Acanthamoeba castellanii: ACA1_189590
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Entry
ACA1_189590 CDS
T02667
Name
(RefSeq) transcriptional regulatorrelated, putative
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
acan
Acanthamoeba castellanii
Pathway
acan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACA1_189590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_189590
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACA1_189590
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
ACA1_189590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
14911721
NCBI-ProteinID:
XP_004333306
UniProt:
L8GEX7
LinkDB
All DBs
Position
Unknown
AA seq
2391 aa
AA seq
DB search
MSQSGRRRRSKSSSSPGPAWNTPVAPTMDNFSFILGSQIRYLVSSLSKKNYRTSVAELEH
LITLYGHDAYLYLLRCLMEQIDLKDSAKSQQRFQLLQQQLLQLIDKPNFPSVLFQALSGL
ELKEDFLNQLSKALKLNLAQDIVLALGLAQAPEKSIRHEGRSFLRIKLPEVENNVSLLPE
SLLHSLLYYLGSKDGFAKQRATLAKALQASGKPLSLSLLVLASDDKIDLDSRRGLEERTD
EDADSEEALIAEISAAVHPSELMQDIGYQCCQTAANLKELLKKFPDANEADVAAILAMML
RTSAEGEEGSSEPSSWNLGVFVDTIKELHPKLNWALVIKSLDRPDFYIADAKAMHFILNV
YKRATKESFPVDAVTGKWLNTRGQLSFLQQALALGAEAVNFASTTPQPTTFTLDLPHPNK
SSATLVQNWHNLALIERLLNLAESEGFDAVKEIFKGPLENCPELLLLKLAQLQSPWGILY
WELCSELLALFLGNHPNSSYVLQKLWGVNRSLVMRGMVESYNKDAYCLSRLLDVAHDIKA
LSPILEIRPFAFAIDLAALASRREYLNLEKWLQDRINEHQLEFVVACLSYLKEKKKAYAK
NSSSTKGSNANSAVAALSADTLGVFFTVMQANINMMPADMVEEFDQLQSAHAIQLSKVTA
TQGMNTPSGGASADPPAPEKEGFPKEIEKTANAYFQSVYTGQVSIDEIVTLLKNFKASKN
KREQKIFSCMVHNLFDEYRFFPKYPDKELRITGILFGQLIQNQLVSYISLGIALRYVLEA
LKKAPNTKMFKFGLFALQQFKSRLGEWPQYCSHILQIPHIRQYHPDIVEFIEDSLKNASG
VAAPEPTVPAMPKQKTGDAAGTSTFLPGFAQAEAAQAGQPAALTGKAPVAKQSPATTAPA
ARPTTPPQAAPPASNVQPQSSAKATGSASAAPAMKGNAPSFHMGNQLPLEAILQSITPAS
APDETIKDKIFFVFNNVSKQNMDIKANELRSILHSEDWPYLAQHLVINRASIEPNFHTLY
LEFLDYLKIPGLLELVLNSTYAAIQALLRSQRITVNPAERTLLKNLGSWLGNLTLARNKP
LIHKRLALKELVLEAYETGKLIALIPFAAKVLEACTKSKIFAPPNVWVMAIMRLFAEIYQ
IPELKLNLKFEIELLCNHMGLDLNEIKPTEALKDKLRPDSQDFTAPPPAAALAPAPTPAA
VTEVQAPHVPVVARQPPISPPSEPTPVAQQAQQPPLGTPLQFPTAAPALPAGAAGLWKIN
PHIPLFSQQPHLKRCVTMAIDKAIKEILTPVMERSATIASITTRELVLKDFALEPDEQIM
RTAAHYTVQSLASSLAMVACKEPLRVSIASHLRSLLQANVSDQAQRALIEHAVQTVCTDN
LDTACALIEKTTAEKALRETDDALAPALEARRKHRERAHSQPYIEPNFFSGRYPSSLPEP
LRPKPGGLLPHQKRVYDEFSNVLSRTPRVQPAPPQVVERVPTPGAPTVAPTPVQPFRPYP
TPIMAPNMPEGGDVSQISSSGLTYVVNQGTVNLSQQDARRSIHTREVASPVKAVKKEKLT
TGQALQKFKSILHDLEASIAGAVTTLSSLEQLPEDHPVLHFLDKIPTLITNSINPNEVAL
AIAQKIFKRMYEKIEYDLQIDTHIAILEHIRDVCKKVVKELTNWIIYSDADRKFHRIITI
GLINSRLLKATDFDVHLSKKMDSGRSKQAVDFAILVLQKCMVEPKEPTVTASEFFNTLEV
LTKIAQRGAGPEGLMELITQAKSVTKASAEKLRSPRKLARSRDASEAALSASSQQAAMLP
GMQAPEIRDPMYEQVRQLWEEWKHIYYQPNQSDKVFSTYLTQLQHKYVLHLRLRPLINFH
FNERTRTYSPVLLPSVLQSEDQGVVKSFFRVCTILAIEQSFNPTIGTTPQSQPVNTSVLP
