Acinetobacter oleivorans: AOLE_17995
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Entry
AOLE_17995 CDS
T01263
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acd
Acinetobacter oleivorans
Pathway
acd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOLE_17995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acd03021
]
AOLE_17995
03400 DNA repair and recombination proteins [BR:
acd03400
]
AOLE_17995
Enzymes [BR:
acd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOLE_17995
Transcription machinery [BR:
acd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOLE_17995
DNA repair and recombination proteins [BR:
acd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOLE_17995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ADI92483
UniProt:
D8JHT7
LinkDB
All DBs
Position
complement(3832307..3836500)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPIEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYFNALEEHGDE
FTAKMGAEAIQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFNDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGQVAIHARVKVRVHQTVINENGEREHGTIIVDTTPGRCLLWEVVPQGLSFDMINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKHTIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTAGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAHLEEAGVDEVKVRSVIACESAFGVC
ARCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGEAVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETVSDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHELHND
FSEVDQAFSQALNSEQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggactcagatggtcatgcaccaatt
gagtttgaccgtatccgtattggtcttgcgtcaccagaaatgattaagtcatggtctcat
ggtgaagttaaaaaacctgagacaattaactaccgtacttttaaaccagaacgtgacggt
ttgttctgtgccaaaatttttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaactacagcg
aaagttcgtcgtgaacgtatgggtcacattgaactcgcttctccagttgcacatatctgg
ttcttaaaatcgttaccatctcgtatcggtttattacttgatatgacgcttcgtgatatc
gaacgcgtattgtatttcgaatcatacgttgtaactgatcctggtatgactccgtttgaa
aagtatcaacttttaacagacgaagaatacttcaatgcacttgaagagcacggtgatgaa
ttcactgcgaaaatgggtgcagaagcgattcaggacttattaaaagatatcgatcttgaa
gctgaaatcgcacgtttacgtgaagaaattcctcagacaacttctgaaacgaagttgaaa
aaagcgtctaaacgcttgaaattgatggaagcattcaacgattcaaacaacaagccagaa
tggatggtgatgaatgtacttcctgtacttccacctgatttacgtccattagttccactt
gaaggtggtcgtttcgcgacttctgacttgaacgatttatatcgtcgtgtcattaaccgt
aacaaccgtttgaagcgtcttcttgatcttgcagcaccagacattatcgtacgtaacgaa
aaacgtatgttacaagagtctgtagatgcattgcttgataacggtcgtcgtggtcgtgca
attactggttctaacaaacgtccattaaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcagaacttacttggtaagcgtgttgactattctggtcgttcggtaatt
actgtaggtcctactttacgtcttcaccaatgcggtcttccgaagaaaatggcacttgaa
ttattcaagccatttatttttgcgaaactacaagcttcaggtcaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgcgagactccagaagtttgggacgttcttgcttctgta
attcgtcaacatccagtaatgttgaaccgtgcgccaacacttcaccgtttaggtcttcaa
gcatttgaacctattcttattgaaggtaaggcaatccgtcttcacccactcgtttgtgct
