Acinetobacter calcoaceticus: BUM88_01345
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Entry
BUM88_01345 CDS
T05452
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acal
Acinetobacter calcoaceticus
Pathway
acal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BUM88_01345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acal03021
]
BUM88_01345
03400 DNA repair and recombination proteins [BR:
acal03400
]
BUM88_01345
Enzymes [BR:
acal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BUM88_01345
Transcription machinery [BR:
acal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BUM88_01345
DNA repair and recombination proteins [BR:
acal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BUM88_01345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RelB
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AQZ80373
LinkDB
All DBs
Position
273105..277193
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMEAPYLLSIQVDSYRTFLQGGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ
IDLVPDRLRGEMAQFDIADNDGKIIVEQGKRINARHVRQMEASGLAKLSVPDEYLYERIT
AEDITLRNGDVIPANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADSLRADTTSGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDAVEYLSAIEEVGTVIAQADSAIDKDGNLTEDFVSVRHQGDFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGAIEYVDASRIVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQNIIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRAMAIEKA
QLDAYRKDLKEEYKIFEEAARERVIRLLNGQESNGGGSTKRGDKLVEDMLSGLELVDLLE
IQPTDEAIAERLSQIQVFLKEKSAEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDAEVLALSGNLRAGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggaagcaccgtacttactttcgatccaggtcgattcgtatagaacgttcttgcaa
ggtggcaaatctccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
ttccctatagaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aagcctgagtttgatgtgcgtgaatgtattttacgtggttcgacttatgcggcaccaatg
cgcgtaaaaattcgtttgattattaaagatcgcgaaactaaatctattaaagacgtacgt
gaacaagaagtctacatgggtgaaatgccactcatgacagacaatggtacctttgtgatc
aatggtactgagcgtgtaatcgtatctcaattacaccgttcacctggtgtgttctttgat
cacgataaaggcaaaacacattcaagtggtaaagtactttattctgcacgtattattcct
taccgtggttcatggttagatttcgaatttgatgcaaaagatttagtttatgtacgtatt
gaccgtcgtcgtaaattattagcaactgttgtgttgcgtgcattgggttataacaatgaa
caaattttgaatttgttctatgaaaaagtgcctgtatatcttgatatgggtagctatcaa
attgacctcgttccagatcgtctgcgtggcgaaatggcgcaatttgatattgcagacaat
gatggcaaaatcattgttgagcaaggtaaacgtattaatgcacgtcacgtacgtcaaatg
gaagcttctggtttagctaagctatcagttcctgatgagtacttgtatgagcgtatcact
gccgaagatattactttacgtaatggtgatgtgattcctgcaaacacattgttaagccat
gaagttatggtgaaactggcagaaggcggtgttaaacagttcaatatcttgtttacgaac
gatattgaccgtggttcatttgttgctgactcattacgtgctgacacaacttctggtcgt
gaagaagcattagttgaaatctataaagtaatgcgtccaggcgagccaccaacaaaagaa
gctgctgaaaacttatttaataacttattcttctcttctgaacgttatgacttatctcca
gtaggtcgtatgaaattcaaccgtcgtttgggtcgcccatacgaagttggtactgaccag
