Aphelocoma coerulescens (scrub jay): 138098393
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Entry
138098393 CDS
T10543
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04140
Autophagy - animal
acoe04148
Efferocytosis
acoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138098393 (VPS11)
04148 Efferocytosis
138098393 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138098393 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138098393 (VPS11)
Membrane trafficking [BR:
acoe04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138098393 (VPS11)
Hops complex
138098393 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
138098393
NCBI-ProteinID:
XP_068851013
LinkDB
All DBs
Position
24:complement(239819..249976)
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AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVKEPSGPDGAASKPFALPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKERKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRHYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKV
LRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKIL
MHHVPNETTELLKILCTDYRPSGGNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQVKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HSFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
NCKEFIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDEQR
IQKYREETMRIRLEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKTATTIEAGLQRELLIHTKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcgccggttcgtcttctttgacagagagacggtgaaggag
ccgtcggggccggatggggccgcttcgaagcccttcgcgctgcccccgggcatcgcagtc
tgcgactcgggtcggggaagcctcgtgttcggagatatggaaggtcagatttggtttttg
cctcgctcccttcaactcagcagtttccaagcttacaagctaagggtcacacatctgtac
cagctgaagcagcacagtatcctggtttctgttggtgaggatgaagagggtatcaatcct
ttggtgaaagtctggaacctggagaaacgagatggtggtaatcctctttgcacacgaatt
tttccagcaataccaggtaacaagcccacggttgtatcctgcctaactgtccacgagaat
cttaatttcatggctatcggttttgcagatggaagcgttgtactcactaaaggagacatc
actcgagatcggcatagtaagacccagatcctacatgaaggcagttatccggttactggc
cttgcttttcgacagtctggaaaaacaacacatctgtttgtggtgaccactgagaacatc
cagtcttatatgctttcagtgaaagactatcctcacctggagctggacactcacggttgt
ggattgcgctgttcatctctcagtgacccctcccaggatctccagttcattgtggcagga
aacgaatgtgtgtacctttatcaaccagatgaacgtggcccctgctttgccttcgaggga
caaaagctgattgttcactggtatcgggggtacctcatcattgtctccaaggagcgaaag
acttccccaaagtcagaatttgctgggaatgaggcacagaattcagacaaacaagtcctg
aatatctatgacttgtgcaacaaattcattgcatacagctcaatctttgatgatatagtg
gatgtcttggcagagtggggttctttgtatgtactgaccagagatgggaagatccatgta
ctgcaggagaaggatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagcgatggtttgtcagagattttc
cggcactatggcgatcatctctataacaagggaaaccacgatggagccatccagcagtat
atccgaactatagggaagctagaaccatcttacgttattcggaaattcctggatgctcag
cgtatccacaacctcactgcttatctacagatgctccatctgcagtccctggccaatgca
gatcatactacacttctgctgaattgctataccaaactcaaagacagctccaaactggaa
gagttcattaagacaagtgagagtgaggtccactttgatgtggaaacggctatcaaggtg
cttcgccaagccggttactactcccacgccgtgtacctggcagagaagcatgagcatcat
gaatggtacctcaaaatccagttagaggacatcaagaactaccaagaggctttgcactac
attggaaaactgccctttgaacaggcagagagtaacatgaagcggtatggtaaaatcctg
atgcaccatgtccctaatgagaccactgaattgctgaagatcctttgcactgattaccgg
ccctcgggaggtaatgaaggccctgggatgctggaaggaaaaaaggctaattcagaggag
ttcatcccagtctttgcaaacaactcccgagaactgaaagcttttctggagcacatgact
gaggtgcaggctgactctccacagggtgtctatgacactttactggaacttcgattgcag
aactgggcacatgaacaagatgagcaggtcaaggagaagttgcacaatgaagccctcacc
ctcctgaagagcggaaggttcaaaacagtctttgataaggccttggtcttatgtcagatg
cacagtttcaaggatggtgttctgtacctctatgagcagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaggtgatcgaggtgtgtgagctgtat
ggagaccaagaggcttgtctctgggaacaggctcttggctactttgcgcggaaggaggag
aactgcaaagagtttattgctgcagtgctgaaacacattgagaacaagaatcttatgcct
ccactccttgttgtgcagacgctggctcataactccacagccaccctgtctgtgattaag
gattatcttgtcaacaagctgcagaagcaaagccgccagatagagcaggatgagcagaga
attcagaaatatcgagaagaaactatgaggatccgcctggaaattgaagagctaaaagca
agtcccaagatttttcagaagaccaagtgtagcatttgcaccagtgcattggagctgcct
tcagtccacttcctgtgcggtcattcctttcaccagcactgctttgaaagctactctgag
agtgattcggaatgtcctacttgcatgccagaaaatcgcaaggtgatggacatgatccga
gcccaggagcagaagagagatctgcacgaccagtttcagcatcagctcaagtgttcaaac
gatggcttctcagtcgttgctgactactttggtcgcggcgtcttcaataagctcacccta
atcacggacttgccctcgggaaagacagctacgaccatcgaggctggcctgcagcgggag
ctgctcatccacaccaagcgcagtacctga
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