GQLSYRSVDAFSKLVVFLYKFSPEGLANANGTKLNLLNKVLDTVVRVLVKNYDTKRTKFN
QRPFYRLFASLLIDLNSLTAETDPAHLQVLMAFSNCFMILSPIRVPGFCFAWLELVSHSQ
FMPKLLLFKSQSGWPVFQQLLVELFKFLEPYLVNVELNEPIRLLYKGTLRVLLVLLHDFP
EFLCDYHFSFCDVIPPTCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEISQPPRILSK
YTAALTANKTFKQEVDNYLKTGQPYTFLLELRSKLFLPQGQALVGGTRYNVPLINALVLY
VGAQAVAQLHPTTSQPPAPINQSAPMNIFQHLALDLDTEGRYLFLNAIANQLRYPNNHTH
YFTSVLLYLFAEANQGQGQGQGQGEQSSQEIIQEQITRVLLERLIVNRPHPWGLLITFIE
LIKNPRYNFWSHSFTRCAPEIERLFESVARSCMGPGPGGAPKSDRPGLVDK
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatctggaaggcgaagacgcagcaagtcttcctcgtccccaggtcccgcttgg
aacacgcctgtcgcacccacgatggataatttcagcttcattttgggctcccagatccgc
tacctggtgtcttcgctctcgaagaagaactaccgcacgagcgtcgctgaactggagcac
ctcatcacgctctacgggcacgatgcgtatctctacctgcttcgctgcttgatggagcaa
attgacctcaaggacagcgccaaaagccagcagcgcttccagcttcttcagcagcagcta
ctccagctcatcgacaagcccaacttcccgtccgtcctcttccaagccctgtcagggctc
gagctgaaggaagattttctcaaccagctctcgaaggcgttgaagctcaatctggcccag
gatatagtcctggcgctgggcctcgcacaggctcctgagaagagcattcgccacgaaggg
cgctctttcctccgcattaagctgcccgaggtggaaaacaacgtgtctcttctgcctgaa
tcgcttctgcatagcctgctctactacttgggcagcaaggacggctttgcaaagcagaga
gcgactctggccaaggctcttcaggcctcgggcaagcctctttcgctctcgctgctcgtt
ctcgcgagtgacgacaaaatcgacttggattcgcgaagagggctcgaggagcgcaccgat
gaggatgcggacagtgaagaggcgctgattgcagagatctcagctgccgttcaccccagc
gaattgatgcaagacattggctaccagtgctgccagactgcggccaatctcaaggagctt
ctcaagaagttccctgatgccaacgaagccgacgttgccgcgatcctcgccatgatgctg
cggacgagcgcggaaggcgaagaaggctcaagcgagcctagcagttggaatcttggagtg
tttgtagataccatcaaggagttgcaccccaagttgaactgggctttggtcatcaagagc
ctcgaccgaccggacttctacatcgccgacgccaaggcgatgcacttcatcctcaacgtg
tacaaaagggcgacaaaagaatcgtttccagtcgatgcggtgacgggcaagtggttgaac
acccgaggccagctgtcgttcttgcagcaggctcttgctctgggagcggaggcggtcaat
ttcgcctccacgaccccgcagccgacaacattcacgctcgatcttccccaccccaacaaa
tcgtcggccacgctggtgcagaactggcacaatctggcgctgatcgagcgcctgctcaac
ctggccgaatcagagggcttcgatgcggtgaaggagatcttcaagggtcctctcgagaac
tgcccagagttgcttctcctcaagctcgcgcagctacagtcgccgtggggcatcctgtac
tgggagctgtgctccgaactgctggcgttgttcctgggaaaccaccccaactccagctat
gttctgcaaaagctgtggggcgtcaatcgatctctggtgatgcgcggcatggtagagagc
tacaacaaggatgcttactgcctctcccggctcttggacgtggcgcacgatatcaaggca
ctctcgcccatcctggagattcgtccgtttgcctttgccatcgaccttgccgcactggcc
tcacgccgagagtatctcaacctggagaagtggctccaggacagaatcaacgagcatcag
ctcgagtttgttgtggcgtgcctgagctacctcaaggagaagaagaaagcgtatgcgaag
aactcgtcatctaccaagggaagcaacgccaacagtgctgtcgccgctctttcggcggac
acgttgggcgtgttcttcaccgtgatgcaggccaacatcaacatgatgccggccgacatg
gtcgaggagttcgatcagctgcagagtgcgcacgcgatccagctcagcaaggtcacggcc
actcagggaatgaacaccccgagcggcggagcgtcagccgacccacccgcacccgagaag