aagtcacgtgaagtagaaggtattttatcgcacgaagatatcatcgatgtattacgtaca
ttagttgaaatccgtaacggtaaaggtgaagtcgatgatatcgatcacttaggtaaccgt
cgtgtacgttctgttggtgaaatgactgaaaaccaattccgtgttggtttggttcgtgtt
gaacgtgctgttaaagagcgtttaagccaagcagaaacagataatttatctccgcaagat
ctcattaacgcaaaaccagttgcagctgcaatcaaagaattctttggttcaagccaattg
tctcagtttatggatcaaaacaacccattatctgagattacacataaacgtcgtgtttca
gcgcttggacctggtggtttaacacgtgaacgtgcgggctttgaagtacgtgacgtacat
caaactcactatggtcgtgtatgtccaattgaaacgccggaaggtccaaacattggtttg
atcaactcgctttctgtttatgcaaaagcaaatgattttggtttcttggaaacaccttac
cgtaaagtggtagatggccgagtaactgatgctgttgaatacctttctgctattgaagaa
gtaggtactgttattgcacaggccgattctgcgatagataaagatggtaacttaacagaa
gattttgtttctgttcgtcaccaaggtgactttgtacgtatgccacctgaaaaagtgacg
catatggatgtatctgcacagcaggttgtatctgtagctgcatcacttattccattcctt
gaacacgatgacgcgaaccgtgcattgatgggttcaaacatgcaacgtcaggcggttcct
actctacgtgcggataaaccgcttgtaggtacaggtatggaagcgaacgttgcacgtgac
tcaggcgtatgtgtgatcgcaaaccgtggtggtgcgattgaatatgtagatgcttctcgt
atcgttattcgtgtaaacgaagatgaaatgattgcaggtgaggctggtgtagatatttac
aacctcattaaatatacacgttctaaccaaaacacttgtatcaaccaaaatattatcgtg
aatttgggcgacaaagttgctcgcggtgacattctggcagacggtccgtcaacagatatg
ggtgagcttgcgcttggtcaaaacatgcgtgtagcgttcatgacgtggaatggttacaac
tacgaagactcgatcttattatctgagcgtgtacttcaagaagaccgtttaacttctatt
catattcaagaattatcatgtgtagcgcgtgataccaagttaggtgcagaagaaattact
gccgatattcctaacgtaggtgaagctgcactttctaaacttgatgagtcaggtatcgtt
tatatcggtgcggaagttactgctggtgacatccttgttggtaaagtaacgcctaaaggt
gaaactcagttaactcctgaagaaaaattgcttcgtgctatctttggtgagaaagcagct
gacgttaaagactcatctttacgtgttccatctggtactaaaggtacagttatcgatgtt
caagtcttcacgcgtgatggcttagagaaagatgaccgtgcgatggcaattgaaaaagca
cagcttgacgcttaccgtaaagacttgaaagaagaatacaagatctttgaagaagcagct
cgtgagcgtgtaattcgtttgcttaacggccaagagtctaacggtggtggttcgactaaa
cgtggcgacaaactcgttgaagatatgttgtctggtttagagcttgttgacttacttgaa
atccaacctacagacgaagcaattgctgaacgtttatctcaaattcaagtgttcttgaaa
gagaagagcgcagaaattgatgagaagtttgcagagaagaaacgtaagctttcgactggt
gatgagttaacaactggtgttctgaaagttgttaaagtttacctagcagttaaacgtcgt
attcagcctggtgataaaatggctggtcgtcacggtaacaaaggtgttgtatctaacatt
ttacctgttgaagacatgccacacgatgctaacggtgtaccggtagatatcgtattgaac
ccattgggtgtaccatctcgtatgaacgtgggtcagattctcgagactcacttgggtatg
gcggctaaagggcttggtgataaaatcgaaaaaatgttgaaagaacagcgcacagtttta
gaacttcgcgaattcttagacaagatttataacaaagttggcggcgagcaagaagatctt
gatagcttaactgatgctgaagtcttagcactttcaggcaacttacgtgctggtgtgcct
ttagctactcctgtatttgatggtgctgaagaaagccaaattaaagacttacttgaatta
gctgatatttcgcgtacaggtcaaacagtattgtttgatggtcgtacgggtgaacaattt
gatcgtcctgtaactgtaggttacatgtacatgctcaaattgaaccacttggttgatgac
aaaatgcatgcgcgttcaactggttcttactcacttgttacacagcaaccgcttggtggt
aaagcacagttcggtggtcagcgtttcggtgagatggaggtctgggcactcgaagcttac
ggcgcagcatatacacttcaagagatgttaactgttaagtcggatgacgttgaaggtcgt
acacgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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