Aquarana catesbeiana (American bullfrog): 141112652
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Entry
141112652 CDS
T11018
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141112652 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141112652 (CNOT1)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141112652 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141112652 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
141112652
NCBI-ProteinID:
XP_073461733
LinkDB
All DBs
Position
LG11:complement(252991317..253065091)
Genome browser
AA seq
2423 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQLEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVLK
LSKVQEVIFGLALLNSCNSDLRGFAAQFVKQKLPDLLRSYVDVDVSGSQEGGFQDIAIEV
LHLLLSNLLFGQKGAFGVGQEQIVAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
SDSGGITKTMMDSSLADFMQEVGYSFCSSVEECRNIIVQFGVREVTAVQVARVLGMMART
HSGLTDGISLQSISAPGSGIWSDGKDKNDGVQAHTWNVEVLIDVVKELNPNLNFKEVTYE
LDHPGYLIRDSKGLQTVVYGIQRGLGMDVFPVDLIYRPWKHAEGQLSFIQHSLMNPDIFC
FADYPCHAVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSYPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQARLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFVQACMTFLKRRCPSILGGMAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSTSSLDAISPVQIDPLAAMASL
SIGGSAAPHTQSLPAFPPNLGSAFSTPQSPAKAFPPLTTPNQSTAFSGLSGLSSQLPGGL
GTGSLSGMSTGGLGLPAVNSDPFGQRKLSTSGLNQPTFQQTDLSQVWPEANQHFTKEIDD
EANSYFQRIYNQPPHPTMSVDEENTTPVPTRMLTALEYEVLEMLQRFKDSNIKREREVFN
CMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSK
MYFFGIAALDRFKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSI
TTPGSIALSQAQAQAQAQAPAKAPLPGPVSTNTVTTSTATTSAKTVTITRPTGVSFKKDV
PPSINTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKDEF
MPWVSQYLVMKRVSIELNFHSLYSNFMDALKHAEFNKMVLAETYRNIKVLLTSDKAAANF
SDRSLLKNLGHWLGMVTLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESS
VRSVVFRPPNPWTMAIMNVLSELHQEHDLKLNLKFEIEVLCKNLTIDINDLKPGSLLKDQ
DRLKSLDEQLSAPKKDVKQPEELLPSIPSANEYAIRTAGKLWASVEKQESDAVFTVNCFP
SATATAPPPSTTCAATVPPQPQYSYHDIHVYSLAGIAPHITLNPTIPLFQTHPHLKQYVR
QAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVAAHHMMRNLTAGMAM
ITCREPLLMSIATNLKTSFATSMRAASPQQREMMEQAAAQVAQDNCELACCFIQKTAVEK
AGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEE
FARNVPGFLPTNDLTQPTGFLAQPMKQQAWATDDVAQIYDKCIGELEQHLHAIPPTLAMN
PQSQALRGLLEAVALARNTRDAIAALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLK
ALQDSRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDVHLAQSMENG
LNYMAVAFAMQLVKILLVDERSVSHVTEAEFFHTIETLMRINAHSRGNAPEGLPQLMDVL
RSNFEAMIERAQGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDST
KAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCY
HNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHEVRQSEFQQLPYHRI
FIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKASGFVYAWLELISHRIFIARMLA
HTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDY
HYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMP
SQFKKDLDSYLKTRSPVTFLSELRSNLQVSNDPGNRYSIQLINALVLYVGTQAIAHIHNK
GSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFA
EANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLF
QSVAQCCMGQKQAQQVMEGSGAS
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctttcgctggccttgtctcaaatcagctaccttgtggacaactta
acgaagaaaaactaccgggccagccagctggaaatacaacatattgtgaatcggcacggt
ccggaggcagacagacacttgttacgctgcctattctcacatgtggatttcagtggcgat
ggtaaaagcagcggtaaagattttcatcagacgcaatttctgattcaggagtgtgcatcg
ctgatcaccaagcctaacttcatctccaccctctcgtacgccattgacaatccattgcac
tatcagaagagcctgaagccatcgccccacctttttgcccagttgagtaaagttctaaag
ctcagcaaagttcaggaggtgatctttggcttggcccttctgaactcctgcaacagcgac
ctgcgaggctttgctgcacagtttgtgaagcagaaactccctgatctcttgcgttcctac
gttgacgtggacgttagtggcagccaagaaggtggattccaggacattgccatagaggtc
ctgcacctcctcctctccaatctcctttttggccagaaaggagccttcggggtgggacag
gagcagattgtggcatttcttaaaaccctgcgcagagatttcccccaggagcgctgtccg
gtggtgcttgcaccacttctctaccctgaaaaacgggacatcctaatggaccggatttta
tctgattctggcgggataaccaagaccatgatggacagttccttggcagacttcatgcag
gaagtgggttacagcttctgttccagtgtggaagaatgccgcaatatcatcgtccagttt
ggtgtccgggaagtgactgcggtgcaggtcgctcgggtcctggggatgatggcgcggacg
cattctggactcacagatggcatctccttacagtcaatctccgcccctggcagcggcatc
tggagtgatggcaaggacaagaatgatggcgtgcaggctcacacttggaacgtggaggtt
ctgattgatgtagtaaaagagctgaatcccaacctgaacttcaaggaagtgacgtatgag
ctggatcatccagggtacctgatccgtgacagcaaggggctccagactgtagtatatggc
atccagagggggcttggcatggatgtattcccagtcgatctcatttataggccttggaaa
cacgcagagggccagctttccttcatccagcattccttgatgaatccggacatcttttgc
tttgctgactacccttgccatgctgttgcaactgacatcctaaaggctccaccagaagat
gacaatcgggagatagctacatggaaaagtttggatctgattgagtccctgcttcggctg
gctgaggtgggccaatatgaacaggtcaaacagctcttcagctaccccatcaaacactgt
cctgacatgctggtcctggcactgctccagatcaacacttcctggcataccctaagacac
gagctcatctctactctgatgccgatctttctgggtaaccatcccaactctgccatcatt
ttgcactatgcatggcacggccagggccagtctccctccatccgccagctgatcatgcat
gccatggcagagtggtatatgcgaggtgagcagtatgatcaggcccgcctgtctcgtata
cttgatgtagcccaggacttgaaggccttgtcaatgctgctgaacggtactccatttgcc
tttgttattgatcttgctgcacttgcgtcacgccgggaatacctcaaactggataaatgg
ctgactgataaaatacgggaacatggggagccctttgtccaagcctgcatgactttcctc
aagcggcgctgtccttccatactgggcggcatggctcctgagaaagaccagccgaaaagc
gcccagcttcctcctgaaactctggccacgatgctggcatgccttcaggcttgtgcaggg
agtgtgtcccaggaactttctgaaaccatccttaccatggtggccaactgtagcaatgtg
gtaaacaaggcacggcagcctcctccgggagttatgccgaaaggtcgtcctcccagtacg
