KEGG   Arthrobacter citreus: HPK19_18540
Entry
HPK19_18540       CDS       T06606                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
acit  Arthrobacter citreus
Pathway
acit03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPK19_18540 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acit03021]
    HPK19_18540 (rpoC)
   03400 DNA repair and recombination proteins [BR:acit03400]
    HPK19_18540 (rpoC)
Enzymes [BR:acit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HPK19_18540 (rpoC)
Transcription machinery [BR:acit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HPK19_18540 (rpoC)
DNA repair and recombination proteins [BR:acit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HPK19_18540 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: QKE74632
LinkDB
Position
3894416..3898024
AA seq 1202 aa
MIDVNKFEYMKIGLASPDKIRSWSYGEIKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTEAGDTPLEKKQLLSEKEFRAYRERYGQTFQASMGAEAIKKLLS
DINLEKDVDSLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLQMYQCGLPKE
MAIELFKPFVMKELVERGLAHNIKSAKRKIERLHPEIWDVLESVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKDINEALIAYQNGYVHLHSRVAVA
ANSLNNETFTEEQNNSLLITTVGKLIFNEILPTSFPYINEPTQSNLEKETPQMYFVAKGA
NIKEIIESREEIAPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFRHSTKAGITVGV
SDIIVLPEKQLIIAEAQEKVDKVLKQFRRGLITEDERYDRVIAIWSDAKDVIQGKLMASL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRQDDCGTDRGLHVKAIKEGNEIIEGLY
DRLVGRHLRATIRHPETGELLAQENDLITEDLAREIIDAGIEEVNIRSAFTCNTSHGVCK
KCYGRNLATGAEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISEIDGIISISTDAKDKQEIIVQGTVESRNYPVPYGARLKVQEGEKIERG
QVMTEGSIDPKELLKVKGTNAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLKKVRVM
DAGETDLLPGTLLELHQFTEANKEALFAGKQPATARPLLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRRVDLVKDLNESVEINEEVLV
EK
NT seq 3609 nt   +upstreamnt  +downstreamnt
ttgatagatgtaaataaattcgagtatatgaagatcggacttgcatcgcctgacaaaatt
cgctcgtggtcatacggggaaattaaaaaacctgaaacaattaactaccgtacgttaaaa
ccagaaaaagatggacttttttgtgaacgtattttcggtccaacaaaagactgggaatgt
cattgcggtaagtacaaacgtgtacgttataaaggtgtagtttgtgatcgttgtggagtt
gaggttactcgtgcaaaagtacgtcgtgagcgtatgggtcacattgaattagctgcacca
gtttcacatatttggtatttcaaaggtattccaagccgaatgggacttgttttagacatg
tcccctcgtgctctggaagaagtaatctactttgcttcttacgtagtaactgaagcagga
gatactcctttagaaaagaaacaattgctttctgagaaagaattccgtgcttatcgtgag
cgctatggtcaaactttccaagcatctatgggtgcagaagcaattaaaaaattattaagc
gatattaaccttgaaaaagatgttgattctttaaaagaagagttaaaaactgctcaaggt
caacgtcgtacaagagcaattaaacgtttagaagtgttagaagcattccgtaactctggt
aatgagccatcttggatgatcttagatgtgctaccagtaattccacctgaattacgacca
atggttcaattagatggtggtcgttttgcaacatcagatctaaacgatttatatcgtcga
gtaattaaccgtaacaatcgtttaaaacgtttattagaccttggtgcacctagcatcatc
gtacaaaacgaaaaacgtatgcttcaagaagctgttgatgcgttaattgacaatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattaaaatctctttctcacatgctt
