Acanthamoeba castellanii: ACA1_277460
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Entry
ACA1_277460 CDS
T02667
Name
(RefSeq) CrcB family protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
acan
Acanthamoeba castellanii
Pathway
acan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
ACA1_277460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_277460
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
ACA1_277460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRCB
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_EF3_N
HEAT_GCN1
DUF7811
Motif
Other DBs
NCBI-GeneID:
14921698
NCBI-ProteinID:
XP_004344570
UniProt:
L8H6F9
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MRIVPFVSLCAMVGVLTRIGLDELFGPNVLGVTSTESVTFPDWFPNAWGSFVMGFFVPMR
QSPFFARHANEFLMLVIAKAKTWTKRRRKEGTSRALEAGGGGGPSTVVAGEVEVHDVAEA
SGEESTKGKERMDDEEGTQPPENPPAGDEEHMRQQQEKRPAATHWKVTRADLLYCLLLSS
SVALLCLLWLLLEEYGGVTKRYIWIACLFAPCGAMLRYVLSRYNAWRRCVRFPFFTFLVN
IVGSIALALVVISVDLRGYDIDHELPGYTLHGFQVGFLGSLTTVSTFIGELYALPSVPYA
YIYAVASLGTAQAALTSSTAFTSGQHDRCAAPKDFTKKKAKLGKKAKPSGNQTVTDFRAR
SIVLPEQSLLQDKGTVVNKRNLSLQDLLSQCAHYNANVRKEAVLGMKDLFSLHPQSLGSS
LARLFDKVFDLISDEDLYVRQAIRTLFEFLLPLIPAPYMKLFVIYLTNGMTNINLDVRLS
ALELIKLVIVHLPEFLPTFYIELLPNFLDLLASVGFGTRSSTLPRDTSKKTGFQKHLPIL
KSLYHLLKSVHAYKTAQASEQQSSTSTSASSTSAFSWDWTEYKRRWPQAHARFFMTKGAT
GSNVESMIDQNSPVLISDFSKKIIPSLLKRWLECSPSDPFTSTANLECMALVLDIIHMLF
ILNDKANKRKEGEHAAASQTSVVFGSFLADFKKYLMPHFPISEPISKSVEDKKSKEGANM
RLTVSRLNCTLCAVMAHFVEPKAIEEIEMELEAEKSRPAPPTAAPLPAFLQKRDDKARDP
DDDVMKTLHESNRPDKWMTALYRHIVKKLKDKETAGNKGMVQEVSLLLPVVQKLLPALSP
PLQTQLMEAFHSFYLACHIMSQAKRKCIKWIVVLLTTPAHTRGGWSPDSTMTQQWILSFP
QILWKLQDKNTTTTQLILTTLVELINRKRHDSEALHTSLQSLKDHLVPFFFTQVPATKTR
KASNIYGPFVLLPEELQRLALQLVYYFDSLPAKLLKALTACSRNLNMSVLRYMTEILYHS
YVKGALSQFELASTVLSLLVANSANRKYQERADEDEDDDGEEVEELAPQVRKRTRTSSEA
TTSTSTSTSTQKQTRSRAVKDTQKGKEKENEMEVVVMDADDDEGEPVVEDRVAAAGGEKA
AAKAERARAERREVAEIIVANVRLWGVTEALESMQAMLTLLLTTEATDVETKEALLLFLC
LCARTRRASHDGGTEAAPTGLPQGLAAVMPQAIFASLTADWQQAEESLAAKRYESVLDIL
ASDSSILSAYLALLLDKLDGQRDQVLHLVLSLVLESRLQPMFAAADIRSRLQPLASALLQ
GTDTLTPAQHKLQVEMQLLYGSF
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgttccctttgtgagcctgtgcgcgatggttggggtgcttacgcgcatcggc
ctggacgagctgttcggacctaacgtgctgggcgtcacctcgaccgagagcgtcaccttc
cccgactggttccccaacgcgtggggtagcttcgtcatgggcttcttcgtgcccatgcgc
cagtcgccattctttgccagacatgcgaacgagttcttgatgctcgtgatagcgaaagcg
aagacatggaccaagcgacgacgaaaagagggcacctcccgagcactcgaagctggagga
ggtggcggtccatccacggtggttgctggcgaggtggaggtgcacgacgttgcggaagcg
agcggtgaagagtcaacaaagggcaaggagcggatggacgacgaagagggtacccagcca
ccggagaacccgcctgctggcgatgaggaacacatgcggcaacagcaggaaaagcgacca
gcggccacccactggaaggtcacccgtgccgacttgctgtactgcctcctgctctcatcc
agcgtagcgcttctctgcttgctgtggctccttctggaagagtacggcggtgtaaccaag
cgctacatctggatagcctgcctctttgccccctgtggagccatgcttcgctacgtgctg
tcgcgctacaacgcctggcggcggtgcgttcgcttcccgttcttcaccttcctcgtcaat
atcgtgggctccatcgccctcgccctggtcgtcatcagcgtcgatctccgtggctacgat
atcgatcacgagcttcctggctacactcttcacgggtttcaggtcggcttcttgggctcg
ttgacgaccgtatccacgttcattggcgagctgtatgccctcccatcagtgccctatgcc
tacatctacgccgtcgcatctctgggcacagcgcaggccgccctcacctcatcaacggcc
ttcaccagtggacagcatgaccggtgtgcggcacccaaggattttacgaaaaagaaagcc
