KEGG   Acanthamoeba castellanii: ACA1_073270
Entry
ACA1_073270       CDS       T02667                                 
Name
(RefSeq) THO complex 3 family protein
  KO
K12880  THO complex subunit 3
Organism
acan  Acanthamoeba castellanii
Pathway
acan03013  Nucleocytoplasmic transport
acan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACA1_073270
  09122 Translation
   03013 Nucleocytoplasmic transport
    ACA1_073270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acan03019]
    ACA1_073270
   03041 Spliceosome [BR:acan03041]
    ACA1_073270
Messenger RNA biogenesis [BR:acan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     ACA1_073270
Spliceosome [BR:acan03041]
 Complex C
  Other components
   EJC/TREX
    ACA1_073270
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    ACA1_073270
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Tricorn_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C eIF2A Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD_LRWD1 KNTC1_N B-prop_COPA_B_2nd Beta-prop_ELP1_1st Cytochrom_D1 Beta-prop_ACSF4 YNCE Beta-prop_VPS8 PD40 PROPPIN
Other DBs
NCBI-GeneID: 14924666
NCBI-ProteinID: XP_004353211
UniProt: L8HG33
LinkDB
Position
Unknown
AA seq 255 aa
MVLKGHTNSVHQLCWDPTHPEYLATASADKTVRIWDTRSAKSTHTLKTSGANLNIAWSPD
GGHIAVGNKLDHLTIIDTRKFETMKTIKFAFEVNEIAWSKDLTFLFLTTGRGGVEVMSWP
SLERTCTLHAHTANCYCVKFSPSGEYFAVGSADALVSLWDVEDLACLRTFSRLQFPIRTV
SFTHDSKMIASASEDLSIDVALVETGELVSQIKCNAAINTMAWHPQNHWLAFAEAEKDKY
AKDAGNITLYQLPSQ
NT seq 768 nt   +upstreamnt  +downstreamnt
atggtgctgaaggggcacaccaacagcgtgcaccagctgtgctgggaccctacgcacccc
gagtatctggctacagcgtcggccgacaagaccgtccgcatctgggacacgcgaagcgcc
aagtcgacacacaccctcaaaaccagcggtgcaaacctcaacattgcgtggagcccggac
ggcggacacattgccgtgggcaacaagctcgatcacctgacgatcatcgatacccgcaag
ttcgagaccatgaagaccatcaagtttgcctttgaggtgaacgagatagcatggagcaag
gaccttaccttcctgttcctgaccacgggacgcggaggagtggaggtcatgagctggccc
tcgctggagcgaacctgcaccctccacgcccacacagccaactgctactgcgtcaaattt
tcaccatcgggagagtactttgcagtgggcagtgccgatgcgctggtgagtctgtgggac
gtcgaggacctcgcctgcttgcgaacctttagccgcttgcagttccccattcgcaccgtc
agcttcacgcacgacagcaagatgatcgcctccgcctccgaggacctgagcatcgacgtg
gcgttggtggagacgggcgagctggtgtcgcagatcaagtgcaacgcggccatcaacacg
atggcctggcacccacagaaccactggctggcctttgccgaagccgagaaggacaagtat
gccaaggacgcgggcaacatcaccctctaccagctcccgtcccagtag

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