KEGG   Acidiferrobacter sp. SPIII_3: C4901_16415
Entry
C4901_16415       CDS       T05469                                 
Name
(GenBank) ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
acii  Acidiferrobacter sp. SPIII_3
Pathway
acii00230  Purine metabolism
acii00240  Pyrimidine metabolism
acii01100  Metabolic pathways
acii01232  Nucleotide metabolism
Module
acii_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
acii_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:acii00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    C4901_16415
   00240 Pyrimidine metabolism
    C4901_16415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acii03400]
    C4901_16415
Enzymes [BR:acii01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     C4901_16415
DNA repair and recombination proteins [BR:acii03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    C4901_16415
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN Intein_splicing LAGLIDADG_3
Other DBs
NCBI-ProteinID: AWP24712
LinkDB
Position
3243432..3247160
AA seq 1242 aa
MDYAQSSQASPGAAVVENGLRVIRRNGHATRFDPSKIAIAITKAFLATEGNSGAASTRVR
EIVAGLTDQVIAALTRRLPGGGTVHIEDIQDQVELALMRNGHHETARRYVLYREQRAQAR
ASAQAAAQEPEIHVRTADGRSVPLDRARLKAVIDEACSGLREVSADGVLQALLRNLFDGV
DERDVMQSAILSARALVETEPNYTYVSARLLLDVLRREVLGRSVTHGEMRGEYAEYFQAF
IREGVEAELIDPRLTEFDGARLGQALKADRDLNFTYLGLQTLYDRYFLHREERRIELPQA
FWMRVAMGLALNEVDRETRAIEFYEALSTFDFVSSTPTLFNAGTLRSQLSSCYLTTVSDD
LDGIYSAIKDNALLSKYAGGLGNDWSRVRALGARIKGTNGKSQGVIPFLKVANDTAVAVN
QGGRRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVRAGAEW
TLFSPSDTADLHDVYGEAFRAAYERHEEQVARGELKLFKKVRALDLWRKMLSMLFETGHP
WLTFKDPCNLRSPQRHRGVVHSSNLCCMTADQRVVTDRGLLTVGELYALGGKNRVVGLDG
VYDASEMLRPRPNAPIVRIETAEGYRHKVTPDHKVWVKDRGWVEARHLKPGDRLLVQQRE
GLFGPMHNPEIAFVIGLMTASSAYGRHRMVTELEATRFAYIGKARMAVISHETGETHESW
HETHDERDHTHVGIPELIWKGDKETVTAYLRGLYQAGNGMIKSLTLASYDQPFIESLQIV
WANLGVETHIQQIDKAYWRHSLFRLIMSSSEGHAIAASVLQVGEEDFPLNHGDSPHVSDK
QRGYATFTGLTPLPKEDAYCLMVDSPTHAWTVNGLITKNTEITLNTSDQEIAVCNLGSVN
LAAHVGDEGGMDMAKLGRTVRTAMRMLDNVIDVNYYSVPQARASNLRHRPVGLGLMGFQD
ALYKLRLPYGSDEAMTFADRSMEAVSFYAILASSELAKERGTYASYEGSLWSQGILPIDS
IAFVEEARGGSLSMDRGVALDWTPVRETIAQHGMRNSNCLAIAPTATISNIAGVAQSIEP
TYQNLFVKSNLSGEFTVLNEHLVRDLKERGLWDPVMVNDLKYYNGRVRGIDRLPDDLKAL
YATAFEIEPRWLIEAASRRQKWIDQAQSLNLYMAEPSGRKLSDMYMLAWEKGLKTTYYLR
TLGATSVEKSTLNDGALNAVRGAVPEAPKACAINDPQCEACQ
NT seq 3729 nt   +upstreamnt  +downstreamnt
atggattacgcgcaatcgtcacaggcttccccaggcgcggcggtcgtcgaaaacggccta
cgcgtcattcgccgcaacgggcatgccacgcgatttgacccctccaagatcgcgatcgcc
atcaccaaggcctttttggcgaccgagggcaactcaggggcggcctcgacgcgcgtgcgc
gagatcgtggcgggactcacagaccaagtcatcgcggcgctgacccgtcggctccccggc
ggcggcaccgtccatatcgaggacatccaggatcaggtcgagcttgcgctcatgcgcaac
ggccaccacgagaccgcccggcgctacgtcctctaccgcgaacagcgcgcccaggcgcgc
gccagcgcccaagccgcggcccaggaacccgagattcatgtccgcaccgccgatggacgc
agcgtgccgctcgaccgggcccgactcaaggccgtaatcgatgaggcctgcagcggcctg
cgtgaggtctcggccgacggcgtgctccaggccctgctccgcaacctgttcgacggggtc
gacgaacgcgacgtcatgcagtcggcgatcctgagcgcccgcgcgctggtggagacggaa
ccgaactacacctatgtgagcgcgcgcctgctgcttgatgtattgcgacgcgaggtgctc
ggccggtcggtgacccatggcgagatgcgcggtgaatatgcggaatactttcaggccttc