aaaggtaagcaaggacgtttccgtcaaaacttacttggtaaacgtgttgactactctggt
cgttcggttatcgttgtaggaccaaacttacagatgtaccaatgtggattaccaaaagaa
atggcgattgaattattcaagccattcgtgatgaaagaattagtagagcgaggattagca
cataacattaagtcagcgaaacgtaaaattgagcgtttacacccagaaatttgggatgta
ttagaatcagttattcgtgagcacccagtgttactgaaccgtgcccctactctacacaga
cttggtatccaagcgttcgaacctacattagtagaaggccgcgcaatccgtctacatcca
cttgtatgtactgcatacaacgccgatttcgatggtgaccaaatggctgttcacgtaccg
ttatcaagtgaagctcaagcagaggctcgtattctaatgcttgcagcacaaaacatcctg
aatccgaaagatggtaaaccagtagttacaccatctcaagatatggtattaggtaactat
tacttaactcttgagcgtgcaggcgctgtcggtgaaggtatggtatttaaagatattaat
gaagcgttaattgcataccaaaatggttatgtacatttacattctcgagttgctgttgcg
gctaattctttaaataacgaaacatttacagaagagcaaaataattcattattaatcaca
acggttggtaagctaatcttcaatgaaatcttacctacgtcgttcccgtatataaatgaa
cctactcaaagtaaccttgagaaggaaacacctcaaatgtatttcgttgctaaaggcgcg
aatattaaagagattattgaaagtagagaagaaattgctcctttcaaaaagaaaatactt
ggaaatatcatcgctgaagtatttaaacgtttcaaaattactgaaacatctaaaatgctt
gaccgcatgaaggatcttggatttagacactctacaaaagctggtattacagttggtgta
tccgatatcatcgtattacctgagaagcaattaattattgctgaagcgcaagaaaaagta
gataaagttctaaaacaattccgtcgtggtttaatcacagaagatgagcgttacgatcgt
gtaatcgcaatttggagtgatgcgaaggatgtaattcaagggaaactgatggcttcccta
aataaacgtaacccaatctttatgatgagtgactctggtgcccgtggtaatgcatcgaac
ttcactcagcttgcaggtatgcgtggtctgatggccaacccggctggacgtattatcgag
ttaccaatcaaatcttcattccgtgaaggtctaacggtacttgaatacttcatctcaaca
catggtgcgcgtaaaggtcttgccgatacagcacttaaaacagccgattcaggttactta
actcgtcgtcttgtagacgttgcacaagatgtaattgttcgtcaagatgattgtggtact
gaccgcggtttacatgtaaaggcgattaaagaaggtaatgaaattattgaaggattgtat
gatcgtctagttggtcgtcatttacgtgcaactatacgccacccagaaacaggtgaatta
cttgctcaagaaaacgatttaattactgaagacttagctcgtgaaattatcgatgcaggt
attgaagaagttaatatccgttctgcatttacatgtaatactagccatggagtatgtaaa
aaatgttatggtcgcaacttagctacaggtgctgaggttgaagttggtgaggcagttggt
attatcgctgcacaatcaatcggtgagccaggtacacagttaacgatgcgtacattccat
actggtggggtagcaggagacgatatcactcaaggtttacctcgtattcaagagctattt
gaagcgcgtaatcctaaaggtcaagcagttatttctgaaattgatggtattatttcaatt
tctactgatgctaaagacaaacaagaaattattgttcaaggcacagtagaatctagaaat
tacccagttccttatggtgctagactaaaagttcaagaaggtgaaaaaattgagcgtggt
caagtaatgactgaaggttcaattgatccgaaagaacttctaaaagtaaaaggtacaaat
gctgttcaagaatacttactacgtgaagtacaaaaagtataccgtatgcaaggggtagaa
attggagacaaacacgtagaggtaatggtacgtcaaatgctgaaaaaagttcgtgtaatg
gatgcgggtgaaactgatttattacctggtacattattagaactacatcagtttactgaa
gcgaataaagaagctttatttgcaggtaaacaaccggctactgcacgcccattattacta
ggtattacaaaagcatcattagaaacagactcattcctatctgctgcatcattccaagaa
acaacgcgtgtattaacagacgctgcgattaaagggaaacgagatgagttgctaggatta
aaagagaatgttattataggtaagttggttccagctggtactggtatgaacagataccgc
agagtagatcttgttaaagatttaaatgaatcagttgaaataaacgaagaagtgttagtt
gaaaaataa

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