Aquarana catesbeiana (American bullfrog): 141107455
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Entry
141107455 CDS
T11018
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141107455 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acat03000
]
141107455 (PHF1)
03036 Chromosome and associated proteins [BR:
acat03036
]
141107455 (PHF1)
Transcription factors [BR:
acat03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
141107455 (PHF1)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
141107455 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
ASH2L-like_WH
DUF4537
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
141107455
NCBI-ProteinID:
XP_073454293
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All DBs
Position
LG09:complement(30425817..30506344)
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AA seq
544 aa
AA seq
DB search
MEGRETPTRPSRTSPASPRVTPALVKRPRFQTLARFWEGQDVLARWTDGLLYLGIIKKVD
SAQETCLVRFEDNSQFSVLWKDIFPPAVPGKEQLCCVCNSQSCTSDNKLVHCGKCKHAYH
QECHVPSVPGDTDSPGSSWMCRQCVFAVATKRGGALKKGPYARSMLHMKLSLPYQLKSLE
WDPLHLTNKQQCYCYCGGPGEWNMKMLQCCRCLQWFHESCTQCLSKPLLYGDRFYIFECS
VCTRGPENAWRLPLAWVDVSHLVLYHLSICCKKKYFDFEREILSFVNENWESLLLGDLTD
TPRTERYSNLLHALTAQKDRFISGKEIKKKKCLFGLQSRVPPPAPQSTVTELRLQDTDVR
SPTPCVSSLSGRMGVLKRPPHKTKTPSIVQRTRKERQKLQRAVTQDAIQNPISPNQEYVG
YRGSTYNFRRTGARCLQSHPIRMFASFHPSANTSGSVAASLQSSEVTPAISEGSTLLSEV
LDSSAPVASPSKTSTSPPRPSSSSSSEGCDWSETVEQGMRVLAKRVTAEGNTQYLVEYEE
GGIF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagggagaccccgacccgacccagccgtaccagtcccgccagccccagggtc
acccctgctctggtgaaacgcccccgatttcagacactggctcgcttctgggagggtcaa
gacgttttggcccggtggacggacggactgctgtacctgggcattataaagaaagtggat
agtgcacaagagacgtgtctggtccgctttgaagataactcccagttctcagtgctgtgg
aaggacatctttcctcctgccgtcccggggaaggagcagctgtgctgcgtgtgtaactca
cagtcgtgtacctctgacaataaactcgtgcattgtgggaagtgcaagcacgcttatcac
caggaatgccatgttcccagtgtccccggcgatacagatagtcccggcagttcctggatg
tgcagacaatgtgtctttgctgtggctaccaagagaggtggcgctctcaaaaagggcccc
tatgcccgctcaatgctacacatgaaactgtctttgccctaccagttgaagtctttagag
tgggacccacttcatttaaccaataaacagcagtgttactgctactgcggggggcctgga
gaatggaacatgaagatgcttcagtgctgtcgctgtcttcagtggtttcatgagtcttgt
acacagtgtctgagcaaaccccttttgtacggagacaggttttacatttttgagtgctca
gtctgtacgcgaggtccagaaaacgcctggagacttcccctggcatgggtggacgtttca
cacctcgtcctatatcacctcagtatttgttgtaagaagaaatattttgattttgagcgg
gagatcctgtcctttgtaaacgaaaactgggagagtcttttattaggagatctcacagat
actcctcgaacagaacggtactctaatctgcttcatgctctgacagctcagaaagacaga
tttatttccgggaaggagatcaagaaaaaaaagtgtctatttgggctgcagagccgtgtt
ccccctcccgccccacagagtacagtgactgagctgaggctacaggacacagacgtaagg
agccccactccttgtgtaagttccctttcagggaggatgggggtcctgaaacgcccccca
cacaaaacaaagacgccaagcatagtgcaaaggacgcggaaggagaggcagaagctgcag
agagctgttacccaggatgcgatacaaaatccaatcagtcctaaccaagagtatgtggga
taccgcggcagcacctacaacttcagacgcaccggcgcacgctgcctgcagagccatccg
attcggatgttcgcctcttttcacccctctgccaacacctccggatctgtagctgcttct
ctgcagtccagcgaggtgactcctgccatctcagaaggttccaccctgctgtctgaagtt
ttggactcatcagccccggtcgcctctcccagcaagacttcaacctctcctcctcggccc
tcatcctcttcctcttcagaaggttgcgattggtcagaaactgtggagcagggaatgcgc
gtgctggccaagcgggtcaccgcagaagggaatacccagtatctggtggagtatgaggaa
ggcggcatcttctga
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