Atta colombica: 108686983
Help
Entry
108686983 CDS
T11098
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
acoc Atta colombica
Pathway
acoc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108686983
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
acoc01007
]
108686983
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoc03016
]
108686983
Enzymes [BR:
acoc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
108686983
Amino acid related enzymes [BR:
acoc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108686983
Transfer RNA biogenesis [BR:
acoc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108686983
Prokaryotic type
108686983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
Arc1p_N_like
RHH_3
tRNA-synt_2b
Acyltransferase
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108686983
NCBI-ProteinID:
XP_018048006
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MLAMADETSRDTLLSRVKEQGELVRRLKAAKVDNTQEYREQSDINIELEGLNGDFADISY
VCGWCPTSKDVELFDMLRIILNDELARWPHLNRWHINMKSFSQEERLAFPAAEMPLTSLA
EKIERLKGINYISKNMLDKKIAEEIAKLLDLKAELGEENGCPHKLILKTPKGTRDYNPEQ
MALRLGVLEKIISVFKRHGAESIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGEILALRY
DLTVPFARYLAMSKISSIKRYHIAKVYRRDNPATTKGRYREFYQCDFDIAGQYDLMLPDV
ECIRVVCEALEALNLGPYLIKVNHRSLLDGIFAACDVPQSKFRNICSSVDKLDKSPWEEV
KKEMTDEKGLDEHIADKVGKYVSQSGGVELIAELRKDKELMKQSIAVQGLDSMELLLKYC
GIYKILDKIKFDLSLARGLDYYTGVIYEAILCGDDVGVGSVAGGGRYDNLVGMFDSKNKN
VPCVGVSVGVERIFSVMEAKLANKGLKTRTTEIEVFVASAQKNLHEERMKILVDLWNAGM
KAEQSYKKNAKLLAQLQHCEENGIPLAIIIGEGELAKGEVTLRVVSTREETRVPRSKLVD
EIRRQLKTS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgatggctgacgaaacatcgagggatacgttgctgagtcgcgtgaaggaacag
ggcgaattggtgcgacgattaaaggccgcaaaagttgataacacgcaggagtacagagag
cagtctgatataaacattgaattagaaggcttaaatggtgattttgcggatatcagctat
gtctgtggttggtgtccaacgtccaaggatgtcgaactgttcgacatgttgcgtatcatc
cttaatgatgagcttgcaaggtggccgcatctgaacagatggcatattaacatgaaaagc
tttagtcaggaagagcgtctagcgtttcctgctgcagaaatgccgcttacttctttggca
gaaaaaatcgagcgactaaagggtattaattatattagcaaaaatatgctagacaaaaag
atagcagaggaaattgccaagttgttggatctgaaagcagaattaggagaggaaaatggt
tgccctcataaactcatcctcaaaacgccaaaaggcacgagggattataatccggagcaa
atggcactgcgattgggagtgttggaaaaaataatatcagtattcaagcgtcatggcgct
gaatcgatagatacgcctgtattcgagttaaaagatgtcttaacaggtaaatatggtgaa
gactccaagcttatctatgatttgaaggatcaaggtggtgagatcctcgcacttagatac
gatttgacagttcctttcgcgaggtatctggctatgagcaagatttcttctattaaaaga
tatcacatcgccaaggtctaccgaagagataacccagccacaacgaaaggcagatacaga
gaattttatcaatgtgatttcgatatcgcaggccagtatgatctaatgctaccagacgtg
gaatgtattcgggttgtgtgtgaagcattggaagctctgaatctaggaccatatttaatt
aaggtgaatcatagatctttattggacggcatattcgccgcatgtgatgtgccacagagt
aaatttcgtaacatctgttcctctgtggataagctggacaaaagtccatgggaggaggta
aagaaagaaatgacggacgaaaagggattggatgaacatattgctgataaggtcggcaag
tatgtctcgcaatccggtggagtggaactgatagccgaattgagaaaagacaaagagctg
atgaaacagtctatagctgtgcaaggtttagactctatggaactgttgctaaagtactgc
ggcatctacaaaattctggacaaaattaagtttgatttaagtcttgcgagagggcttgat
tactacacgggtgttatttacgaagctatactgtgtggagacgatgtcggtgttggtagc
gtagcaggtggcggccgttatgataatttagtgggaatgttcgatagcaagaataaaaat
gtaccttgtgtcggtgtatcggtcggtgtggagcgaatattcagtgttatggaggcaaaa
ttggcgaacaagggcttaaaaacgcgtactactgagattgaggtgtttgtagccagcgca
caaaagaatctacatgaggagaggatgaagatattagtggatctgtggaatgccggcatg
aaggcagagcaatcttacaagaagaatgccaaactcttggcgcagctgcaacactgcgag
gagaacggcatcccgctggcaataatcatcggggaaggcgaattggcgaagggtgaagtt
acattgagagtcgtctcgacacgagaggagactcgcgtgccacgtagcaaactcgtcgac
gaaatacggagacagctaaaaacatcgtag
DBGET
integrated database retrieval system
