Achromobacter sp. AONIH1: C2U31_11630
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Entry
C2U31_11630 CDS
T05288
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
achr
Achromobacter sp. AONIH1
Pathway
achr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U31_11630 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achr03019
]
C2U31_11630 (pnp)
03016 Transfer RNA biogenesis [BR:
achr03016
]
C2U31_11630 (pnp)
Enzymes [BR:
achr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C2U31_11630 (pnp)
Messenger RNA biogenesis [BR:
achr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C2U31_11630 (pnp)
Transfer RNA biogenesis [BR:
achr03016
]
Prokaryotic type
tRNA degradation factors
C2U31_11630 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KhpA-B_KH
SLS1_KH2
DUF5813
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AUT46579
UniProt:
A0A2I8DH99
LinkDB
All DBs
Position
2539121..2541277
Genome browser
AA seq
718 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYAINPTASQLKSSKLDLVVA
GTENAVLMVESEADQLSEEVMLGGVVYGHQQMQAVINAIHDLVKDAGKPEWDWQAPAKDE
ALIAAVTAAAQPGLNAAYQVREKQARTTQLREVYANVSATLNAAAAEKGEPAPDAVTVDN
ILFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMMHYNMPPFATGETGRIGVPKRREIGHGRLAKRALIPLL
PAPEDFQYTIRLVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQVYEGAVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQQAAAEAAPQAEAQPE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgactaaatcgttccagtacggccagcacacggtcgtcctggaaacc
ggcgagatcgctcgccaggcctccggcgccgtcgtggtgtcgatcgaggacaccgtggtc
ctggcgaccgtcgtggcctccaagaaggccaagccgggtcagaccttcttcccgctgacc
gtcgactacatcgagaaaacctacgccgccggccgcatcccgggcggcttcttcaagcgc
gaaggcaagccgtccgaaaaggaaacgctgacctcccgcctgatcgaccgtcccctgcgt
ccgctgttccccgaagacttctacaacgaagtccaggtggtcatccacacgctgtcggtc
aaccctgaaatcgaccccgacatcgccgccatgatcggcgcctcggccgcgctggccatc
tcgggcatcccgttcaacggcccgatcggcgccgcgcgcgtgggctacatcgatggccag
tacgccatcaacccgaccgcctcgcagctgaagtcctccaagctggacctggtggtcgcc
ggcaccgagaacgccgtgctgatggtggaatcggaagccgaccagctgtccgaggaagtc
atgctcggcggcgtggtctacggccaccagcagatgcaggccgtcatcaacgccatccat
gacctggtcaaggacgccggcaagcccgagtgggactggcaggctccggcgaaggacgag
gccctgatcgccgccgtcaccgccgccgcccagcccggcctgaacgccgcctaccaggtc
cgcgaaaagcaggcccgcacgacgcagctgcgcgaagtctacgccaacgtgtcggccacg
ctgaacgccgccgccgccgagaagggcgagccggcgcctgacgccgtcaccgtcgacaac
atcctgttctcgctggaatccgccatcgtgcgcggccagatcctgaacggcgagccgcgc
atcgacggccgcgacacccgcaccgtgcgcccgatcagcgtgcgcctgggcgtgctgccg
cgcgctcacggcagcgccctgttcacccgcggcgaaacccaggcgctggtcgtggccacg
ctgggcaccaagcaggacgagcagatcatcgacgcgctcatgggcgagtaccgcgaccgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaaccggtcgcatcggcgtg
cccaagcgccgcgaaatcggccacggccgcctggccaagcgcgcgctgatcccgctgctg
ccggccccggaagacttccagtacaccatccgcctcgtctcggaaatcaccgagtccaac
ggctcctcgtcgatggcttcggtctgcggcggttcgctggccatgatggacgccggcgtg
ccggtcaaggaccacgtcgccggcgtggcgatgggcctgatcctggacggcggcaagttc
gccgtgctgaccgacatcctgggcgatgaagatcatctgggcgacatggacttcaaggtc
gcgggcaccgagaacggcgtcacggccctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggtggcgctggcccaggcccgcgaaggccgcctgcacatcctgggc
aagatgaaggaagcgctggacggttcgcgcggcgagctgtcggctttcgctccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagagaccggcacgcagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaggaagcccagcgccgcatcgtcgagctg
accgccgacgtggaagtgggccaggtctatgaaggcgccgtgctgcgcctgctggacttc
ggcgccatcgtccaggtgctgccgggccgcgacggcctgctgcacatctcggagatcgcc
aactaccgcatcgccaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggccatcggtggcatc
gagcagcagcaggccgctgccgaagccgctccgcaagccgaggcgcagcccgaataa
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