agcagtctggacgccatctctccggtacagatcgaccctctggctgcaatggcctctctc
agcattggtggttctgctgctcctcatacacagagccttccagctttccctcccaacctg
ggctcagctttcagcacaccacagtcaccagccaaggcatttccccctctcacgactcca
aaccaatctactgcttttagtggcctcagtggtctctcctcgcagctgccaggtggcctt
gggacaggcagtctatctggaatgagcactggaggactgggccttcctgctgtgaatagt
gacccgtttggacagaggaaactcagcacttcagggctcaatcagccaacattccagcag
acggacctgtctcaggtatggccagaagcaaaccagcactttactaaagaaattgatgat
gaagcaaacagctacttccagcgtatctacaaccagcccccgcaccccacaatgtcagtg
gatgaggagaacaccacccccgttccaaccaggatgctcactgctcttgaatatgaggta
ttggaaatgctgcagaggtttaaggactccaacataaagcgggagcgtgaagtcttcaac
tgcatgctgcgcaatttgtttgaagagtatcgtttcttccctcagtacccagacaaggag
ttgcatattactgcctgtttgtttggtggcatcattgaaaaaggactagtaacatacatg
gctttaggactggcactgcgctatgtactggaagcactgcgcaaaccttatggatccaaa
atgtatttctttggcatcgctgcactagataggttcaaaaacaggttgaaggactatcct
cagtactgtcagcacttggcttccatcagtcactttattcagttccctcatcatttgcag
gagtacatagagtacggtcagcagtctcgggaccctccggtcaagatgcagggatctatc
accaccccaggcagtattgcactttcacaagcccaggctcaggcacaagcccaggcccct
gccaaagctcctcttcctggccccgtaagcaccaatacagttaccacatctaccgccaca
acctcagccaaaactgttaccatcaccaggcccaccggcgtcagtttcaagaaggatgta
ccgccgtccatcaacactaccaacatagacacacttctagtggctactgaccagacagag
aggattgtggaaccacctgagaatgtgcaagagaagattgccttcatattcaataacctg
tcacagtccaacatgacacagaaggtggaggagttgaaggaaactgtgaaagatgagttc
atgccttgggtgtctcagtacctagtgatgaagagggtgagcatcgagctgaactttcac
agtctgtactccaacttcatggacgctctgaagcatgcggagttcaacaagatggtttta
gcggagacctacaggaacatcaaggtgttgttgacgtctgacaaagctgctgctaatttc
tctgaccggtctttgctgaagaacttgggccactggctaggcatggtcaccctggccaag
aacaaacccatcctgcacacggacctggatgtgaagtcgctgctgctggaggcctatgtg
aagggacagcaggagctgctctacgtggtgcctttcgttgctaaagtcctggagtccagt
gtcaggagtgtggtttttcgacctccaaatccatggacaatggctattatgaatgttttg
tcagagcttcaccaagagcatgatttgaagcttaatctgaagtttgagattgaggtcttg
tgtaaaaatttaaccattgacatcaatgacttgaagcctggaagtctccttaaagaccag
gaccgtctaaagtctctggatgagcagctttctgccccaaagaaagatgtaaaacagcca
gaggaactactgcctagcatccccagcgccaatgagtatgccatccgcacagcaggcaag
ctctgggcttcggttgagaaacaggagtccgatgctgtctttacagtgaattgtttcccc
tcagctacggcgacagccccgccccccagcaccacgtgtgctgcaacagttcctccacag
ccgcagtacagctatcatgatatccacgtctattcgcttgctggtattgcacctcacatc
acactcaatccaacaatccctctcttccaaacccacccccacctcaagcaatatgtgcgg
caggccattgagcgggctgtgcaggagcttgtgcatcctgtggttgaccgttccataaag
attgcaatgaccacctgtgagcagatcgtgcggaaggactttgcactggattcagaggag
tctcgaatgcgggtggcggctcaccatatgatgcgcaatctgactgctggcatggccatg
ataacatgcagggaacctctgctcatgagtatagctaccaatctgaaaaccagctttgcc
acctcaatgcgggctgcctccccccagcagcgggagatgatggaacaggctgctgctcag
gtggctcaggataactgtgagctggcttgctgcttcatccagaagacggcagtagagaag
gctggaccagaaatggacaagaggttggccacggaatttgaattacggaagcatgccagg