gcgtttaacgccgacttcgatggtgaccaaatggcggtacacgttccattgacacttgaa
gcgcagttagaagctcgtgcattgatgatgtcaacaaacaacatcttgtcaccagcgaat
ggtgagccgatcatcgttccttcccaggacgttgtcttgggtctttactacatcacgcgt
gatgcagtaaatgctaaaggcgaaggcatggtgtttgctgatactcacgaagtaaaccgt
gcacttgcaactggtcaggttgcgatccatgctcgtgttaaagtacgtgtgcatcaaact
gttatcaatgaaaatggtgaacgtgaacacggaactattattgttgatacgacaccaggc
cgttgtttgctttgggaagttgttccacaaggcttaagctttgacatgatcaaccttgag
atgactaaaaagaatatctcgaagttaatcaactcttgctaccgtaaacttggtttgaaa
gataccgttatctttgctgaccaattaatgtacttgggcttccgtcaagcgactcgttca
ggtgtatctgtaggtatggaagacatgttgattccacctactaagcacacaattattgat
aaagcagaaacagaagttcgtgaaatcgaacaacagttcgaacaaggtttcgtaactgct
ggtgagcgttataacaaagttgtcgatatctgggcgcgtacaaacgaccaagttgctaaa
gcgatgatggataacttgtcttatacacttgtgaaaaataaacaaggtgaagacgagaaa
caaaaatcattcaacagcatctatatgatgtctgactctggtgcccgtggtagtgcggca
cagattcgtcagcttgctggtatgcgtggcttgatggcaaaaccggatggttcgattatc
gaaacaccgattaaagcgaacttccgtgaaggtttaacagtacttcagtactttatttca
acacacggtgcgcgtaaaggtttggccgatacagcattgaaaactgcgaactctggttac
ttgactcgtcgtcttgtagacgtagcacaagatttggtaattactgagcctgactgtggt
acagctggtggtttggtaatgactccattcattcaaggtggtgatgtcattgagccatta
cgtgaccgcgtattaggtcgtgtaactgctgaagacgtacgtcgtgcatctgatgatgaa
gttgtattacctcgtggtacgttaattgacgaaaaaatcgcagctcatcttgaagaagcg
ggtgtggatgaagtcaaagtacgttcagtaattgcttgtgaatctgcttttggtgtatgt
gctagatgttatggccgtgaccttgcacgtggtcacttggttaacccaggtgaatcagtt
ggtgtaatggcagcacaatctattggtgaaccaggtacacagttaacgatgcgtacgttc
cacgttggtggtgctgcgagccgaacttctgctgcaaacagtgttcaagtacgtaataaa
ggtactgtacgtttccataacgtgaaaactgtacaacatgcaaaaggccacttggtttca
gtttcacgttcaggtgaaattggtattgccgatgacttaggtcgtgagcgcgagcgttat
aaacttccttacggtgcaagcatcttgttgaaagatggtgaagctgtagaagctggcggc
atcgtagcgacttgggatccgcatacacatccattagtaacagaagttgctggtaaagca
cgtttcagtcaaatcgctgatggtgtaactgcaacatcgaaaactgatgatgcaactggt
atgactactgttgaaatcttgcctgtaacagctcgtcctgcttctggtaaagatttacgt
cctgcaatcgtgttggatacaacagatggcggcgaacagttctacttcttgccacaaaac
acaatcgtaactgttcgcgatggcgaaacgattggtgtcggtgacgtaattggtcgtgta
ccacaagaaacatcacgtactcgtgatattaccggtggtcttccgcgtgtagctgactta
ttcgaagcacgtaaaccgaaagaacatgcaattcttgctgaagtttcaggtgttgtaagc
ttcggtaaagaaactaagggtaaaaaccgtttagtaattaccccagatgatggttctgag
atttacgaagaattgattccaaaatggcgtcaaatcaacgtgttcgaaggcgagcatgtg
aaccgtggtgaaacagtttctgatggtccacaaaacccgcacgacatcttacgtttgaaa
ggtgaagttgcattaactaactacatcgtgaacgaagttcaagacgtataccgtctccaa
ggtgtaaaaatcaacgacaaacatattgaagttatcgtacgtcaaatgttgcgtaaagtt
gatatcactgatggtggcgatacaagcttcatcaaaggcgagcaagtggattacatccgc
gttgttcaagagaaccaagctgtcttggctcagaacaagttccctgcgaagtttgaacgt
caattgatgggtattacgaaagcatcgctttctacagactcgttcatctctgctgcatcg
ttccaggaaacaactcgtgtgttaactgaagctgctgtaacaggtaaagaagatgattta
cgtggcttgaaagaaaacgttgtagtcggtcgcttgattccagctggtactggtcttgca
taccacttagaacgtcgtcgtcaagaagcagaagctgctgaacatgagcttcacaatgac
ttcagcgaagtagaccaagcatttagccaagcattaaactcagaacaattctaa
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