atccgcgaaggggtggaggcggagctcatcgacccacggctgaccgaattcgacggcgcg
cgcctcggacaggcactgaaggccgaccgcgacctgaatttcacctatctcggcctccag
acgctgtatgaccgctacttcctacaccgcgaagagcggcgcatcgaactaccccaggcg
ttttggatgcgcgtagccatggggcttgccttgaacgaggtggaccgggagacacgcgcc
attgaattctatgaggcgctgtcgaccttcgacttcgtgtcgtcgaccccgaccctgttc
aatgccggcacgctgcgttcgcagctgtcatcgtgctacttgacgacggtctcggacgac
ctggatggcatctacagcgccatcaaggacaacgcgctgctatcgaaatacgcgggcggc
cttggcaacgactggtcgcgcgtgcgcgccctgggggcgcgcatcaagggcaccaacggc
aaatcacagggggtaatcccgttcctcaaggtcgccaacgataccgccgtggcggtcaat
cagggggggcggcgcaagggtgcggtctgcgcctatctcgagacctggcatctggacatc
gaggaattcctcgagctgcgcaagaacaccggcgatgacagacggcgcacccacgacatg
aacaccgcaaactggataccggacctgttcatggagcgggtgcgcgcgggcgccgaatgg
acgctgttttcaccatcggacaccgcggacctgcacgatgtctacggtgaggcgttccgg
gcggcctatgaacgccacgaggagcaggtggcgcgcggcgaactgaagctcttcaagaag
gtccgggcgctggatctgtggcgcaagatgctgtcgatgctgtttgagaccggccacccg
tggcttaccttcaaagacccctgcaatctgcgcagtcctcagcgccacaggggcgtggtc
cacagctccaatctatgctgcatgaccgccgaccagcgggtggtgacggatcgcggattg
ctgaccgtgggcgagctttatgccctgggcggcaagaaccgggtcgtcgggcttgacggt
gtctacgacgcatcggagatgttgcggccacgacccaacgccccgatcgtccgtatagaa
accgcggaaggctaccgccacaaggtcacaccggaccacaaggtgtgggtgaaggaccgc
ggctgggtcgaggcgcggcacttgaagcccggggaccgtctgctcgttcagcaacgcgaa
gggctgttcgggcccatgcataaccccgagatcgccttcgtgatagggctcatgaccgcg
agcagcgcctacgggcggcatcgcatggtgaccgaactcgaggcgacacgctttgcctat
atcggcaaggcgcgcatggcggtgatctcgcacgagaccggggagacccatgagtcctgg
cacgagacccacgacgagcgcgatcatacccacgtcggcatcccggagctcatctggaag
ggcgacaaggagacggtgacagcctacctgcgcggcctctatcaggccgggaacgggatg
atcaagagcctcaccctcgcctcctacgaccagccgttcatcgaaagcctgcagatcgtg
tgggccaatctcggcgtcgagacgcatatccagcagatcgacaaggcctactggcggcat
tcgctcttccgtctgatcatgagcagcagcgagggccatgcgatagccgcgtccgtgctg
caggtgggcgaggaagacttcccgttgaaccacggcgacagcccgcatgtgagcgacaag
cagcgcggctatgcgacattcaccgggctcacgccgctccccaaagaggatgcctactgc
ctcatggtggactcgccgacccatgcgtggaccgtcaacggcctgatcaccaagaacacc
gagatcacgctcaatacctccgatcaggagatcgcggtctgcaacctgggctccgtgaac
ctcgccgcccacgtcggcgatgagggcggcatggacatggcgaaactcgggcgcacggtg
cgcaccgcgatgcgcatgctcgacaacgtcatcgacgtcaactattactccgtgccccag
gcacgcgcctccaacctgcgccatcggccggtcggcctcgggctcatgggcttccaggac
gcgctctacaagctgcgcctgccatatggctcggacgaggcgatgaccttcgccgaccga
tccatggaggcggtcagcttctatgcgatcctcgcctcaagcgagcttgccaaggaacgt
ggcacctatgcgagctatgaggggtcgctctggagccaggggatcctacccatagacagc
attgccttcgtggaggaggcacgcggcgggtcgctgtccatggaccggggcgtcgcgctt
gattggacgccggtgcgcgagaccatagcgcagcatgggatgcgcaactcgaactgtctg
gcgatagcaccgaccgccacgatctcgaatatcgccggggtcgcgcaaagcatagaaccg
acctaccagaacctgttcgtgaagtcgaacctgtccggcgagttcacggtcctgaacgaa
cacctggttcgcgacctgaaagagcgcggcctgtgggacccggtgatggtcaatgacctc
aagtattacaacgggcgcgtgcgcggcatagaccgcctgccagacgacctcaaggccctg
tacgccaccgccttcgagatcgaaccgcgctggctcatcgaggccgcatcgcgccgccag
aagtggatcgatcaggcgcagagtctgaacctctacatggcggaaccctcggggcggaag
ctgtccgatatgtatatgttggcgtgggaaaaggggctgaagactacctattacctacgc
accctgggcgccacctcggtggagaagtcgacgctaaacgatggggccctgaacgcggta
cgcggtgcggtgcccgaggcccccaaggcctgcgccatcaatgacccgcagtgcgaggca
tgccaataa

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