Atta colombica: 108689153
Help
Entry
108689153 CDS
T11098
Name
(RefSeq) transient receptor potential protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
acoc Atta colombica
Pathway
acoc04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
108689153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoc04040
]
108689153
Ion channels [BR:
acoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108689153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108689153
NCBI-ProteinID:
XP_018051288
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MDPSESQQDLLSNEMRPPSVQSLQTHNIDYILGPVEKHFLLSAERGDCATIKRLIEENQN
HPEILNINCVDPLNRSALIAAIENENIELIKLLLELGIEVKDALLHAIKEEYVEAVEILX
XXKQSFHIFFQSWEAADSSSNFTSDITPLILAAHKNNYEILKLLLDRGATLPTPHDARCG
CDECVMSSEQDSLRHSQSRINAYRALTSSSLIALSSRDPLLTAFELSWELRRLSRMEQEF
RAQYNEMREQTQQFATSLLDHARTSYELEVMLNYNPTGENWDPGERQTLXXYNILYNIFL
LKFVSHPNVQQLLAAIWYDGLPGFRRKNRIAQLMEVVKLGAMFPVYSIIYMIAPSSQMGS
FMKKPFVKFICHSASYAFFLMLLGMASQRIEYLLIELFGNEWMREILANWKKRERGCIPG
FVETGVVIYVISLIIGEIKALWTDGLIEYMSDLWNIVDFIQNTFYVIWISMRITAWWIVQ
REYWDGLDPWYPRDKWHAFDPMLLSEGAFAAGMIFSVNPHLGPLQISLGRMIIDIIKFFF
IYTLVLFAFGCGMNQLMWYYADLEKRKCYHVSDELPDFDNQEKACSIWRRFTNLFEASQS
LFWASFGMIDLMSFDLTGIKSFTRFWALLMFGSYSVINIIVLLNMLIAMMSNSYQIISER
SDTEWKFARSHLWMSYFEDGDTVPPPFNMIPTNKIFRKLFKCGGSNHSTKSFIKKSREKA
MIRHDTVVRLLIRRYVTAEQRKRDEFGITEDDVREIRQDISSFRYDLIDILRKNGMCTPM
LDKEETNIPGKKGKVMERRLQKDFQIGIVEGIVQAVIQSEKEPKDVFSQIARAIGRKGSG
VDKKDWNAVVRQSTIAMDPIGSTNEAMQRQTRRSLRRQLRHQPDSDLASMDPKRLLDYNP
NLSDFTPITRIAYAKFMLSKNKPDEQLNGGKTNDNETEEAPRKNSKVLIMETSTNVVPRP
AIETFKKSLLKSTNSSVNKQAGLIVKAEVKSPSPIPEDFVEEEISKQSISSATFNQEKKV
EETENVQEQQREENEVISERETLDEQKEEEKNEKETENDKRQQSKNIKENNSDNTGQKTR
EVDKEIDTKKYVESDITEKKFEIPVQTTKLQGKSKATGRVIGGWI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtcagagtctcagcaggatctactatctaacgaaatgagaccgccatcggtg
caatcattacagacacataatattgactatattcttggcccagttgagaaacatttcctg
cttagcgcagaacgaggtgattgtgccactatcaaaagattaattgaggaaaatcaaaat
cacccggagatattaaatatcaattgcgttgatccattaaatcgatcggcattgatagcc
gctattgaaaacgaaaacattgagcttataaagctgttgctcgaactgggaattgaagtg
aaggatgcacttttgcatgctattaaagaggagtatgtggaagcggtggaaatcctcnnn
nnnnagaaacaatcctttcatattttctttcagagttgggaagccgcagattcatcatcg
aactttacttctgatataactccattaattttagcagcccataaaaataattatgaaata
ctgaaactactcttagatcgtggcgcgactcttcccacacctcacgatgctaggtgtgga
tgtgatgaatgtgtcatgtccagcgaacaagattctctccgacactcgcagtctcgaata
aatgcgtaccgagcactcacttcgtcatctctaatcgcactttcatcgagagatccactt
ttgacagctttcgagctttcatgggaactgcgtcgtctcagcaggatggagcaagaattc
cgcgcccaatacaacgagatgcgagaacaaacacagcaatttgcaacctccttactagac
cacgcgcgtacatcttacgaattagaagtaatgttaaattacaatcctactggcgaaaat
