Acidovorax carolinensis P4: CBP36_00015
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Entry
CBP36_00015 CDS
T04962
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acip
Acidovorax carolinensis P4
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acip03032
]
CBP36_00015
03400 DNA repair and recombination proteins [BR:
acip03400
]
CBP36_00015
Enzymes [BR:
acip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CBP36_00015
DNA replication proteins [BR:
acip03032
]
Prokaryotic type
DNA Topoisomerases
CBP36_00015
DNA repair and recombination proteins [BR:
acip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBP36_00015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ART57464
UniProt:
A0A240U7K3
LinkDB
All DBs
Position
2793..5408
Genome browser
AA seq
871 aa
AA seq
DB search
MTADNTQPEPTENGSTGNGEPVVQKIDTNQAGASESYGEGSITILEGLEAVRKRPGMYIG
DTSDGTGLHHLVFEVVDNSIDEALAGHCDDIVVTIHSDNSISVTDNGRGIPTGVKMDDKH
EPKRSASEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKKLRLTVRREGKVHVLE
FSRGFVQNRIIETVDGVEVSPMKITGETDKRGTEVHFLPDTEIFKENNDFHYEILAKRLR
ELSFLNNGVRIRLKDERSGKEDDFSGAGGVRGFVEFINKGKTVLHPTSFYAAGERPAETY
GGIPGTHIGVEVAMQWNSGYTEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEENDF
AKKAKVEVTGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVGKLLTDYLQ
ERPADAKIICGKIVEAARAREAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALCEIYI
VEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGKAG
GSTGNDDFDVSKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLY
KVKAGKEELYLKDAPALDGFLLRIALNHASVFTGNAGEQTLSGDTLAELARKHQIAESVI
ARLGNFMDAEALRSIADGVSLKLDTVAEAEASAVQLQAKLRELNTTGAPAEVAGEFDVRT
DKPLLRISRRHHGNIKSSVITQDFVHGADYAALAEAAETFRGLLGEGAKVMRGEGEKRKE
EKVGDFRQAMKWLISEAERSTSRQRYKGLGEMNPEQLWETTMDPNVRRLLRVQIDDAIEA
DRVFTMLMGDEVEPRRDFIETNALRAGNIDV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgacaacacccaacccgagcccaccgagaacggctccaccggcaatggtgag
cccgttgtgcaaaagatcgacaccaaccaggccggtgccagcgaaagctacggcgaaggc
tccatcaccatcctggaagggctggaggccgtgcgcaagcgccccggcatgtacatcggc
gacacgagcgatggcacgggcctgcaccatctggtgttcgaggtggtggacaactccatc
gacgaagccctggccggccactgcgatgacatcgtggtcaccatccacagcgacaactcc
atcagcgtgaccgacaacggccgcggcattcccaccggcgtgaagatggacgacaagcac
gagcccaagcgcagtgcgtcggaaattgcgttgaccgagctgcacgccggcggtaagttc
aaccagaacagctacaaggtctcgggcggcctgcacggcgtgggcgtcagctgcgtgaac
gcactgtcgaagaagctgcgcctgacggtgcgccgcgaaggcaaggtgcatgtcctcgag
ttcagccgcggcttcgtgcaaaaccgcatcatcgaaacggtggacggcgttgaagtttcg
cccatgaagatcaccggcgagacggacaagcgcggcaccgaggtgcactttctgcccgac
accgaaatcttcaaggaaaacaacgatttccactacgaaatcctggccaagcgcctgcgc
gaactctctttcttgaacaacggcgtgcgcattcgtctgaaagacgagcgcagcggcaag
gaagacgacttctcgggcgccggtggcgtgcgcggctttgtcgagttcatcaacaagggc
aagaccgttctgcaccccacctcgttctacgcggcgggcgagcgtccggccgaaacctat
ggcggcatccccggcacgcacatcggcgtggaagtggccatgcagtggaacagcggctac
accgagcaggtgctgtgcttcaccaacaacattccgcagcgtgacggcggcacccacctg
accggcctgcgcgccgcgatgacccgcgtcatcaacaaatacatcgaagaaaacgacttt
gccaagaaggccaaggttgaagtgaccggcgacgacatgcgcgaagggctgtgctgcgtg
ctgagcgtgaaggtgcccgagcccaagttcagcagccagaccaaggacaagctggtgtcg
agcgaagtgcgcgcgcccgtggaagacatcgtgggcaagctgctcaccgactacctgcaa
gagcgcccggccgacgccaagatcatctgcggcaagatcgtggaagccgcccgcgcccgc
gaagccgcccgcaaggcccgcgaaatgacgcgccgcaagggcgtgctcgacggcatgggc
ctgcccggcaaactggccgactgccaggaaaaagacccggcgctgtgcgagatctacatc
gtcgagggcgactccgccggcggctctgccaagcagggccgcgaccgcaagttccaggcc
atcctgccgctgcgcggcaagatcctgaacgtggagaaggcgcggtatgaaaagctgctg
accagcaatgaaatcctcacgctgatcaccgctttaggcaccggcattggcaaggccggc
gggagcaccggcaacgacgatttcgacgtgtccaagctgcgctaccaccgcatcatcatc
atgaccgatgccgacgtggacggcgcccacatccgcaccctgctgctcacgttcttctac
cgccagatgcccgagctggtggaacgcggccacatctacattgcccagccaccgctgtac
aaggtgaaggccggcaaggaagagctctacctgaaagacgcgcccgcgctcgacggcttt
ttgctgcgcattgcactgaaccacgccagcgtgttcaccggcaatgctggcgagcagacc
ctgagcggcgacaccctggccgagctggcgcgcaagcaccagattgccgagagcgtcatc
gcccgcctgggcaacttcatggacgccgaagcactgcggtccatcgccgacggcgtctcg
ctgaaactcgacaccgtggccgaagccgaagccagcgccgtgcagctccaggccaagctg
cgcgagctcaacaccaccggcgcccccgccgaagtggccggcgagtttgacgtgcgcacc
gacaagcccctgctgcgcatcagccgccgccaccacggcaacatcaagagcagcgtcatc
acgcaagacttcgtgcacggcgccgactacgccgccctggccgaagccgccgaaaccttc
cgcggcctgctgggcgaaggcgccaaggtgatgcgcggcgaaggcgaaaagcgcaaggaa
gaaaaagtgggcgacttccgccaggccatgaagtggcttatcagcgaagccgagcgctcc
acaagccgccagcgctacaaaggcctgggcgaaatgaaccccgagcagctgtgggaaacc
accatggaccccaacgtgcgccgcctgctgcgcgtgcagatcgacgacgccatcgaggcc
gatcgcgtgttcacgatgctgatgggcgatgaggtggagccgcgcagagatttcattgag
accaacgccttgcgggcggggaatattgacgtctga
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