Amycolatopsis carbonis: QRX50_04300
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Entry
QRX50_04300 CDS
T10496
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acab Amycolatopsis carbonis
Pathway
acab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QRX50_04300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acab03021
]
QRX50_04300
03400 DNA repair and recombination proteins [BR:
acab03400
]
QRX50_04300
Enzymes [BR:
acab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QRX50_04300
Transcription machinery [BR:
acab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QRX50_04300
DNA repair and recombination proteins [BR:
acab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QRX50_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WIX80025
UniProt:
A0A9Y2IIZ1
LinkDB
All DBs
Position
complement(876966..880469)
Genome browser
AA seq
1167 aa
AA seq
DB search
MAVSPANQATAATTSAVSRSESTGIPGAPKRVSFAKIREPLNTPNLLDVQLQSFQWFTGD
EAWFERRVNEGDENPVGGLEEVLNEISPIEDFSGSMSLSFSAPRFDEVKASIEECKDKDM
TYAAPLFVTAEFVNNNTGEIKSQTVFLGDFPVMTDKGTFIINGTERVVVSQLVRSPGVYF
DSSVDKTTDKDVFSVRVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEA
IRERFSFSETLLATLEKDHTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKPKRYD
LAKVGRYKVNKKLGLDTPYDTGTLTEEDIVSAIEYLVRLHAGEDKMTSVSNVEVPVETDD
IDHFGNRRLRTVGELIQNQIRVGLSRTERVVRERMTTQDVEAITPQTLINIRPIGAAIKE
FFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLCSYARVNPFGFIETPYRKVVEGQVTDQVDYLTADEEDRFVKAQANAPIT
DDGHFVENKVLGRRKGGEVELIDPLEIDYMDVSPRQMVSVATAMIPFLEHDDANRALMGA
NMQRQAVPLLRNQAPYVGTGVELRAAVDAGDVLVAEQAGVVEELSADIITIMHDDGTRKS
YGLYKFRRSNHGTCFNHRPIVDEGDRVEKGQVIADGPSTENGEMALGKNLLVAVMPWEGH
NYEDAIILSERLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLADLDERGI
IRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIG
IRVFSREDDDELPPGVNELVRVYVAQKRKIQPGDKLAGRHGNKGVIGKILPAEDMPFMED
GTPVDIILNTHGVPRRMNIGQILELHLGWLASQGWTIEGNPDWAKNLSEELYDVAPNTNT
ATPVFDGAKEEELTGLLGATKPNRDGERMVKENGKATLLDGRSGEPYPYPVAVGYMYILK
LHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIK
SDDVVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDSDD
EDLERAAANLGINLSRNESPSVDDVVH
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctctcccgcgaaccaggccactgctgcgaccacctcggctgtatcccgctcg
gagtccacgggtatccccggcgcgcccaagcgggtctccttcgcaaagattcgcgagccc
cttaacacccccaacctgctggacgtgcagctccagtcgttccagtggttcaccggcgac
gaggcgtggttcgagcgccgcgtcaacgaaggtgacgagaacccggtcggcggcctggaa
gaggtcctcaacgagatctccccgatcgaggacttctcgggttccatgtcgctgtccttc
tccgccccgcgcttcgacgaggtcaaggcctcgatcgaggagtgcaaggacaaggacatg
acctacgcggccccgctgttcgtcacggcggagttcgtcaacaacaacaccggtgagatc
aagagccagacggtcttcctcggcgacttcccggtgatgacggacaagggcaccttcatc
atcaacggcacggagcgggtcgtcgtgtcccagctcgtgcgttctccgggcgtgtacttc
gacagcagtgtcgacaagacgaccgacaaggacgtcttcagcgtgcgcgtgatcccgagc
cgcggcgcgtggctcgagttcgacgtcgacaagcgcgacaccgtcggtgtgcgcatcgac
cgcaagcgccgccagccggtcaccgtgctgctgaaggcgctgggctggaccaccgaggcg
