Acetobacter vaccinii: FLP30_05670
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Entry
FLP30_05670 CDS
T07989
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acek
Acetobacter vaccinii
Pathway
acek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLP30_05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acek03019
]
FLP30_05670
03009 Ribosome biogenesis [BR:
acek03009
]
FLP30_05670
Enzymes [BR:
acek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FLP30_05670
Messenger RNA biogenesis [BR:
acek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FLP30_05670
Ribosome biogenesis [BR:
acek03009
]
Prokaryotic type
rRNA helicases
FLP30_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEO17282
UniProt:
A0A5C1YR66
LinkDB
All DBs
Position
complement(1271239..1273008)
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AA seq
589 aa
AA seq
DB search
MPFQNAPAPLARALAARGFAAPTSVQAAVLADEAKGRDLLVSARTGSGKTVAFGLTLADL
LLNGGERCSFTTAPVALVVAPTRELALQVRSELDWLYAETGARTVSCVGGMEPRREARAL
SMGCHIVVGTPGRLCDHLKRGNLDLSQIKAVVLDEADEMLDLGFRDELETLLDATPKDRR
TLLFSATIAREIASLARRYQHDALRLDTSGGNTPHTDITYRAVLADQPDMAGAVVNVLRL
EEAQTAIVFCHTREAVRQLQGILTERGFSSVAISGDLGQNERSRAIDSLRHGQARVCVAT
DVAARGIDIPELGLVIHASLPSNPATLLHRSGRTGRAGRKGVCVLLVPPARRRVAERLFQ
AAKITAEWSGAPTRQAIAQADAERLLNAPVLAALPPEGEGASQELTERLLANHTPQQLAT
ALVGLWSASLPEPVDVRVINADAARSRPMRDGAPAPRERERDRDRGPAMDGSWFRLSVGR
ADRADPKWLVPMLCKLGGIRKQDIGVIRIAGDHTLVEIANDKAQRFAECASATDPDEISI
EPARAPQGGHSHGGGGAGGGAGRPANAERRPMKPRGGPSKAPSSRKRKG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcagaacgcccccgcccctcttgcacgcgcattggcagcgcgcggctttgcc
gcccccacctccgtgcaggctgccgtccttgctgacgaagccaagggccgggacctgctg
gtatccgccagaacagggtccggtaaaaccgttgccttcggcctgacactggccgacctg
ctgctgaacgggggggagcgctgctccttcaccaccgcgccggtcgcccttgttgtggcc
cccacgcgtgaactcgcccttcaggtccgcagcgaactggactggctgtacgccgaaaca
ggggcacgcactgtttcctgcgttggtggcatggagccccggcgcgaggctcgcgccctg
tccatgggctgccacattgttgtcggcacccccggccgcctgtgcgaccacctcaagcgt
ggcaacctcgacctgtcgcagatcaaggctgtggtgctggacgaagcggacgaaatgctt
gacctgggcttccgcgacgagctggaaaccctgctggacgccacccccaaggaccgccgc
acgctgctgttctcggccaccatcgcgcgggaaatcgcgtcgctggcacgccgttaccag
catgacgccctgcgcctggacaccagcggcggcaacaccccgcataccgacattacctac
cgcgccgttctggccgaccagcccgacatggccggggctgttgtcaacgtgctgcggctg
gaagaagcccagaccgccattgtgttctgccacacgcgtgaagccgtgcggcagttgcag
ggtatcctgaccgagcgcggcttttcctccgtcgccatttcgggcgacctggggcagaac
gagcgcagccgcgccattgacagcctgcgccacgggcaggcccgcgtgtgcgtagccacc
gacgttgcggcccgcgggattgatattcccgagcttgggcttgtcatccacgccagcctg
ccgtccaacccggctacactgctgcaccgttcgggccgtacgggccgtgcgggccgcaag
ggcgtgtgcgtgctgctggtgccgcccgcacgccgccgcgtggctgaacgcctgtttcag
gccgcaaaaatcactgcggaatggagcggtgcccccacccgccaggccattgcccaggcc
gatgccgaacgcctgctgaacgcccctgtgctggccgccctgcccccggaaggggaaggt
gcctcgcaggaactgacagagcgcctgctggccaaccacacgccgcagcagcttgccacg
gcccttgtcggcctgtggagcgccagcctgcctgagcctgtggatgtgcgcgtgattaac
gccgatgccgcccgcagccgccccatgcgcgatggcgctcccgccccgcgtgagcgtgaa
cgcgaccgggatcgtggccctgccatggacggtagctggttccgcctgtctgtcggccgc
gccgaccgggcagaccccaagtggctggtgcccatgctgtgcaagcttggcggtatccgc
aagcaggacatcggggttatccggattgcgggcgaccatacgctggtggaaattgccaac
gacaaggcccagcgctttgccgaatgcgcctctgccaccgacccggacgaaatcagcatc
gaacccgcccgcgccccccagggcggccacagccacggcggtggcggtgctggtggtggc
gctggccgcccggccaatgccgaacgccgccccatgaagccacgcggcgggccgagcaaa
gccccgtcatcgcgcaagcgcaaaggctga
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