gagggcttcccgaaggaaatcgagaagacggccaatgcctacttccagagcgtctacacg
ggccaggtttcaatcgacgagatagtcacgctcttgaagaatttcaaggcgtcgaagaac
aagagggagcaaaagatattctcgtgcatggttcacaacctcttcgacgagtatcgattc
ttccccaagtaccccgacaaagagctgcggatcaccggcatcctcttcggccagctgatc
caaaaccagctggtgtcgtacatctcgctcggaattgccctgcgatacgtgctggaagcg
ctcaagaaagcacccaacacgaagatgtttaagttcgggctgttcgcgctccagcagttc
aagtcgcgccttggcgagtggcctcagtactgctcgcacatcctgcaaatcccccacatt
cggcaataccatcccgacattgtggagttcatcgaggattcgctcaagaacgcgtccggc
gttgccgctcccgaacccaccgtgcccgccatgcccaagcaaaagacaggagacgccgct
ggaacgtccacgttcttgcccggattcgcacaggccgaggcagcacaagctgggcaaccc
gctgctctcaccggcaaagccccggtggccaagcagtcgcctgccacgaccgcccccgcc
gcgcgcccgaccacgcctcctcaggccgcgcctcctgcgagcaacgtccagccacagagt
tcggcaaaggcgaccgggtctgcgtctgctgctcccgccatgaagggcaacgctccctcg
ttccacatgggcaaccagctgcctttggaggccattctccaatcgatcaccccagcttct
gcgccggatgagacgatcaaggacaagatcttcttcgtgttcaacaacgtgtctaagcag
aacatggacatcaaggccaacgagctccgaagcatcctgcactcagaggactggccgtac
ttggcccagcacttggtcatcaaccgcgccagtatcgagccgaacttccacacgctgtat
ctcgagttcctcgactacctcaagatccccgggctcttggagctggtgctcaattccact
tacgctgcgatccaagcgctgttgcggtcccaacgcatcacagtgaacccagcggagagg
accttgctcaagaacttgggctcttggctgggtaacctcacactggcgcgcaacaagcct
ctgatccacaagcggcttgcccttaaggaattggttctggaggcctatgagacgggcaag
ctgatcgcgctgatcccgttcgcggccaaggtgctcgaggcttgcactaagtccaagatc
ttcgctcctcccaacgtctgggtgatggcgattatgcggctgttcgcggagatctatcag
atccccgagctcaagctcaaccttaagttcgagatcgaactgctgtgcaatcacatgggg
ctcgatctgaacgaaatcaagcccactgaagcgctgaaggacaaactcagaccagacagt
caggacttcaccgcgcctccaccagctgccgcgctggctccagcaccaacacctgcagcc
gttaccgaggtccaggctccgcatgtccctgtggtcgcgcgccagccgcccatctcgcct
cccagcgagccgactcctgtggcccagcaggctcagcagccgcctctcggaacgccgctt
cagttcccgaccgcggcgcccgcgctgccggccggggccgcgggcctgtggaagatcaac
ccgcacattccgctcttcagccagcagcctcacctcaagcgatgcgtcaccatggccatc
gacaaggccatcaaggagattttgacccccgtcatggaacgatcggccaccattgcctcc
atcacgacgagggagctcgtgctcaaggactttgctctggagcccgacgagcagatcatg
cgcaccgctgcgcactacaccgtgcagagcctggcgtcgagccttgcgatggtggcctgc
aaggagccccttcgcgtcagtatcgccagccacttgcgttcgctgcttcaggccaacgtg
agcgaccaggcccagcgcgcgttgatcgagcacgccgtccagaccgtttgcaccgacaac
ctggacaccgcgtgtgccctcatcgaaaagaccacggccgagaaggcgcttcgagaaacc
gacgacgccctcgctcccgcccttgaagcgaggcgtaagcaccgagaaagagcgcacagt
cagccctacatcgagcccaacttcttctctggccgctatccgtcgtcgctccccgaaccg
ttgcgccccaagcccggcggtctgcttccccaccagaagcgggtctacgatgagttcagc
aacgtcctctcccgcacgccccgcgtccagcccgcacctccgcaggtcgttgagcgcgtc
ccgacccccggcgcccccaccgtggcgcccacccctgtgcagcccttccggccctacccc
acgccgatcatggcgccgaatatgcccgagggaggcgacgtgtcgcagatctcgtcttcc
ggactcacctacgtcgtcaaccaggggacggtgaacctgtcgcagcaggacgcccgccgc
