Apis cerana (Asiatic honeybee): 107999333
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Entry
107999333 CDS
T07475
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107999333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acer03019
]
107999333
Messenger RNA biogenesis [BR:
acer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107999333
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107999333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
107999333
NCBI-ProteinID:
XP_016914569
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLNKKNFRDSCQEISVLVQWKGLEADRHLLRSLLSCIDFSTG
EPPESSAKDYFQVQLLKQECTNLLSKPSFISNLCFAIDHPFHQQKTLNPSPKFFLRLKKV
LGLTLVQEVAFAIALLHSENTEIRTLALEHIQKQLPELIKNYINSETSNRHHEEGLHDSL
PEVLHLILSQAFHSANQFGLLSEAKEKFLKNLRRDFPRELVPVVLAPLLYPDNGETPQTK
IELNMAVNQMDGNSLVELIMELGYGFTSSVEECRSALAGLGAREISPACAARVLAHMARS
CNNLDDAGGLQSFWSNSGATQDANKEKSNDSSAPSTWNIEVFVQALKEIQSTLSWNEVIV
KLDHAEFIIKDRQGLNLLITGLRLGLQHQGYPPDMFPVELFYRHWDNVEGQFSLVQQILK
CPDIFCFADYPYHSVTVDVLKAAPESDSKEAQTWRSLNVVELLLHMAERGLYGPVQEIFK
WPIQHCPDVLVLALLQINAPITLLRQELLSTLMPIFLGNHPNSAVILHHAWHGNTVKIKS
IIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALTHLLTAQSYPFVIDLACLASRREYLKL
EKWLTDKIREQGEVFVTACVKFLQRRCPQVMGPGIKEDLTVPKASQLPQETLTTMLACLQ
VCAGSVSQECSEAIMTMVQNCSLMLSKSTMSRPPPPGVLRHRGLEPFNPATLGGQLFSSK
QVDPLGNLSSSLASMGLSSSLGPPSSSAFNLPGALGPLVSAPGSPSRLMGPSPSPFPMLP
LSSQLHSGPVGTQGPSVLPGSTTIGGLGRLGPPTGIEKARIPETSNLFPDMAQNVSKEIE
DEANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSGSKREREVFNCMLRNLFEEYRFFPQY
PDKELQITAQLFGGIIERGLINSYMTLGLALRFVLDALRKPEGSKMYYFGITALDRFKSR
LKDYQTYCEHVRAIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTLAAMLAPVTTP
YKTITTTTITTSTTQAKSSTTPTTSLSARPSIANATNIDTLLVATDKEEKITTPPEALQD
KTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLK
SPEVYKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILHIDIDL
KSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVGELKPALYLKDPEKLRNLEYQLSHPNKKSESNNNQQQSQGPIE
ELVGPTTTGTIVPQTAPANTTPSLPTGPPEPRFNYMDISVTGIANISQHITINNNLPLFQ
THPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARHM
VRNLTAGMAMITCRDQVLASISTNLKQAFLTAMMGTTPQQKELAEQAANVVAADNMELAC
AFVQKTAIEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGVT
PQQMAVYEEFARNIPGFLPLSERDTQALLMPKPVTEPAVTAFAANPAVAVATAQQVAAYA
AAVSNDEVGAMLEKLATEVEVLLAAMGPAAPPPQHAALHSLLESIILTRRSRDAGAAMAL
LKKAVEGLLDGPTISSGVIDSEIILRYRELHLRILKCLQDPRAYGMQWTNKHVTRCLTEC
REEFRYNFEAVDYLIRSHLISLPQYDLALAQAIDSGNAMATAFAMQLMQLYLIDERQTTH
VTESDLCNTIEILARIAHHRAPPEGILLFRLTSLMESLRANHDPAVLADRAPAGPTAHIH
SGILQVRARDFDDPPGLMEKTEYLLREWVSMHHNPTHARDPTKAFGMFVHQMNIHGILKT
DDLITRFFKLSTQMCVDLCYRALAETNAAPSVVRAKCFHSLDAFVRLVALLVKHSGDSTN
