KEGG   Acanthamoeba castellanii: ACA1_374710
Entry
ACA1_374710       CDS       T02667                                 
Name
(RefSeq) WD domain, G-beta repeat-containing protein
  KO
K14406  cleavage stimulation factor subunit 1
Organism
acan  Acanthamoeba castellanii
Pathway
acan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    ACA1_374710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acan03019]
    ACA1_374710
Messenger RNA biogenesis [BR:acan03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     ACA1_374710
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd CSTF1_dimer Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_IFT122_1st Beta-prop_WDR41 NBCH_WD40 Cytochrom_D1 VID27 Beta-prop_VPS8 WD40_MABP1-WDR62_1st PEP5_VPS11_N Beta-prop_SPT8 eIF2A DUF5061 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 14912789
NCBI-ProteinID: XP_004334415
UniProt: L8GHC6
LinkDB
Position
Unknown
AA seq 392 aa
MDKRTLYQLIISQLHEDGFTDIASQLSNVTLIPRPPQVAPQRLYRLASQGRTREAGPGRE
KDKMAWDKEDDDDSGSVLLGATVRPKGLDFDREKRKLVATGSMDTSVKLADVEKMKAHGD
KKDHDHMDDGASRNVTRSFYDHSSTVTDVCFHPTTPLLASCSKDMSIKFFDYSKTHAKRS
VKFIQDAVRLRSIDFHPSGDFLLASGKDARIRLYDTRTQQAFVCPNAGDNHSSTVNMVRY
RNDGGVYASAGKDGNIKLWDTTSATCISTFPAAHSGNAVTSVQFSRNGRYLLSCGKDSTV
KLWDLSTTRPLRIYSGSVLSKRRLPATFSFSEDFVLAPDESGAVAVAWDTRSGDLLHRLT
GHNQLVRFIASSPVENALLTCSDDSRARFWVV
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggacaagcgtacgctttaccagctcatcatcagccagctgcacgaggatggatttacg
gacattgcctcgcagctctccaacgtgacccttatccctcgcccgccgcaagtggcacct
cagcgactctaccgactcgccagccagggccgcaccagagaagctggacccggacgcgaa
aaggacaagatggcctgggacaaagaggacgacgatgactcggggtcagtgctgctgggc
gccaccgtgcggcccaagggcctcgactttgatcgcgagaagcgcaagctggtggccacc
ggttcaatggacacctcggtcaaactggccgacgtggaaaagatgaaagcccacggcgac
aagaaggatcacgaccacatggacgacggagcctctcgaaatgtcacgcgctccttctac
gaccattcgtcgacggtcacggacgtctgctttcaccccacgacgccactgctggcctcc
tgttccaaggacatgtccatcaaattctttgactactccaagacgcacgccaagcgcagc
gtcaaattcatccaggatgcggtccgacttcgatcaatcgacttccacccgtcgggcgac
tttttgttggcgtctggcaaggatgcacgaatccgcctctacgacacgcgcacacagcag
gccttcgtatgccccaacgctggagacaatcactcatccacggtgaacatggtccgatac
cgcaacgatggaggcgtgtacgcgtcggccggaaaggacggcaacatcaagctgtgggac
accaccagtgccacgtgcatcagcacttttcccgccgcgcactcgggcaacgcagtgacc
tccgttcagttttcacgcaatgggcgatacctgctctcgtgcggcaaggactcgaccgtc
aagctctgggacctgtccaccacgcgacccctccgaatctactcgggctccgtgctaagc
aagcggagactccccgcgacgttcagcttcagcgaggactttgtgctggccccggacgag
tccggcgcggtggcagtcgcctgggacacacgctcaggtgacctgctccaccggctcacc
ggacacaatcagttggtgcgatttatcgcttcctcccccgtagagaacgccctcctcacc
tgcagtgacgactcccgggcacgcttctgggtggtctaa

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