Arthrobacter citreus: HPK19_18535
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Entry
HPK19_18535 CDS
T06606
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acit
Arthrobacter citreus
Pathway
acit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPK19_18535 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acit03021
]
HPK19_18535 (rpoB)
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_18535 (rpoB)
Enzymes [BR:
acit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPK19_18535 (rpoB)
Transcription machinery [BR:
acit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPK19_18535 (rpoB)
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPK19_18535 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QKE74631
LinkDB
All DBs
Position
3890836..3894369
Genome browser
AA seq
1177 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTASYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYVVEESKERDVNYAAPLRVKVRLLNKETGEVKEQDVFMGDFPLMT
DTGTFIINGAERVIVSQLVRSPSVYYSGKIDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRSLGFGTDQEILDLLGENEYLRNTLEKDNTDSTEKALLEIYERL
RPGEPPTVENAKNLLITRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRIAETLVDPETG
EIIVEKGTTLDRRTLDRIIPFLEKNIGEKIAHPAAGVLEEEITLQSIKIYAPVEGDGEQV
IQVIGNANVSKSVKNISPADIIASISYFFNLLHNVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNAVTPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNQF
GFIETPYRRVDPETGRLTDKIDYLTADEEDLYVVAQANARLGDDGSFLDEDVVARFRGDN
TVVKRERIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPESPIVGT
GMEYVSAKDSGAAVICKHPGIVERVEAKEVWVRRYSEVDGQKVKGDLDKYRMLKFVRSNQ
GTCYNQRPIVSVGDEVVRGEILADGPSMEKGELALGRNVLVAFMTWDGYNYEDAIIMSRR
LVKEDVYTSVHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDERGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFTRENGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPFLPDGTPVDIMLNPL
GVPSRMNIGQVLELHLGMAARYLGIHVASPVFDGAREEDVWGTIEEAGMARDAKTVLYDG
RSGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGM
DVKMMSATDQEIEMRDTEDDDDQASEHLAMDMEYVKE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatatggacgacaccgccaacgcagaagctatgctcgtatc
agtgaagttttagagttacctaacttaattgaaattcaaacagcatcttaccaatggttt
ttagatgaaggtttgagagaaatgttccaagacatttcaccgattgaggatttcacaggt
aatctatcattagaattcattgattacagtttaggtgagccgaagtatgttgtagaagaa
tcaaaagagcgtgacgtaaactacgctgctccacttcgtgtgaaagttcgcctattaaat
aaggaaactggcgaagttaaggagcaagacgttttcatgggtgatttcccattgatgaca
gacacaggtacattcattattaatggtgctgaacgtgtaatcgtttcacaattagttcgt
tcaccaagtgtgtactatagtgggaagatcgacaaaaatggtaaaaaaggttttactgct
acagttattcctaaccgtggtgcttggttagagtacgaaacggacgcgaaggatgtagtt
tatgtacgtattgaccgtacgagaaaattacctgtaacggtactactacgttcgcttggg
tttggtacagaccaagagattctagacttactaggcgagaatgaatacctacgtaatacg
cttgaaaaagataacacagatagcactgaaaaggcgcttcttgaaatctatgaaagatta
cgtccaggtgaaccacctacagtagaaaatgctaaaaacctattaattactcgcttcttt
