Atta colombica: 108690988
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Entry
108690988 CDS
T11098
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
acoc Atta colombica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
108690988
NCBI-ProteinID:
XP_018054056
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MKWLGASSGGAGGEPASSMQLHHTSANGHIPTDTEQCGQVMAGGDNMRIQPGQTHQMGVS
RTQDDAMVGYVFQRPTEPEFNTQSSTFQAKQAPRAWALADDVIVDNNQEKWKYSMTKLSV
PQQSQSQQLGLTMNNVHLSNVPYEIHPMQLKSGAPGAEHLVYLNNQMTAQQQVALFHHQQ
QQQQQFRNGQIAPSTKKLWGVDEGGSKDEGGVKGGGTLLHLGDHPTTMWRDSTWSTTSDH
AVSQPISMGTGRRVGVGTGYHHQASEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKDL
EPRMVSLRLNTDADKKEKEKGSASPFDSTKDDAGPQGNGLASQNGLDDDKGFNRTPGSRQ
PSPGEEEFQKNAGPALVNNNVVLLKPGIDVVGNEEHFMAAFAPAPPHHLQHHQAPPTHHL
QHPHSHAAAQLFGAQAPPPPQGPPPSQQQQQQQGPPQPQETAPFDVGTLFRSQPQGATPQ
QLQLLQQQQQQQQQQYLAASQAQQQQQQQQQQNFPTAPYTVISGQEPYVGALIAGAPPPV
VPQYYGVGPWVYPAGLLPQAPPQAAAPPPPRRPLTPSSAAAAAAAAQDTANNLAQTVQGQ
YQVIPAYYDQNGSIVMGGVRGLSSAATPMRLVSPAPVLVNRAPSQPPPGPPAPPPPNLYS
QPTPTSHSNATPGECLGLAACSAAAVVAQAQAVAVQQAQQQGSGLAAGLAALGYGGSPLG
ALGSPAQLQNTGLGLGASSTGRRDSFDRNTSAFSPSLEYSRAKWPQSYGALDTGTWDRVY
LATNAGTPCKEYTDTGTVTASPSPLGLSLTPPPTLGGSLGGLVGGASRVSAAPGAEAKFR
ASAVPTLTANGVFGSSSSLFPNLVGKPGRGGAANINDKNSGGRSRLLEDFRNNRFPSLQL
RDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFF
EYGTQEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVK
DQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGIL
QELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKCV
THATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLG
SLRKYTYGKHIIVKLEKFFMKTASAMGVGATSAGTSTSSGGGDLGPIGPPASAASGPVST
SNQQSTQVL
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctcggcgcgagcagcggaggcgccggaggcgaaccggcatcctccatgcag
ctgcatcacacctccgccaacggccacatacccacggatacggaacagtgtgggcaagtt
atggctggtggcgataatatgcgaatccaacctggtcagactcatcaaatgggagtgagt
agaactcaagacgacgctatggttggttatgtgtttcaacgacctacagaaccagaattt
aacacccaatcttcgactttccaagcaaagcaagctccgagagcttgggcattggcagat
gacgttattgttgataataatcaagaaaaatggaaatattctatgactaagcttagtgta
cctcaacaaagtcaatctcaacaactgggattgactatgaacaatgtacatttgagtaat
gtaccttatgagatacatcctatgcaattaaaaagtggtgcgcctggtgcagaacatttg
gtctatctaaataatcagatgactgctcaacaacaagttgctctctttcatcaccaacag
cagcagcaacaacaattcaggaatggacagatcgctccctcaacaaaaaagctctggggc
gtggacgagggtggctccaaggacgaagggggtgtaaaaggcggtgggaccctacttcac
ctgggcgaccacccgaccaccatgtggcgggattccacctggagtacgacgtcagatcat
gcggtgtcacagccaatttcaatgggtacaggcagacgtgtgggagtcggaacgggatat
caccatcaagcatcagaagtcggaacagtgcttagtcctagaagcagcgaaacaggtggt
ttgggagttaaaatggttgaatatgttcttggatcgagtcccactacaccaaaagattta
gagccacgaatggtttctctaagattgaatactgatgcagacaagaaagaaaaagaaaaa
ggttcagcaagtccctttgatagcacaaaggatgatgctggaccacagggtaatggatta
gcgtctcaaaatggtttagacgacgacaaagggtttaaccgcacacctggaagtcgtcaa
