Antrostomus carolinensis (chuck-will's-widow): 104518457
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Entry
104518457 CDS
T08541
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross-complementing protein 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104518457 (XRCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acar03041
]
104518457 (XRCC6)
03400 DNA repair and recombination proteins [BR:
acar03400
]
104518457 (XRCC6)
Spliceosome [BR:
acar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104518457 (XRCC6)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104518457 (XRCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
104518457
NCBI-ProteinID:
XP_010169082
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
CIRNVYTSKIISSDRDLLSVVFYGTEENKNSADFKHIYVLQELDNPGAKRVLELDQYRED
EGRALFRETFGHNADYSLGEALWACSNLFSDVRVRLSHKRIMLFTNEDNPHANDSAKAKL
ARTKAGDLRDTGIILDLMHLKKPGGFDISLFYRDIINIAEDEDLGIQPEESGKLEHLMKK
VRAKESKKRASARLNLYLNKDLSLSVGVYYLVHKAYKPYPVKLYRETNEPVKTKTRVFNG
KTGSLLLPSDTKRAQTYGNRQIVLEKEETEEIKRFESPGLFLIGFKPLSMLKQHHHIKPS
QFIYPEESLVSGSTTLFNALLIKCLEREVMALCRYTARRNSPPRFVALVPQEEEVDEQKV
QTAPPGFHIVFLPYADDKRNVDFTEKVPASQEQVDKMKEIIQKLRFKYRTDSFENPVLQQ
HFRNLEALALDMMEPEQAEDLTMPKTEEMNRRLGNLVEEFKQLVYPPDYNPDGKAVKRKQ
SSDGLTEKRPKVEVSKDELWNHVQKGTLGKLTVPVLKDACRLYGLKGGGKKQELMDALTE
YFSEH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
tgcatccggaacgtctacaccagcaaaattatcagtagcgacagagacctgttaagtgtc
gtgttctatggtacagaagagaacaagaactcggcagatttcaagcacatctacgtactt
caggagctggataatccaggtgcaaagcgtgttctagagctggaccagtacagggaggac
gaaggacgagcgcttttccgtgagacctttggccacaacgctgactattcactgggtgaa
gcactctgggcctgctccaatctcttcagtgatgtccgagtcaggctgagccacaaaagg
atcatgctcttcaccaacgaggataaccctcatgccaatgacagtgctaaagccaagctg
gccaggaccaaagctggtgatctgagggacacaggtatcatcctggacttgatgcacttg
aagaagcctggagggttcgatatctctttgttctacagggatatcataaacatagcagag
gatgaggaccttgggatccaacctgaggagtcagggaaactggaacatctcatgaagaaa
gtacgagcaaaggagtcaaagaaacgggcttcagccaggttaaatctgtatctgaacaaa
gatctgtcgctttctgtcggtgtttactaccttgttcataaagcttataagccctatcca
gtgaagctttatcgggaaactaatgaaccagttaaaacaaaaacaagggtgtttaatggg
aaaacaggcagcttgctccttcctagtgacacaaaaagggctcagacatatggaaaccgc
cagattgtgctggagaaagaggaaacagaagaaataaaaaggtttgagtctccgggcttg
tttctgattggcttcaaaccactttcgatgctaaaacagcaccaccatatcaagccctcc
cagttcatctaccctgaggagtccctagtaagtgggagtacgacgctatttaacgcctta
ctgatcaaatgcttggagagggaggtgatggcactgtgcagatacactgcccgccggaac
agtccccctcgctttgtggctctggttccccaggaggaagaggtggatgagcagaaggtg
cagacagcccctccaggcttccatatcgttttcctgccatacgcagatgacaaacggaat
gttgattttacagaaaaggtgccagccagtcaagagcaggtggacaaaatgaaggaaata
atacaaaaactccgtttcaaatacaggactgacagctttgagaacccagttttgcagcag
cacttcaggaatctggaggctttagcgctggatatgatggaaccagaacaagctgaggat
cttacaatgccaaagactgaagagatgaaccgcaggctgggcaacttggtggaggagttc
aagcagctggtttatccccctgactacaatcctgatgggaaggccgtaaagcgaaaacaa
agttctgatggtctgactgagaagaggcccaaggtagaagtctcaaaagatgagctgtgg
aatcatgtgcagaagggcactctaggcaagctcactgtacctgttctgaaggatgcctgc
aggctttatgggctgaagggtggggggaagaagcaggagctcatggatgcgctaactgaa
tacttcagtgagcactaa
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