tgggaccctggggagagacagactttannnnattataatatattatataatatatttttg
ttgaagttcgtctctcatccaaatgtgcaacaattattagctgctatttggtatgacggt
cttccgggattcagaaggaaaaatagaatagcacagttgatggaagttgtcaaacttgga
gcaatgtttccggtttacagtattatttatatgatagccccttcttcgcaaatgggatca
tttatgaagaaaccgttcgtcaaatttatatgtcattctgcatcatatgcttttttttta
atgctactcggtatggcatcgcaaagaattgaatacttactaatcgaattatttggaaac
gagtggatgcgagaaatacttgctaactggaaaaaacgggaacgtggctgcatcccgggt
tttgttgaaacaggcgtggtcatctatgtaataagtttaatcataggtgagattaaggct
ttatggacagatgggttaattgaatatatgtcagatttgtggaatattgtggatttcatt
caaaatacattttacgtaatctggataagtatgcgtattacggcttggtggatagtacag
agagaatattgggatggtttagatccttggtacccaagagataaatggcacgcattcgat
ccaatgctgctttcagaaggagcattcgcagccggaatgatatttagcgtgaatcctcat
cttggaccgctccagatttccctcgggaggatgataatagatattatcaagttctttttc
atctacactcttgtgctatttgcctttgggtgcggcatgaatcagttgatgtggtattat
gctgacttagaaaaaaggaaatgctatcacgtatccgacgaactgccagatttcgataat
caagagaaagcttgctctatatggagaagatttactaacttgtttgaggcatcacaatct
ctcttttgggcaagtttcggcatgattgatttaatgtcgttcgacttgacaggcattaag
agctttacacgattttgggcgctcctcatgtttggatcttattccgtgataaacatcatt
gtgctattgaatatgctgattgctatgatgtctaattcttatcaaatcatttcggaaaga
tctgatacagaatggaaatttgccaggagtcatttatggatgagttatttcgaggatgga
gatactgtaccaccgccatttaatatgattccaacaaataaaattttccgaaaactattc
aaatgtggaggcagcaatcattccacaaaatcttttataaaaaagtctcgggagaaagct
atgattagacatgacactgtagtgcgtctacttatacgtcgttatgtgacggctgaacaa
aggaaacgagatgagtttggtattacggaggatgatgtcagggaaattcgccaggacatt
tcgagttttcgatatgatctgatcgatatcctcaggaaaaatggaatgtgcacaccaatg
ctcgacaaagaagaaacaaatatacccggaaaaaaaggcaaagtgatggaacgccgactc
cagaaagatttccagataggtattgtggagggcatcgtgcaagcagttattcaaagcgaa
aaagagccaaaagacgtgttcagtcaaattgcaagggcgattggacggaaagggagcgga
gtcgataaaaaggactggaatgccgtagtaaggcaaagcaccatcgccatggatcctatc
ggaagtacaaatgaagcgatgcaacgtcaaacccgacgtagtttacgtcgccaattgcga
caccagccggattctgatctagcatccatggatccgaaacggctgctcgactataatccg
aatctctcggacttcactccaattactagaatagcctatgccaagtttatgctaagcaag
aacaaaccggatgagcagctcaacggtggtaaaacaaatgataatgaaactgaggaggct
cctcgaaaaaacagtaaagttttgataatggaaacttctacaaatgtggttccacgaccg
gccattgaaacatttaagaaaagtctattaaagtctacaaacagtagtgtgaacaaacaa
gcaggactcattgttaaagctgaagttaaatcaccatcacctatacccgaggattttgta
gaagaagaaataagcaagcaatcgatatcatctgctacgttcaatcaagagaaaaaagtc
gaagaaacagaaaatgtccaagagcaacagcgagaagaaaatgaagtaataagcgaaaga
gaaacattagatgagcaaaaggaagaagagaaaaatgaaaaagagacggaaaatgataag
cgtcaacagtcgaaaaatataaaggaaaataatagtgataacactggacagaagaccagg
gaagtagataaggaaattgatacgaaaaaatatgttgaatctgatataacagaaaagaaa
tttgaaataccagttcaaactacaaaattgcaaggaaagtcaaaagcgaccggtcgagta
ataggaggttggatttaa
DBGET
integrated database retrieval system