THTKINLLNKVLGIVAGVLLQDHEIRGTDFHQLPYHRIFIMLFLELCAPEPVLEAVNYQV
LTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYL
APYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMKNLILSA
YPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTFLS
ELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAFIRSKGHTPNMSTIAHSAHMDIFQNL
AVDLDTEGRYLFVNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIV
NRPHPWGLLITFVELIKNPTYKFWTHEFVHCAPEIEKLFESIARSCMVQKQVQPTPEPEI
PE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaattta
aataagaaaaattttcgggacagctgccaagaaatatcagttctggtgcagtggaagggt
ttggaggcagacagacatttgctgcgctctttactctcgtgcatcgacttttcaacagga
gaacctccagaatcaagtgcaaaagattattttcaagtgcaacttctaaaacaagagtgt
actaatcttcttagcaaaccttcttttatttctaatctgtgctttgctatagatcatcca
tttcatcaacaaaagactttgaatccatcaccaaagttttttttacgtttaaaaaaggta
cttggcttaactctagtacaagaagttgcatttgcaattgcattactgcattctgagaat
actgaaattcgtacattagctttagaacacatacaaaaacagctgcctgaattgataaaa
aattacattaattctgagacaagcaatagacatcacgaagagggattgcacgattcattg
cctgaagttcttcatcttatattatctcaggcttttcattcagccaatcaatttggcctt
ttatctgaagcaaaagaaaaatttctcaagaatttaaggcgcgattttccccgtgaactg
gtaccagtggtgctagcaccactcttgtacccagataacggggaaactccgcaaaccaaa
atcgaactaaacatggctgttaaccaaatggatgggaattctctagtagaattgattatg
gaattaggatatggatttactagtagtgttgaagaatgtcgttcagctttagctggctta
ggagctcgagaaatttctccagcatgtgcagctagagttttagctcatatggcacgtagc
tgtaataatcttgatgatgctggaggattacaatcattttggagtaattctggagctaca
caagatgcaaataaggagaaatcaaatgatagttctgctccttctacatggaatattgaa
gtttttgttcaagcattaaaagaaattcaatcaacattgtcctggaatgaagtaatagtt
aaattagatcatgcagaattcattattaaagatagacaaggattgaatttgttaatcaca
ggattaaggttgggcttgcaacatcaaggatatcctccagatatgtttcctgtggaactt
ttttatcgtcattgggacaatgtagaaggacagttttctctagtacaacaaattttaaag
tgccctgatatattttgctttgctgattatccatatcattctgtaactgttgatgtatta
aaagcggcgccagaaagtgatagtaaagaagcacaaacttggagatctttaaatgtagtt
gaattactcttgcatatggcagaaagaggattatatggaccagttcaagaaatatttaag
tggcccattcaacactgccctgatgttcttgtattggcattattacagatcaatgctcct
attactttactcagacaagaattacttagtacattgatgcctatttttctgggaaatcat
ccaaactcagctgttattctacatcatgcgtggcatggaaacacagttaaaataaaatct
attattatgcatgctatggcggaatggtatatacgtggagatcatgatcaaacaagatta
tctcgtattcttgatgttgctcaagatcttaaagcattaactcatttattgactgctcaa
tcatatccatttgttattgacttagcttgtttagcttcaagaagagaatatttaaaatta
gaaaaatggttgacagataaaattagagaacaaggagaagtatttgttactgcgtgtgta
aagtttttacaaagacgttgtcctcaagtaatgggacctggtataaaagaagatcttacc
gtaccaaaagcaagtcaacttcctcaagaaacattaacaacaatgcttgcttgcttgcaa
gtgtgtgctggtagtgtatctcaagaatgttcagaggcaataatgacaatggtacaaaat
tgtagtctaatgttgagtaaaagtacaatgagtagacctcctccgccaggagttttacga
