Antrostomus carolinensis (chuck-will's-widow): 104522157
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Entry
104522157 CDS
T08541
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104522157
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acar02000
]
104522157
Transporters [BR:
acar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104522157
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Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104522157
NCBI-ProteinID:
XP_010162680
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MTAEKTIPIINGKPEDALDPEASSTNLIHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWATCGHEWNTENCVEFQKLNMSNCS
QLSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGK
VVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKIFRR
GYRRELLILGLSIVSYFIGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYG
SNRFYENIEDMIGYKPLSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNIYIYPDWGYG
IGWMMALSSMICIPLWICIKLWKTEGTFTEKFRKLITASSDLKMRGKLGGGAYIAAMNDC
NAKLKGDGAISTITEKETHF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagactattcctataattaatggcaagccagaagatgctttggacccg
gaagcctcaagtaccaacctcatccacagcaatgataagaaagttcatgaaagaggtcac
tggaacaataaggttgaatttgtgctttctgtggcaggggagattattgggttgggaaat
gtatggagattcccatatctttgctacaagaatggaggaggtgcttttctcatcccatac
gtggttttttttatttgctgtggaataccagtatttttcttggagacagccttgggacag
tttactagtgaaggaggcattacatgctggaggaaagtttgccctctatttgaaggcatt
ggatatgctacccaagttatagaggcacatctaaatgtatattacatcatcattttagca
tgggctatcttctatttgtttaactgctttactacagagcttccttgggctacctgtggg
catgaatggaatacagaaaactgtgtggaatttcaaaaacttaatatgagcaactgcagt
caactctctttacaaaatgccacttctccagtgatggaattctgggaacgaagggtgctg
gctatatctgatggaattgaacatattgggaatcttcgctgggaacttgcactgtgcctt
cttgctgcttggactatctgttatttttgcatttggaaaggaacaaagtctactggaaag
gttgtgtacgtaacagccacattcccctacatcatgttgatgattcttctgattcgtgga
gtaacgttaccaggtgcttcagaggggataaaattctacttgtaccctgacctttctcga
ctgtctgacccacaggtttgggtggatgccggtacacagatatttttctcttatgcaatc
tgcttgggatgcttgacagccctgggaagttacaacaactataacaataactgctacaga
gactgcatcatgctctgctgcttgaacagtggcacaagctttgttgctggttttgctatc
ttttcagttcttggatttatggcttacgaacaaggcgtgcccattgcagaagttgcagaa
tcaggaccaggacttgcattcattgcttaccctaaagctgttaccatgatgcctctttct
cctctgtgggcaactctcttcttcatgatgcttatattccttggattagacagtcagttt
gtgtgtgtggaaagccttgtgacagctgttgtagacatgtacccaaagattttccgaaga
ggctacagaagagaactgttgattctcggcctttccattgtgtcatacttcattggccta
ataatgttaaccgagggtgggatgtacgtctttcagttatttgactcgtacgcagctagt
ggcatgtgcctgctttttgttgccatatttgaatgtgtctgcataggctgggtttatggc
agcaatcgcttttatgagaacattgaagatatgattgggtacaaaccactgtcattgatt
aaatggtgctggatggtcttaactccaggtatttgtgcaggaatcttcatctttttcctg
gtgaaatataagcctttgaaatacaacaatatatatatataccctgactggggctatggc
atagggtggatgatggcactctcttccatgatctgtatccctttgtggatatgcattaag
ctgtggaagacagaaggcactttcacagagaaattcaggaagttgattacagctagttca
gatctgaaaatgagagggaagcttggaggaggagcctacattgcagcaatgaatgactgc
aatgcgaaactgaaaggagatggtgccatttcaaccattacagaaaaggagacacatttc
tga
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