Atta colombica: 108690747
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Entry
108690747 CDS
T11098
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
acoc Atta colombica
Pathway
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108690747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108690747
03012 Translation factors [BR:
acoc03012
]
108690747
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108690747
Translation factors [BR:
acoc03012
]
Eukaryotic type
Release factors
108690747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
108690747
NCBI-ProteinID:
XP_018053676
UniProt:
A0A195B3F9
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSNEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS
NIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAEVATQLYITNDKPNIAGLILAGSADFKTELSQSD
MFDPRLQAKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQETGK
YCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHTNAEEKVLHLTPEQEKDKTHFTDK
ESGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQ
SMQLDDIETDGFDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgaggagacctccgccgaccgcaacgtcgagatctggaaaatcaagaagctc
ataaagagtctcgagatggccagagggaatggcacgagtatgatttcgttaatcatacct
ccaaaggaccaaatatcgagagtgagcaagatgctggcggatgaattcggtacagcgtcg
aacattaagtcacgtgtaaatagattatctgttttgggtgcaatcacatcggtgcagcat
aggctaaagctatatacaaaagtgcctccaaatggcctggtaatttattgtggaactatt
gtaacagaagaaggaaaagaaaaaaaagtcaacatcgattttgagcctttcaaacctatc
aatacatctttatatctttgtgataataagtttcacacagaagcactcacggcattactc
gcagatgataacaaatttggttttattgtaatggatggtaatggagcgttatttggaacg
ctgcaaggtaacacccgcgaggtgttacataaattcaccgtagatcttcccaagaaacat
ggcagaggtggtcaatctgcattgcgttttgcccgattacgcatggaaaaacggcataat
tatgttcgaaaagtagctgaagtcgctactcaattatatatcacaaacgacaaacctaac
atcgctggattgatccttgcgggtagtgccgattttaaaacggaacttagtcaatccgat
atgttcgatccaagattgcaagctaaggttataaagctagttgatgtatcatatggtggc
gaaaatggttttaatcaagctattgaattagcggccgaatctttgcaaaatgtaaagttt
attcaagagaaaaaattaatcgggcgctactttgatgaaatttctcaagaaactggcaaa
tattgttttggtgtagaagatacgttgagagccttggaattgggtagcgtcgaaacttta
atttgttgggaaaatttagatattcaacgatatgtcctgaaaaatcatacgaacgctgaa
gaaaaagtactacacttaacgccagaacaagaaaaagataaaactcattttactgataag
gaaagtggggtagaattggaactcgtagaatgtcaaccactactggaatggcttgcaaat
aattataaaagttttggtgccactttggaaattatcacggacaaatctcaggaaggatcc
cagtttgttagaggttttggtggtataggaggtatcttgcggtacaaagtggactttcaa
agtatgcagctggacgacatcgagactgatggttttgatttggacgactactaa
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