catcgtggattggaaccttttaatccagcaactttgggaggacagttgttttcttcaaaa
caagtggatccgcttggaaatttaagttcaagtcttgcatctatgggtttgagttccagt
cttggtccaccaagtagttctgcatttaatttaccaggtgctcttggacctttagtatca
gcacctggttctccttcccgtctcatgggaccttctccaagtccatttccgatgttgcca
ttatcttcacaattacattcaggaccagttggtacacaaggaccatctgtcttacctggt
agtacaacgattggaggattaggacgacttggaccaccaacaggcattgaaaaagcaaga
atacctgaaacatcaaacttatttcctgatatggcacaaaatgtttccaaagaaattgaa
gatgaagcaaatagttactttcagcgaatatacaatcatccaccacatcctactttatca
attgatgaagttcttgatatgttaaaaaaatttcaagattctggtagtaaaagagagaga
gaagtattcaattgtatgttaagaaatttatttgaggaataccgattttttcctcaatac
ccagataaagagttacaaattacggcacaactgtttggaggaattatcgaaagagggttg
attaatagctatatgacacttggattagctttgagatttgtgttggatgcacttaggaaa
ccagaaggcagcaagatgtattactttggcataacagctctggatcgtttcaagagccgt
ttaaaagactaccaaacatactgtgagcatgtcagggcaattcaacatttcagtgagttc
ccaccacatttaattgagtatatagaatatggattacaggggcaggagcctcccacgaga
cctcaaggtccagttctcccaaaaactttagcagctatgttggcaccagttactacgcca
tataaaactattacgacaacaacaataacaacaagtactactcaagcgaaatcgtctacg
actccaaccacttctctctcagctagaccttccattgctaatgcaacaaatattgataca
ttattagtagcaacagataaagaagaaaagattacgacaccaccagaagctttacaagat
aaaacagcatttatttttaataaccttagtcaactcaatttacaacaaaaatgtgatgaa
attcgggaaattgttacagaagagtattggccttggatggctcaatatttagtaatgaaa
cgtgcaagcatagaattaaatttccatgctttatattcaaattttttagattgtttgaaa
tcgccagaagtgtataaaatggttactagagaaacatttagaaacataaaagttttattg
cgaagtgataaaggaatagcaaatttttctgatcgttcacttttaaaaaatttaggtcat
tggttgggaatgttaacccttggcagaaataaacccattttacatattgatatagattta
aagagtttacttgttgaagcatatcataaaggtcaacaagaacttctttatgttgttccc
ttcgttgctaaagtactagaaagttgtgcaaaaagtcgtgtttttcgtccgcctaatcct
tggacaatggcaattatgaatgttttagcagaattgcatcaagaacctgatttaaaactt
aatttaaaatttgaaatcgaagtattatgtaaaaatttaagtattgatgttggtgaatta
aaacctgcactttatttaaaagatccagaaaaattacgaaatttagaatatcaattatca
catcctaataaaaaatctgaatcaaataataatcaacaacaatctcaaggtcctattgaa
gaattagttggacctactacaactgggactattgttccacaaacagctccagcaaataca
acaccatctttacctactggtccaccagaaccacgttttaattatatggatatatctgta
acgggcattgccaatatttctcagcatatcactattaataacaatttgccattatttcaa
acacatccacatttaaaacaatttgttcgtccagctgttgaaagagcaattcaagaatgg
attcatcctgtagtggatagatcaatcaaaatagctttaactactagtgaacagattgtg
agaaaagattttgcattagatccagaagaagttcgtatgagaacagcagcaagacatatg
gttcgtaatttaactgctggaatggctatgatcacttgccgtgatcaagttttggcgtca
attagtacaaatctgaaacaagcttttttaactgcaatgatgggcacaactccacaacaa
aaagaacttgcagaacaagcagctaatgtagtagctgctgacaatatggaacttgcttgc
gcatttgtacaaaaaacagctattgaaaaagcaattccagaaatggataaacgtttatta
aatgaaattgaattacgaaaaattgcacggcaagaaggaagaagatattgcgatccatta
gctaaatatcaggctgaaagaatgcctgaacaaataagattaaaagttggcggagtaact
