaatttccactgcctcaatttgaaggatattttaaagttatcgat
tttcgttggctcaaagagacacatttaaagcttagattagcgatagaccaatatagtttc
gatgctattgcttttaatgcagcaggtcgcttcgagtttgatccgatgcgagaccatgtg
catttggtttatgaaatagaccgtaatgtctttaatggtaatgtgagcttacagctacgc
attgtgcatttaaatcaataa
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