atccgcgagcgcttctccttctcggagacgctgctggccaccctcgagaaggaccacacc
gccggcaccgacgaggcgctgctcgacatctaccgcaagctccgtccgggcgagccgccc
acgaaggagagcgcgcagacgctgctggagaacctgttcttcaagccgaagcgctacgac
ctggccaaggtcggccgctacaaggtcaacaagaagctcggtctcgacaccccgtacgac
accggcacgctgaccgaagaggacatcgtctcggccatcgagtacctggtccggctccac
gccggcgaggacaagatgacgagcgtgtcgaacgtcgaggtgccggtcgagaccgacgac
atcgaccacttcggcaaccgccgcctgcgcacggtgggcgagctgatccagaaccagatc
cgggtcggcctctcccgcaccgagcgtgtcgtgcgtgagcgcatgaccacgcaggacgtc
gaggcgatcacgccgcagaccctgatcaacatccgccccatcggcgcggcgatcaaggag
ttcttcggcacctcgcagctgtcgcagttcatggaccagaacaacccgctgtcgggcctg
acccacaagcgccgcctctcggcgctgggccccggtggtctgtcccgtgagcgcgccggc
atggaggtccgcgacgtccacccgtcgcactacggccgcatgtgcccgatcgagacgccg
gaaggcccgaacatcggcctgatcggttcgctctgctcctacgcgcgggtcaacccgttc
ggtttcatcgagacgccgtaccgcaaggtcgtcgagggccaggtcaccgaccaggtcgac
tacctcacggccgacgaggaagaccgcttcgtcaaggcgcaggccaacgcgccgatcacc
gacgacggccacttcgtcgagaacaaggtcctgggtcgccgcaagggcggcgaggtcgag
ctgatcgacccgctcgagatcgactacatggacgtgtcgccgcggcagatggtctccgtc
gcgacggcgatgatcccgttcctggagcacgacgacgcgaaccgcgcgctgatgggcgcg
aacatgcagcgccaggccgtgccgctgctgcgcaaccaggccccgtacgtgggcacgggt
gtggagctgcgcgccgcggtcgacgccggtgacgtcctcgtggccgagcaggccggcgtg
gtcgaggagctgtccgcggacatcatcacgatcatgcacgacgacggcacgcggaagagc
tacggactgtacaagttccgccgctccaaccacggcacgtgcttcaaccaccgcccgatc
gtcgacgagggtgaccgcgtcgagaagggccaggtcatcgccgacggcccgtccaccgag
aacggtgagatggcgctgggcaagaacctgctcgtggcggtcatgccgtgggagggccac
aactacgaggacgcgatcatcctctccgagcgcctggtgcaggacgacgtgctcacgtcg
atccacatcgaggagcacgagatcgacgcccgcgacaccaagctgggcgccgaggagatc
acccgggacatcccgaacgtctccgaggaggtgctcgccgacctcgacgagcgcggcatc
atccgcatcggcgccgaggtccgcgacggcgacatcctggtcggcaaggtcacgccgaag
ggcgagaccgagctgacgccggaagagcgcctgctccgcgcgatcttcggtgagaaggcc
cgcgaagtccgcgacacctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggc
atccgcgtgttctctcgcgaggacgacgacgagctgcccccgggcgtcaacgagctggtc
cgcgtctacgtggcccagaagcgcaagatccagccgggcgacaagctcgccggccgccac
ggcaacaagggcgtcatcggcaagatcctgcccgccgaggacatgcccttcatggaggac
ggcacgccggtcgacatcatcctgaacacccacggtgttccgcgacggatgaacatcggc
cagatcctcgagctccacctgggctggctggcctcgcagggctggacgatcgagggcaac
ccggattgggcgaagaacctgtccgaggagctctacgacgtcgcgccgaacacgaacacc
gccactccggtgttcgacggcgcgaaggaagaggagctcaccgggctgctcggggcgacc
aagccgaaccgcgacggcgagcgcatggtcaaggagaacggcaaggcgaccctgctggac
ggccgctccggcgagccgtacccgtacccggtcgcggtcggctacatgtacatcctgaag
ctgcaccacctggtcgacgacaagatccacgcccgctccaccggcccgtactcgatgatc
acgcagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggtgagatggag
tgctgggcgatgcaggcgtacggcgctgcctacacgctgcaggagctgctcacgatcaag
tcggacgacgtggtcggccgcgtgaaggtgtacgaggccatcgtcaagggggagaacatc
cccgagccgggtatcccggagtcgttcaaggtgctcctgaaggagctccagtcgctgtgc
ctgaacgtcgaggtgctctccagcgacggtgcggccatcgagatgcgcgactccgacgac
gaggacctcgagcgcgccgcggccaacctcggcatcaacctgtcccgcaacgagtcgccc
agcgtggacgacgtcgtgcactga
DBGET
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