Acidovorax sp. KKS102: C380_23880
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Entry
C380_23880 CDS
T02290
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ack03016
]
C380_23880 (trmE)
Transfer RNA biogenesis [BR:
ack03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
C380_23880 (trmE)
Prokaryotic type
Methyltransferases
C380_23880 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Arf
AIG1
Ras
RsgA_GTPase
ABC_tran
MCM
Roc
AAA_29
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AFU48468
LinkDB
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Position
complement(5191344..5192765)
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AA seq
473 aa
AA seq
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MLARHHDPIVAIATAPGRGAVGIVRVSGKGLAALVQALCGRTLKPREATYLPFRDVQGQA
IDQGLALYFPGPHSYTGEDVLELQAHGGPVVLQLLLARCLEAGAATDPATGQPCLPGLRV
AQPGEFTERAFLNDKIDLAQAEAIADLIDASTEAAARSASRSLTGAFSAEIHSLRDALIH
LRMLVEATLDFPEEEIDFLRKADAHGQLSNLQQTLASVMQRARQGALLREGIKVVIAGQP
NAGKSSLLNALAGAELAIVTPIAGTTRDKVQQTIQIEGVPLHIIDTAGLRDSSDEVERIG
IARAWDEIAGADAVLFLHDLSRQDAPEYVAADADIESALGQKLPKNIPVIDVWNKLDCAA
GEAAPARPERPAVHLSARTGQGLDGLRKLLLDVAGWQSAPEGIYIARARHVQALQAVSAH
LQEAADQLKAQGPALDLLAEELRLAQNALSAITGEFTSDDLLGVIFSSFCIGK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcccgccaccacgaccccatcgttgccatcgccactgcccccgggcgcggggcc
gtcggcatcgtgcgggtgtcgggcaaagggctggcggcgctggtgcaggcgctgtgcggc
cgcaccctcaagccgcgcgaggcgacgtacttgccctttcgggatgtacagggccaggcc
atcgaccaggggctggcgctgtacttccccggcccgcacagctacaccggtgaggatgtg
ctggagctgcaggcccacggcggccccgtggtgctgcagttgttgctggcgcgctgcctg
gaggcgggcgccgccaccgaccctgccacgggccagccctgcctgccgggcctgcgcgtg
gcccagcccggcgagttcaccgaacgcgctttcctgaacgacaagatcgacttggcccag
gccgaggcgattgccgacctgatcgacgccagcaccgaggccgcagcccgcagcgccagc
cgctcgctcaccggcgcgttctcggcagaaatccacagcctgcgcgacgcgctcatccac
ctgcgcatgctggtggaggccacgctcgattttcctgaagaagaaatcgacttcttgcgc
aaggccgatgcgcatggtcagctatcgaatctgcagcaaaccctggcctcggtgatgcag
cgcgcacgccagggcgccctgctgcgcgagggcatcaaagtggtgattgccgggcagccg
aatgcaggcaaaagctcgctgctcaatgcgctggcgggggccgagctggccatcgtcacg
cccatcgcgggcaccacgcgcgacaaggtgcagcagaccatccagatcgagggggtgccc
ctgcacatcatcgataccgccggcctgcgcgacagcagcgacgaggtcgagcgcatcggc
atcgcccgtgcctgggacgagattgccggagcggacgccgtgctgttcctgcacgacctg
tcacggcaggatgctcctgaatatgtagctgccgacgcagatatcgaaagcgccttgggg
caaaaactgcccaaaaacattcccgtgatcgatgtctggaacaagctggactgcgcggcg
ggtgaggccgccccagcccgccctgagcgcccggcggtacacctctcggcccgcaccggg
caaggtctggacgggttgcggaagctgctgctggatgtggcgggctggcagtcggcgccc
gagggcatctacattgcccgggcgcgccatgtgcaggcgctgcaggcggtgtctgcccac
ctgcaggaggccgccgaccagctgaaggcccagggcccggcgctggacttgctggccgag
gagctgcggctggcgcagaacgcgctgagcgccatcactggcgaattcacctccgatgac
ctgctgggcgtgatcttctccagcttctgtatcggtaaataa
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