ccgtcaccgggcgaagaagaatttcagaagaacgctggtcccgcattggtgaataataat
gttgttctgttaaaacctgggattgacgttgtcggcaatgaggaacatttcatggcagca
tttgctccagcaccaccgcatcatctgcagcatcatcaggcgccaccgactcatcatctg
caacatccgcattcacacgcagcagcgcaactcttcggagcgcaagctccgccgccgcca
caaggtccaccgccctcgcaacaacagcaacaacaacaaggtcctccgcaaccacaagaa
accgcaccctttgatgtcgggacactgttccgtagtcagccgcaaggtgcgacaccacaa
caattacaacttctacagcagcagcaacaacaacagcagcaacaatacctggccgcatcc
caagcgcagcaacaacaacaacagcagcagcaacaaaactttcctactgccccctatact
gttatcagtggacaggagccttacgtaggagcgctgatagctggtgcaccacctcctgta
gtaccgcaatactatggtgtcgggccctgggtctatccggctggattgctgccgcaggca
ccaccccaggcggccgcaccaccgccaccccgacgaccactcaccccctcttcggcagcg
gctgcggctgctgccgcgcaagacaccgccaacaatctggcacaaacggtacagggtcaa
tatcaggtgataccggcttactacgatcagaacggttccatcgtcatgggaggcgtgcgc
ggattaagttcggcagcgacccccatgagattagtcagccctgcaccagttctcgtaaac
agagctccgtctcaaccaccaccgggtccaccggcaccgccaccgccaaatttatattct
caaccaactccgacatcacacagcaacgctacgcctggcgaatgtctaggtctggcagcg
tgcagcgcagcggcagtggtcgcgcaagcccaggcagttgcggtgcaacaggcgcagcag
caaggttcaggacttgccgcaggtttagcggctctaggatatggcggctccccgctcgga
gcattgggctcgcctgcccaactacaaaacacaggtttaggcctcggtgcgtcttcaacc
ggcagacgtgattcctttgatagaaatacttcagccttcagtccaagcttggaatatagc
cgggcgaagtggcctcaaagttacggcgccctcgatacaggtacctgggacagagtgtat
ttagctacaaatgcaggtactccctgcaaagaatatacagacacaggtacagttactgcg
tcaccaagtcccttaggcttgtcattaacaccgccaccaactttaggaggatcattgggt
ggtcttgttggaggtgccagtcgagtatcagcggcccctggtgccgaagcgaagttccgc
gccagcgcggtacccaccctaacagccaacggagtgtttggctctagtagctctctgttt
cccaatctcgtaggcaagcctggtcgtggaggtgccgcgaacatcaacgacaaaaattct
ggaggacgatctcgcctactggaagattttcgaaataatcgattcccgagtcttcagtta
cgtgatttggctaatcacatagtagagttcagtcaagatcagcatggttcacgattcatt
caacagaaattggaacgggcctcagctagcgagaaacagcttgtattccaagagatcctt
tcctccgcatattctctcatgactgatgtcttcggaaattatgttatacagaagttcttt
gaatacggtacacaagaacagaaatcgactctcgcacaaaaggttcgaggacatgtttta
ccacttgcgctgcagatgtatggctgtagagtcatacagaaggcactcgagtcgatcgga
ccggaacagcagcaggaaatcgtacgagaactagatgggcatgtgttgaagtgtgttaag
gatcaaaacgggaatcacgttgtgcagaaatgcatcgagtgcgttgaaccccgagcattg
cagttcgtgataggagcctttgcgggacaggtatattctttgagtactcatccgtatggc
tgccgagtgatccagcgtatcctcgaacattgcaccgctgaacaaactcaaggaatttta
caagaattacacgctgccactgatcaattaattcaagatcaatatggcaattacgtcatt
caacatgtgcttgagcacggaaagccagaggacaaagcacaattaatcagcagcgttaga
ggtaaagtactcgctctttcccagcacaagtttgcgagtaacgtcgtcgaaaaatgcgtg
actcatgctacaaggcaggaacgcgctgtactgattgaagaagtttgcggtttcaatgac
aatgcactgaacgtgatgatgaaggatcaatatgccaattacgttgtccaaaagatgatt
gatgtcgcggaaccagcgcagcgcaaggtgctgatgcataagatccgaccgcatttggga
agtttacgcaaatacacctatggcaagcacatcattgttaaattggaaaagttcttcatg
aagaccgcttcagcgatgggagtaggagcgacatctgctggtacatcaacaagcagcgga
ggcggtgatctcggcccgatcggaccgcccgcatccgccgcgtctggtccagtctcgacg
tcgaaccaacaatcaacgcaggttttataa
DBGET
integrated database retrieval system