aagctgggcaagaaggcgaagccctcggggaaccagaccgtcactgactttcgagctcgg
tcgatcgttcttccggagcagagccttctccaggacaagggcacggtggtgaacaagcgc
aacctctccctgcaagacctcttgtcccaatgcgctcactacaacgccaacgtccgcaaa
gaggccgtgctcggcatgaaggacctcttttctctacacccgcaaagcctggggtcatca
ttggctcggctatttgacaaggtgttcgacctgatcagcgacgaggacctctacgtgcgg
caggctattcgcaccctctttgagttccttttgcctctcattccagcgccatacatgaag
ttgttcgtcatttacctcaccaacggcatgaccaacatcaaccttgacgtacgtctgtca
gcgcttgagctaattaagctggtcattgtccacttgcccgagtttctgcctaccttctac
atcgagctgttgcccaactttctggatcttcttgcctcggtgggcttcggcacacgaagc
agcacactgcccagggacacctccaagaagaccggctttcagaagcacttgcccatattg
aagagcctttaccatctgctcaagtcagtccacgcgtacaagactgcgcaggcgtcggaa
cagcagtcctccacctccacctcggccagttccacgtccgccttctcttgggattggacc
gagtacaagaggcgatggccacaggctcacgctcgcttctttatgacgaagggcgccact
gggagcaacgttgagtccatgatcgaccagaattcgcctgtcttgatctcagacttttct
aagaagatcatcccttccctgctcaagcggtggctcgagtgctcgccttctgatcccttc
acctctacggccaacctggaatgcatggctcttgtgctcgacatcatccacatgctcttc
atactcaacgacaaggccaacaaacgtaaggagggcgagcacgcggcagcgagtcagacc
tccgtcgtcttcggcagcttcctggctgatttcaagaaatacctcatgccccacttcccc
atcagcgaacccatcagcaagtcggtcgaggacaagaaatcgaaggagggcgcaaacatg
cgattgacggtcagtcgcctcaactgcacgctctgtgcggtcatggcccacttcgtcgag
cccaaagctatcgaggaaatagagatggagctggaggccgagaagagtcggccggctcca
ccgactgctgcgccgctgccggccttcttgcagaagagggacgacaaggcgcgggacccg
gacgacgacgtgatgaagactctccatgaatcgaaccggccagacaagtggatgaccgcg
ctctatcggcacattgtcaagaagctgaaggacaaggagaccgccggcaacaagggcatg
gtgcaagaggtgtcgctgctccttccagttgtacagaagctcctgccggcgctgtctcct
cctttgcagacgcaactcatggaggcgttccattcgttctacctggcttgccacatcatg
tcgcaagcaaagcgcaagtgcatcaagtggatcgtggtgctgctcaccacgcccgcgcat
acccgtggcgggtggtcgcccgactcgaccatgacccagcagtggattctctccttcccg
cagatcctgtggaagctccaggacaagaacaccaccacgactcagcttattctcaccact
ctggtggagttgatcaaccgaaagcgccatgactcggaggccctgcacacgagcttgcaa
tccctcaaggaccacctggtccccttcttcttcacccaggtcccggccacgaaaacgcgc
aaggcatccaacatctacggtcccttcgtgctgctgccggaggagctccagaggctggcc
ctgcagctcgtctactacttcgattccctgccggccaagctcctcaaagccctcaccgct
tgctcgcgtaatctcaacatgtcggtgctccgctacatgaccgagattctctaccattcc
tacgtcaagggcgccttgtctcaattcgaactggcctctaccgtgctctcgctgttggtg
gccaactcggccaaccgcaagtaccaggagcgggccgacgaggatgaggatgacgacgga
gaggaagtcgaggaactggcgccgcaggtgcgcaagaggacgcgaaccagtagtgaggcc
acgacgtcgacatcaacgtcgacctcgacacagaagcaaacgcgatctcgagcagtgaag
gacactcagaaggggaaggagaaagagaatgaaatggaggtggtggttatggatgctgac
gacgacgagggcgagccagtggtggaagatcgagtcgccgccgctggtggcgagaaagcc
gcggccaaggcggaacgagcgcgtgcggagagacgcgaggtggccgagatcatcgtggct
aacgtgcgtctgtggggcgttacggaagcgctcgagtccatgcaggccatgctcaccctc
cttctgaccacggaggcgacggacgtggagacgaaggaggcgctgctgctcttcctctgc
ctctgcgctcggacccgtcgggcgtcccacgacggtggcactgaagcggccccgactggg
ctgcctcagggcctggccgcggtgatgccgcaggccatcttcgcctccctgacggccgac
tggcagcaggccgaggagtcgctcgccgcgaagcggtacgagtcggtgctcgacatcctg
gcgtccgattcgagcatcctctccgcctaccttgccctcctcctcgacaagctcgacggc
cagcgagatcaggtgctccatttggttctgtctctggttctcgagagtcgcctgcagccc
atgttcgccgctgccgacatcagaagccgactccagccgctcgcctccgctctcctccag
ggaacggacacgctgacaccggcccagcacaagctccaggtcgagatgcagctgctctac
ggctccttttga
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