Aeromonas caviae: VI35_18775
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Entry
VI35_18775 CDS
T05190
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
acav
Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acav03016
]
VI35_18775
Enzymes [BR:
acav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VI35_18775
Transfer RNA biogenesis [BR:
acav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VI35_18775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ATP91852
LinkDB
All DBs
Position
4051545..4053566
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AA seq
673 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQAVTRFVGRVKMFRDRLNVVPDHPLIKDAIKARAKKGLDE
KSFKEGDWVVATLKRHALVDGNFSAEITQLIATQEDHNVPWWVVLARHNLAQIEPADLPE
WKVIEEEELPRRDLTQVPFFTIDGAKTKDMDDALAITKLENGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARINSHARLSYDDVSDWAEHGKALDIDAGVLAQLPLMKAMTEARIKWRTEHALVFPD
RPDYDFELGEDGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKEVGYGIFNVHTGFD
EESLDGAIELLKTAEAPFEKEDIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLQENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVDLVPGPAPVAPASE
ADTAPADEAPKAQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgcactgaaaaagagaaagaggtggccgagccggatgccctgctggaa
caggccgtcacccgcttcgtcggccgcgtcaagatgttccgcgaccgcctcaacgtggtg
ccagaccaccccctcatcaaggacgccatcaaggcccgcgccaagaagggtctggacgag
aaatccttcaaggaaggggactgggtggtcgccaccctcaagcgccatgccctggtagac
ggcaacttctccgccgagatcacccagctcatcgccacccaggaagatcacaacgtgccc
tggtgggtggtgctggcacgccacaacctggcccagattgaaccggcggacctgccggag
tggaaggtgatcgaagaggaagagctgccccgccgggatctgacccaggttcccttcttc
accatcgacggtgccaagaccaaggacatggacgatgccctggccatcaccaagctggag
aacggctgggagctgctggtggccatcgccgacccgaccgcctatgtggccgaggggagc
gagctggacaaggaggccgcccagcgcgccttcaccgtctacatgccggggcgcaacgta
cccatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacaccctgtgcgcccgtctgctcatcgccgaggacggcctgctgctggaggagaccgag
ttcttcgccgcccgcatcaattcccatgcccgtctcagctatgacgacgtctccgactgg
gccgagcacggcaaagcgctggatatcgacgccggcgtcctggcccagctgcccctgatg
aaggcgatgacggaggcccgcatcaagtggcgcaccgagcacgccctggtgttcccggac
agacccgactacgacttcgagctgggtgaagacggcgaagtgctggccatccacgtggag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggccgcgtgctgggcaaagaggtcggctacggcatcttcaacgtccacaccggctttgac
gaggagtccctggacggcgccatcgagctgctcaagaccgccgaggccccgttcgagaag
gaagatatcgcgagcctctccggcttctgcgccctgcgccgctggatagacaacctggac
acccgctggctggacggcaagatccgccgcttccagagctatgcgctgatgtctgccgag
cccggtgcccactatggcctggggctggacgcctacgccacctggacctcccccattcgc
aaatacggcgacatggtcaaccatcgcctgctcaaggccgtcatcgccggcaagaccccg
ggtgagcgcccaagcctggagctgaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtgcgctacctcaaggccgatgcgggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgc
ctgcaggagaacggcgccgtggtcttcatgcccgcccgccatatcctggacaacaaggat
cggctggagtgcaactgggacaacggccgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtgaagctgaccgaggcggtggaagagacccgctccctc
atcgccaagccggcggtggatctggtgccgggtccggcgccggtcgctcctgccagcgag
gccgacacggcccccgccgacgaagcccccaaggcgcagtga
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