Achromobacter sp. ES-001: KYT87_01195
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Entry
KYT87_01195 CDS
T10529
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
acha Achromobacter sp. ES-001
Pathway
acha00040
Pentose and glucuronate interconversions
acha01100
Metabolic pathways
acha02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KYT87_01195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KYT87_01195
Enzymes [BR:
acha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KYT87_01195
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
RANK_CRD_2
Motif
Other DBs
NCBI-ProteinID:
QYJ24381
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Position
253656..254864
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AA seq
402 aa
AA seq
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MKSAMKTMRWLLAVALLQGGVAAANEACPSPDEHCPLVSSLLSQREGYGAKATGGLGGKF
IEVTSDQDSGPGTLRAALAQAKKGPTWIRFASDMTIVLDKQLRVPSNVTIDGRGKRVALI
DDGLGVYGVQNVILTHLTIDGRLNRLTQAVNVANGSRDVWVDHMDLSRMSDRLLNVKNGS
TDVTISWTKFHNSNKVMLLNNITSKNLFQNYERDSIARVTLHHNYFFNTVQRNPRGQFGT
FHLFNNLLEDWDFYGMSFSLEAKALVEGNIFNNTAQRKCVEPEFFPTVEGVNVNYCHYIP
IAAKRSALDNGESDRGAYEKLKSQHGYTRDYKAFLRLKDNLYLGDAKPVLQDYRPDAAPT
PPYCYGYEHPTPELADKIRKFAGNTGGDTPLPASRTGSGCGG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgcaatgaaaacgatgcgttggctgcttgccgtggccctgctgcaaggcggg
gtggcggccgcgaatgaagcctgccccagcccggacgaacactgcccgctcgtttcatcg
ctgctgtctcaacgcgaaggctacggcgccaaggccacgggcggcctgggcggcaagttc
atcgaggtgacgtccgaccaggattcggggccgggcaccttgcgcgccgcgctggcgcaa
gccaagaagggtccgacctggatccgcttcgcatccgatatgacgatcgtgctggacaag
cagctgcgcgtgccctcgaacgtgacgatcgacgggcgcggcaagcgcgttgccttgatc
gacgacgggctgggcgtgtacggcgtgcagaacgtcatcctgacgcacctgaccatcgac
ggccgcctgaaccggctgacgcaggccgtgaacgtggccaatggcagccgcgatgtgtgg
gtggaccatatggatctgtcgcgcatgtcggaccggctgctgaacgtgaagaacgggtcc
accgacgtgacaatttcatggaccaagttccataactcgaacaaggtcatgctgctgaac
aacatcacgtccaagaatctgttccagaactacgaacgtgattcgatcgcccgcgtgacg
ctgcatcacaactatttcttcaacaccgtgcagcgcaatccgcgcgggcagttcggcacg
ttccacctgttcaacaacctgcttgaagactgggatttctacggcatgagcttcagcctg
gaagccaaggcgctggtcgaaggcaacatcttcaacaacacggcgcagcgcaagtgcgtc
gagcccgaattctttcccacggtggaaggcgtcaacgtcaattactgccactacattccc
attgccgccaaacgcagcgcgctggacaacggcgagtcggatcgcggcgcgtacgagaaa
ttgaagtcgcagcacggctacacgcgcgactacaaagccttcctgcgcctgaaagacaac
ctgtacctgggcgatgccaagccggtgttgcaggactaccgacccgatgccgccccgacg
ccgccgtattgttacggctacgagcacccgacgccggaattggccgacaagatccgcaag
tttgccggcaacaccggtggcgatacgcccctgcctgcatcaagaaccgggtctggctgc
ggcggctag
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