cctcaacaaatggctgtttatgaagaatttgcaagaaatattccaggatttttaccatta
tctgaacgagatacacaagctttactaatgccaaaacctgttacagaacctgctgtaact
gcatttgctgctaatccagccgttgcagtagcaacagcgcaacaggtcgctgcatatgca
gcagcagtgagtaatgatgaagttggagccatgttagaaaaacttgcaactgaagttgaa
gtattgcttgctgcaatgggtccagctgcacctcctccacaacatgctgctcttcatagt
ctcttagaatcgattatcctaacacgaaggtcaagagatgcaggtgctgctatggcatta
cttaaaaaggctgtagaaggattattagatggccctaccatttccagcggtgtaatagat
tcggaaattatattacgatatagagaacttcatttacgcattttaaaatgtcttcaagat
ccacgtgcttatggtatgcaatggacaaacaaacatgttactcgatgtttaacagaatgc
agagaagaatttcgatacaattttgaagctgtcgattatcttattagatctcatttaatt
agtcttccacaatatgatttagctttggctcaagctatagattctggaaatgctatggca
acagcatttgcaatgcaattgatgcaactttatttaattgatgaaagacaaactacacat
gttactgaatctgatttatgtaatacaattgagatacttgcaagaatagctcatcataga
gcaccacctgaagggattttactatttagactgacaagtttaatggaatcattgcgtgct
aatcatgatccagcagtattagcagatagagcccctgctggtcctacagcacatattcat
tctggaattctacaggtgagagctcgtgattttgatgatccacctgggttgatggagaaa
acagaatatttattacgcgaatgggtttcaatgcatcataacccaacacacgctcgtgat
cctacaaaagctttcggaatgtttgttcatcaaatgaacattcatggaattcttaaaact
gatgatctcataacaagattctttaaattaagcactcaaatgtgcgttgatctgtgttat
cgtgctttagctgagacaaatgctgcaccatcagttgttcgtgcaaaatgtttccattcg
ttggatgcatttgttcgtttagttgcgcttttggtaaaacattctggtgatagtacaaat
actcacacaaaaattaatttactaaacaaggttttgggaattgtggctggtgtattacta
caggatcatgaaatacgaggaaccgattttcatcaattgccctatcatagaattttcatt
atgcttttcctggagctttgtgctcctgaacctgtattagaagcagtaaattatcaagta
ttaactgctttttgccatacgctacatatacttagaccagccaaagcttcgggattttgt
tacgcttggctagaattagtttcacacagagtttttattgggcgtatgcttgcgattaca
ccgcaacaaaaatgttggggcatgtatgcgcaacttttaattgatctatttaagtatctt
gcaccataccttcgaaatgctgaacttgcaaaacctgttactttgttatacaaaggaact
cttagagtactattagttttattacacgattttcctgaatttctttgtgattatcattat
ggattttgtgatgtaattccacctaattgcatacaaatgaaaaatcttattttaagtgca
tatccaagaaatatgcgattacctgacccatttacaccaaacttaaaagttgatatgcta
caagagatagctcatgctcctcgagtattaaccaattttgcgtctatgatacaaccatta
agtttcaaaaaagaacttgattcgtatttaaaagcgcgagctccagttacttttctttct
gaattgcgcagtaatttacaagtatctcaagaagctggtgttcgctataatattcagtta
atgaatgctctagtactttatgttggaacacaagctatagcttttattcgcagcaaagga
catactcctaatatgtctactattgcacattctgcacatatggatatatttcaaaactta
gcagtcgatctcgatacagaaggtcgttatttattcgtaaatgcaattgcaaatcaattg
cgatatcctaacagtcacacgcattacttcagttgcactcttctatacttgtttgctgaa
gctaatacagaagcgatacaagaacaaattacgagagttcttcttgagagacttattgta
aatagacctcatccatggggtcttctcattacttttgttgaacttattaaaaatccaaca
tataaattctggacgcatgaatttgttcactgtgcaccagaaatcgaaaaattattcgag
tcgatagctcgatcgtgtatggttcaaaaacaagtacagcccactccagaaccggagatt
ccagagtga
DBGET
integrated database retrieval system