gatccgaagcgttatgatttagctagcgttggacgctacaaaataaataaaaaattacac
attaaaaatagactgtttaaccaacgtattgcagaaacattagtggatccagagactggt
gaaattattgtggaaaaagggacaactcttgatcgtcgtactttagaccgcattattccg
ttcttagagaagaatatcggtgaaaaaattgctcaccctgctgctggcgtattagaagaa
gagattactctacaatctattaaaatttacgctccagttgaaggtgatggcgaacaagtt
attcaagtaatcggaaatgctaatgtaagtaaaagtgtgaaaaatatttcacctgctgac
attatcgcttctatttcttacttctttaacctgctacataacgtaggtgacactgacgat
attgaccatttaggaaatcgtcgtttacgttcagttggagaattacttcaaaaccaattc
cgtatcggtttatctcgtatggagcgtgtagttcgtgaacgtatgtcaattcaagataca
aatgcagttactccacaggcgttaattaatattcgccctgtaattgcttcaattaaagaa
ttctttggtagctcacagttatcacaattcatggaccaaacaaatcctcttgcagaatta
actcataaacgaagactatcagctttaggaccaggtggtttaacgcgtgagcgtgcaggc
tttgaagtacgtgacgttcattactctcactatggtcgtatgtgtccgattgaaacgcct
gagggaccgaatatcgggttaattaactcgctttcttcttatgcaaaggtaaatcaattt
ggatttattgaaactccatatcgtcgtgtagaccctgagacaggtcgtctaactgataaa
attgattacttaactgctgatgaagaggatctatacgttgtagcccaagcgaatgctcgt
ttaggtgatgacggaagcttcttagatgaagatgtagtagctcgtttccgtggagataac
acagttgttaaacgtgaacgtatcgactacatggatgtatctccaaaacaagtagtatca
gctgcgacagcatgtattcctttcttagagaatgatgactctaaccgtgccctaatggga
gcgaacatgcaacgtcaagcagttccattgttaaatcctgaatctccaatcgtaggtaca
ggtatggaatacgtatcagcaaaagactctggtgctgcagtaatctgtaaacatcctggt
attgttgaacgtgttgaagcgaaagaagtttgggtacgtcgttactcagaagtagatgga
caaaaagttaaaggtgaccttgataaataccgtatgttaaaattcgtacgttctaaccaa
ggtacttgttataaccaacgcccaatcgtaagtgtgggtgatgaagtagtaagaggcgaa
attcttgcagatggaccttcaatggaaaaaggtgaattagcactaggacgtaacgtatta
gtagcattcatgacatgggacggttacaactacgaggatgcgatcattatgagtcgccgt
cttgtaaaagaagatgtttacacttcagttcatattgaagaatatgaatcggaagctcgt
gatacaaaattaggacctgaagaaatcactcgtgatattcctaacgttggtgaagatgca
cttaaaaatcttgatgagcgcggaattatccgaattggtgcagaagtaaaagatggtgat
ttattagttggtaaagtaacacctaaaggggttactgagttaactgctgaagaacgtctt
ctacacgcaatcttcggtgaaaaagctcgtgaagttcgtgatacgtctttacgtgttcca
cacggtggaggcggaataattcttgatgtgaaagtattcactcgtgaaaacggtgatgaa
ttaccaccaggagtaaaccaacttgttcgtgtatatatcgttcagaaacgtaaaatctct
gaaggggataaaatggctggacgtcatggtaataaaggggttatctctcgtattttacca
gaagaagatatgccattcttacctgatggaacgccagttgatatcatgttaaacccatta
ggggtaccttctcgtatgaacatcggtcaagtattagagctacacttaggtatggctgca
agatatcttggcattcatgttgcttctcctgtatttgacggagcgcgtgaggaagatgtt
tggggaacaattgaagaagctggtatggcacgtgatgcaaaaactgtactttatgatgga
cgtagtggtgagcctttcgataaccgtgtttctgtaggtgtcatgtatatgattaaactt
gcgcacatggttgacgataagttacatgctcgttcaacaggaccttactcattagtaacg
caacaaccacttggtggtaaagcacaatttggtggacaacgttttggtgagatggaggtt
tgggcgcttgaagcatacggtgctgcatacacattacaagaaatcttaacagttaaatct
gatgacgttgttggacgtgtgaaaacatacgaagcaatcgttaagggtgaaaacgtacca
gaacctggtgtacctgaatcattcaaagtattaattaaagaattacagtcacttggtatg
gatgttaagatgatgtctgctacagatcaagaaatcgaaatgcgcgatactgaagatgat
gatgatcaagcttcagaacatttagcgatggatatggaatacgtaaaagaataa
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