caggagggacggcgatattgtgatcccgttgtactgacctaccaggcggagcggatgcca
gagcagatccgactaaaggtcggaggtgtggaccccaaacagctggctgtttatgaggaa
tttgcacgcaatgttcctggcttccttcccaccaatgacttgactcagcccacgggattc
ctggcacaacccatgaagcaacaagcctgggccacagatgatgtagcacagatttatgac
aagtgtatcggtgaactggagcaacatcttcacgccatcccacctacacttgccatgaac
ccgcagtctcaggctctgcgaggtctgctggaagctgtagcactggcccggaacaccagg
gatgccattgctgctctggggctgctgcaaaaggctgttgaaggactgttggatgccact
agtggtgctgatgcagaccttctgctcagatatcgggaatgtcatttgctcgtcctgaaa
gctctgcaggacagccgggcctacggttctccttggtgcaacaagcagatcaccagatgt
ctgattgagtgtcgggatgagtacaagtacaatgtggaggctgtagagcttctgattaga
aaccatctcgtcaacatgcagcagtatgatgtccacctggcacagtcaatggagaacggg
ctgaactatatggcagtggccttcgctatgcagcttgtgaagatcttacttgtggatgaa
cgcagcgtgagtcatgtgacggaggcagagtttttccacaccatagaaactctaatgcgt
atcaatgcgcactcaaggggcaatgcccctgaaggacttccacagctgatggatgtgctc
cgctctaatttcgaggccatgattgaacgggcccagggtgggcctaacttcatgatgcat
tctggaatatcccaagcatctgagtatgacgatcctccgggactccgggaaaaggcagag
tatcttctgagagaatgggtcaatctatatcactcggctgctgccggacgggacagtaca
aaggccttttctgcatttgttgggcagatgcaccagcaaggaatcctaaagaccgatgac
ctcatcacccggttcttccgcttgtgtacagagatgtgtgtggaaataagctaccgtgct
caggctgagcagcagcacaatccagctgccaaccccacgatgatccgagcaaagtgctac
cataacctggatgcctttgtcaggctgattgctctgttagtcaaacactctggagaagcc
accaatacagtcaccaagatcaatcttcttaacaaagttctcggtattgtagtgggggtt
ctgctccaggatcatgaagtgaggcagagtgagttccagcagcttccataccatcgcatc
tttattatgctgctgctggagttgaatgcaccggaacatgtgttggaaacaatcaacttc
cagaccctcactgccttctgcaacaccttccacatcctccggcccaccaaagcatccggc
ttcgtctacgcatggctagagctaatttcccaccgtatctttattgcacggatgttggca
cacactccccagcagaagggatggccaatgtatgcccaactactgatcgacctcttcaaa
tatctggccccatttctccgaaatgtggaactcaccaaacctatgcaaattctgtacaag
ggcacgctgcgtgtgctgctggttctgcttcatgacttcccagagttcctttgtgattat
cactatggcttctgtgacgtcatcccacccaattgcatccagctgaggaatctaatcctg
agtgccttcccccgaaacatgagacttccggaccccttcacccccaacctcaaggtggac
atgttgagtgagattaacattgctcccagaatcctcacaaacttcaccggagtgatgcca
tcacagttcaagaaagacctggactcctacctgaagactcgctcaccagtgaccttcctg
tcggagctacgcagcaatttgcaggtatctaacgatcctggaaaccgctacagcattcag
ctcatcaatgcgttggtcctttatgttggcacgcaggccattgcacacatccacaacaaa
ggcagcacgccatccatgagcaccatcacccactctgcccacatggacatcttccagaac
ctggcggtggacctggacactgaagggcgctaccttttcctgaatgccattgccaaccag
ctgcggtaccccaacagccacacgcactactttagctgcaccatgctgtacctctttgct
gaggccaacactgaggccatccaagagcagatcactcgggtcctgttggagcgactgatt
gtgaacagaccacatccgtggggtcttctcatcacctttattgagctgatcaaaaatcct
gctttcaaattctggaatcacgaatttgtgcactgcgctccggagattgagaagttgttc
cagtcggtggcccagtgctgtatgggacagaagcaagctcagcaggtgatggaaggttcc
ggtgccagctag
DBGET
integrated database retrieval system
