Aeromonas caviae: VI35_20430
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Entry
VI35_20430 CDS
T05190
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acav
Aeromonas caviae
Pathway
acav03030
DNA replication
acav03410
Base excision repair
acav03420
Nucleotide excision repair
acav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VI35_20430
03410 Base excision repair
VI35_20430
03420 Nucleotide excision repair
VI35_20430
03440 Homologous recombination
VI35_20430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acav03032
]
VI35_20430
03400 DNA repair and recombination proteins [BR:
acav03400
]
VI35_20430
Enzymes [BR:
acav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VI35_20430
DNA replication proteins [BR:
acav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VI35_20430
DNA repair and recombination proteins [BR:
acav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VI35_20430
NER (nucleotide excision repair)
GGR (global genome repair) factors
VI35_20430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ATP92108
LinkDB
All DBs
Position
complement(4385612..4388362)
Genome browser
AA seq
916 aa
AA seq
DB search
MASSNPLILVDGSSYLYRAFFASQQADLRTSTGLPSGAVRVMANMMRSLRKQYPDCHVAV
VFDAKGKTFRDDIYPEYKATRASMPDDLRSQVAPIHQMIKAMGFPFLMVEGVEADDVIGT
LARQATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDVKTDREGVIEKFGVPPELIIDYL
ALMGDKVDNIPGMTGVGEKTALALLQGIGSIDEIAANLDKVAALGFRGSKAFADKFREQE
EQVRLSYVLATIKTDVALEQSLEELQLGPIDKEALLAVYREYELRNLIKELESGGEESEA
AGDEEGATPVAAIETDYRCILDEAEFDEWLARLQAAPLFSFDTETTSLDYMEARVVGVSF
AIEPGKAAYVPFGHDYLGAPVQLTEAVVLGKLKPLLEDPARLKVGQNLKYDRNVLLNHGI
ELQGIAYDTMLESYVLNSTASRHDMDSLARRYLNVETISFEDIAGKGVKQLTFNQIELEQ
AAPYAAEDADITLRLHQALWGKLSAEPGLAKVFSEIELPLLPVLARMERLGTTIEPKLLH
QQSQEIEVRLAELEKQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGAPSTAEEV
LAELAETYELPQLLMEHRGLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGRLSSTD
PNLQNIPVRNEQGRRIRQAFIPCAGYKLVAADYSQIELRIMAHLSGDKGLLTAFAEGKDI
HKATAAEVFGVALDAVTSDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYMDLYFE
RYPGVLEYMERTRQQADAQGYVETLFGRRLYLPDIKSRNAGLRKAAERAAINAPMQGTAA
DIIKRAMINVDGWIRGIEDQSIRMLMQVHDELVFEIREEKLEEYIGLIKEKMSGAAELDV
PLVVEAGTGDNWDQAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcctctagcaatcctcttattctggtcgacggctcttcatatctttaccgcgccttc
tttgcctcgcagcaggccgatctgcgcacctcgaccggcttgcctagcggcgccgtccgt
gtcatggccaacatgatgcgcagccttcgcaagcagtaccctgactgccacgtggccgtg
gtgttcgacgccaagggcaagaccttccgtgacgacatctatcccgaatacaaggcaaca
cgcgccagcatgccggacgatctgcgcagccaggtcgcccctattcaccagatgatcaag
gcaatgggtttccccttcctgatggtcgaaggggtggaggctgacgacgtgatcggcacc
ctggcccgtcaggcgaccgagaaacagttgcctgtgctcatcagcaccggcgacaaggac
atggcgcagctggtctccgaccatgtcaccctgatcgacaccatgaaggatgtgaagacc
gatcgggaaggggtgatcgagaagttcggcgtaccgcccgagctcatcatcgattacctg
gccctgatgggggacaaggtggacaacattcccggcatgaccggtgtcggcgagaagacc
gcactggccctgttgcaggggataggcagcatcgacgagattgccgccaacctcgacaag
gtggcggcgctcggcttccgcggctccaaggcgtttgccgacaagttccgcgagcaggaa
gagcaggtgcgcctctcctacgtgctggccaccatcaagaccgacgtggcgctggagcag
agtctggaagagctgcagcttggtcccatcgacaaggaggctttgctggcggtctaccgc
gagtacgagctgcgcaacctgatcaaagaactggagtctggtggcgaggagagcgaagcc
gcaggtgatgaggaaggcgccaccccggtagccgccatcgaaaccgactatcgctgcatt
ctggatgaggccgaattcgatgagtggttggcacggttgcaggcggcgccgctgttttcc
ttcgacaccgagaccaccagtctcgactatatggaagcgcgggtcgttggcgtctccttt
gccatcgagccgggcaaggcggcctatgtgcccttcggccacgactatctgggggcgccg
gtgcagctgaccgaggccgtggtactcggcaagctcaaaccgctgctggaagatccggcc
cgtctcaaggtggggcagaacctcaagtacgaccgcaatgtgctgctcaaccacggcatc
gagctgcagggtatcgcctacgacaccatgctcgaatcctatgtgctcaactctaccgcc
agccgccacgacatggattccctggcccgcaggtatctgaacgtcgagaccatctcgttc
gaggacattgccggcaagggggtcaagcagctcaccttcaaccagatcgaactggagcag
gctgctccttacgcggcggaagatgccgacatcaccctgcgtctgcatcaggcgctgtgg
ggcaagctctctgccgagccgggccttgccaaggtattcagcgagatcgaattgccgctg
ctgccggttctggcgcggatggagcgactcggtaccaccatcgagcccaagctgctgcat
cagcagagccaggagatcgaagtgcgtctggcagagctggagaagcaggcccatgagctg
gccgggcaggagttcaatctctcctcgcccaagcagctgggtgaaatcctcttcaccaag
ctggggctgccgatcatcaaaaagacccccaagggagcgccatccactgcggaagaggtg
ctggccgagctggcggagacctatgagctgccgcaactgctgatggagcaccgtggcttg
gccaagctcaagtccacctacaccgacaagctgccgctgatgatcaagccgcagaccggg
cgggtacacacctcctatcatcaggcggtggcggcgaccggtcggctctcgtccaccgat
cccaacctgcagaacattccggtacgcaacgaacaggggcgccgcattcggcaggccttc
attccgtgcgccggttacaagctggtggcggcggactactcccagatcgagctgcgcatc
atggcccacctctccggtgacaaggggttgctgaccgccttcgccgagggcaaggacatc
cacaaggcgaccgccgccgaggtgttcggggtcgcgcttgatgcggtgaccagcgacatg
cgccgcagtgccaaggcgatcaactttggtctcatctatggcatgagtgccttcggtctg
gccaagcagctggggatcggtcgcgccgaagcgcagaagtacatggatctctacttcgag
cgctacccgggtgtgctggagtacatggagcgtacccgccagcaggcggacgcccagggc
tatgtggagactctgtttggccgtcgcctctatctgccggatatcaagtctcgcaacgcg
ggcctgcgcaaggcggccgaacgggccgccatcaacgcccccatgcagggtacggctgcc
gacatcatcaagcgggccatgatcaacgtggatggctggatccggggcattgaagaccag
tcgatccgcatgttgatgcaggtgcacgatgaactggtgttcgagatccgcgaagagaag
ctggaagagtacatcggcctcatcaaggagaagatgtcgggtgcggccgaactggatgtg
ccgctggtcgtggaagcgggtactggtgacaactgggatcaggcccactga
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