tccattcacaccagggaggtcgcatcccccgtcaaggccgtgaagaaggagaagctgacg
accggtcaggctctgcaaaagttcaagagcatcctgcacgacctcgaggcctctattgct
ggcgccgtcacgaccctctcgtctctggagcagcttcccgaggaccacccggtgcttcac
ttcctggacaagatcccaacgctcatcaccaattccatcaacccgaacgaggtcgcgctg
gccattgcgcagaagatcttcaagcgcatgtacgagaagatcgaatacgacctgcagatc
gatacgcacatcgccatcctggagcacatccgcgatgtgtgcaagaaggtcgtcaaggag
ctgaccaactggatcatctactccgatgccgacaggaagttccaccgcatcatcaccatc
gggcttatcaactcgcggctgctcaaggcgaccgactttgacgtccacctctcgaagaag
atggacagcgggcgcagcaagcaggctgtggactttgccatcctggtgctgcagaagtgc
atggtggagcccaaggagcccaccgttaccgcctccgagttcttcaacaccctcgaagtg
ctcaccaagatcgcccagcgtggcgccggacctgaagggcttatggagctcatcactcaa
gccaagagtgtgaccaaggcctcggccgagaagctccgttcgccgcgcaagctggctcgc
tccagggacgcgtcggaggccgccctctcggcttcctcccagcaggccgccatgctgccc
ggcatgcaggcgcctgagattcgcgaccccatgtacgagcaggtcagacagctgtgggag
gagtggaagcacatctactaccagcccaaccagagcgacaaggtcttctccacctacctc
acccagcttcagcacaagtacgttctccacctccgcctccgccccctcattaacttccac
ttcaacgaacgaacgcggacatactcaccggtgttgcttcccagcgtgctgcaaagcgag
gaccagggcgtggtcaagagcttcttccgggtgtgcaccattctggcgatcgagcagagc
ttcaaccccaccatcggcaccacgcctcagtcgcaacccgtcaacacatcggtcctcccc
ggtcagctcagctacaggtcggtcgacgcgttcagcaagctggtagtcttcctgtacaag
ttctcgcccgagggcctggccaacgcgaacggtaccaagctgaacctcctgaacaaggtc
ctcgacaccgtggtacgcgtgctcgtcaagaactacgacaccaagcgcaccaagttcaac
cagaggcccttctaccggctcttcgcctcgctcctgatcgacctcaactcgttgaccgct
gagacggaccccgcccacctccaggtgttgatggcctttagcaactgcttcatgatcctg
tcgcccattcgagtgcccggcttctgcttcgcctggctcgagctcgtgtcccacagccag
ttcatgcccaagctgctcctgttcaagtcgcaaagcggctggccggtgttccagcagctg
ctggtggagctgttcaagttcttggagccctatctggtgaatgtggagctgaacgagccc
atccgtctgctctacaagggcaccctccgagtgctcctggtgctgcttcacgacttcccc
gagttcctgtgcgactaccacttcagcttctgcgacgtcatcccgcccacctgcatccag
atgaggaacctcattctctccgccttcccgcgtaacatgcgtctgcccgacccgttcacg
cccaacctgaaggtggacctgctgccggagatcagccagccgccgaggatcctgtccaag
tacacggccgccctcacggccaacaagaccttcaagcaggaggtggacaactacctgaag
accggccagccctacacgttcctcctcgagctgcgttccaagctcttccttccgcagggc
caggcgctcgtgggcggcactcgctacaacgtgcccctgatcaacgcgctcgtactctac
gtcggcgcccaggccgtggcccagctccacccaaccacttcgcagccgcccgcgcccatc
aaccagtcggccccgatgaacatcttccagcacctggcgctcgacctcgacaccgagggc
cgctacctgttcctcaacgccatcgccaaccagctgcgctacccgaacaaccacacccac
tacttcacgtcggtgctgctctacctgttcgccgaggccaaccagggacagggtcaaggc
cagggccagggcgagcagtcgagccaggagatcatccaggagcagatcacccgcgtgctc
ctcgagcggctcatcgtcaaccggccgcacccgtggggcctgctcatcaccttcatcgag
ctcatcaagaacccgcgctacaacttctggagccactccttcacccgctgcgcccccgag
atcgagcgcctcttcgagtccgtcgcccgctcgtgcatgggtcccggccccggtggcgcc
cccaagagcgaccgtcccggccttgtagataagtaa
DBGET
integrated database retrieval system
