Aristolochia californica: 137944714
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Entry
137944714 CDS
T10486
Name
(GenBank) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
acak Aristolochia californica
Pathway
acak03440
Homologous recombination
acak03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137944714
03460 Fanconi anemia pathway
137944714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acak03032
]
137944714
03400 DNA repair and recombination proteins [BR:
acak03400
]
137944714
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
137944714
DNA replication proteins [BR:
acak03032
]
Eukaryotic type
DNA Topoisomerases
137944714
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
137944714
FA (Fanconi anemia) pathway
137944714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
137944714
NCBI-ProteinID:
XP_068646576
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MSGGRRRMVLNVAEKPSVAKSVSAILSRNRGLRVRDGRSRYNKIFEFECSIGVPVPDPGN
PRRPRYEYYSSHMLFTSVIGHLMELEFEDRYRKWHSCDPADLYHAPVRKYVPQDKLDIKR
TLEEEARKCECLVLWLDCDREGENIAFEVIEVCISANPHLEIYRAHFSALTDRDILGSAQ
KLVKPNQLDADAVDARQEIDLRIGASFTRFQTMLLRDAFILDNAQDDRNVVLSYGPCQFP
TLGFIVERFWEIQAHEPEEFWTINCSHTSEDGTSTFSWARGHLFDYPCAVILYDMCVEEP
TATVIKVSNQERKKYPPFPLSTVELQKRASRYFRMSSEHTMKVAEDLYQTGFISYPRTET
DSFSLNMDLQAIVQEQQDHSSWGSYAQRLLDPAEELWSSPGNGGHDDKAHPPIHPTKFSA
GESRWSQDHNRLYELVVRHFLACVSKPAIGAETTVEIDIAGESFTATGRVIIAKNYLEVY
RFESWGGSTIPNYALGQKFIPTSLTLDSSITRPPPLLSESDLLSCMDKAGIGTDATMHDH
IKKLLDRFYASKDNNTRFSPTNLGQALVMGYDTMGYELWKPNLRANMERDMKAISAGTKR
KSDFLQTCLEQTKSCFLDARLNKVKLLEAMEIFFERSNRFTESTTSGGEIVRTCNLCLES
NMMLKRRPDGHFMVGCSHFPLCRNVVWLPAPIISASVTSQVCTTCIPGPVYKIQFNFRRT
EIPPNYDVNHLGCIGGCDDALKELTEICGTGPRIPSSTTARGLQSTDFSASAHRGGATRQ
TGHSSSDWPSQTRRSQNDRNQTSGSGRAPVVCNSCGTPCILRTSNTTANRGRKFYSCQSQ
ECNFFVWEDNVENNGTGRGASTNRGTATRRGGRGRARREGMSSTSTAGTFVTATGEPVSG
GRCYSCGDPSHFANVCPNRGTR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggtcggcggagaatggtgctaaacgtggcggagaagccttccgtcgccaaa
tccgtgtccgcgattctttcaagaaaccgaggcctccgcgttcgcgacggcaggtcgcgc
tataacaagatcttcgagttcgaatgctccatcggcgtgccggtgcctgatcccggcaat
ccccgccggcctcggtatgagtactattcctctcatatgctttttacttccgtcataggc
catctcatggaactggaattcgaggaccgctaccgcaaatggcactcctgcgatcccgct
gatctctaccatgcgcccgtgaggaagtatgtccctcaggacaaattggatatcaagaga
actttggaggaggaagcaaggaaatgtgagtgtcttgtgttgtggctcgactgtgatagg
gaaggtgaaaacattgcatttgaagtgattgaggtctgtatcagtgcaaatcctcattta
gaaatataccgagcccacttctctgcattaacagacagggacatcctcgggtctgcacaa
aaacttgtgaagccaaatcaactagatgctgatgcagtggatgcaagacaagaaattgat
ctccgtattggtgcctctttcactagattccagacgatgcttttgagagatgcctttatt
cttgataatgctcaggatgataggaatgttgttctgagttatggtccttgtcagtttcca
acacttggttttattgtggagagattttgggagatacaagcacatgaacctgaggaattc
tggacaattaactgctctcacacatctgaagatggcacatctactttcagttgggcacgt
ggacatttgtttgattacccctgtgcagttatactttatgatatgtgtgttgaagaacct
actgcaactgtcattaaagtcagtaaccaggagaggaaaaagtatcctccatttccgttg
agtacagttgagctccaaaagcgtgcttcccggtacttccgcatgagttctgaacatacc
atgaaggtagcggaggatctttatcagactggattcatcagttatcctcgcacagagact
gacagcttctcactcaacatggatctgcaagcaattgtgcaagaacaacaagatcattct
tcatggggctcatatgcacaacggctcttggaccctgcagaagaactctggagtagccct
ggtaatggtggccatgacgacaaagcacaccctcctattcatccgacaaagttttcagct
ggagagtctcggtggagtcaagaccataataggttgtatgagcttgtggttcgccacttc
cttgcatgtgtgtcaaaaccggccattggggctgaaaccacagttgaaattgatatagct
ggtgaatcatttactgcaacaggacgagtgataatagctaaaaattacttggaggtatat
cgttttgaatcttggggtggttcaacaattccaaattatgcacttggtcaaaagtttatt
ccaacatctttgactcttgattcaagtattacaagaccacctcctcttttgagtgaatca
gatttactaagttgtatggataaggcaggcattggtactgatgcaaccatgcatgatcat
ataaaaaagttgcttgatcggttctatgcaagtaaagataacaatactcgtttctctcca
actaacctggggcaggcactagtaatgggatatgataccatggggtatgagctttggaaa
ccaaatcttcgtgctaatatggaaagggacatgaaagctataagtgctgggacaaagaga
aaatctgattttctgcagacttgcttggagcaaacgaaatcttgctttttagatgcaagg
ttaaataaagtcaaactcctggaagcaatggagatcttctttgagaggtcaaacagattt
actgaatctactacatctgggggagagattgttcggacctgtaacctgtgcctggagtca
aacatgatgctgaagcggagaccagatggtcactttatggttggctgttcgcattttccc
ctttgtagaaatgtcgtttggctccctgctccaattatatcggcttcagtaaccagtcaa
gtttgcaccacatgcattccaggtcctgtttataagattcaatttaatttccgccgtaca
gagataccaccaaactatgatgtgaatcacttgggttgtattggtggttgtgatgatgca
ctgaaggaactgactgaaatttgtggaactggtcctcggattccttcaagcactacagca
agaggacttcaatccacagacttctctgctagtgctcaccgagggggtgctacaaggcaa
acggggcattcttctagtgattggccttcgcagactcggcgcagtcaaaatgatagaaac
caaacatctggaagcggtagagctccagttgtgtgtaactcatgtgggaccccttgcatt
ttgcgcacttctaatacaaccgctaaccgaggaaggaagttttacagttgccagtcacag
gagtgcaatttctttgtgtgggaggataacgttgaaaacaatggcacaggcagaggcgcg
tcaaccaatcgaggcactgccactaggagaggggggcgtggcagagcacgaagggaaggg
atgtcttccaccagcactgctggaacttttgtaacagcaacaggggagcctgtatctgga
gggaggtgttacagttgtggtgatccctcccactttgcaaatgtttgtccaaaccggggc
acaagataa
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