Aphelocoma coerulescens (scrub jay): 138100058
Help
Entry
138100058 CDS
T10543
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138100058 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138100058 (HNRNPA1)
03041 Spliceosome [BR:
acoe03041
]
138100058 (HNRNPA1)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138100058 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
138100058 (HNRNPA1)
Spliceosome [BR:
acoe03041
]
Common components
Common spliceosomal components
hnRNP proteins
138100058 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
138100058
NCBI-ProteinID:
XP_068853846
LinkDB
All DBs
Position
29:complement(3024036..3033391)
Genome browser
AA seq
364 aa
AA seq
DB search
MAKAESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASAGQRGRSGSGNFGGGGGRGGFGGGDNFSRGGNFGGRGGFGRAGAYGGDGF
NGFGADGYGGGGGPGYSGGNRGYGGSGSYDGYNNGGGGFGGGSGGRRPARGPALAVRNGL
AEAGTGSNFGGGGSYNDFGSYNNQASSFGPMKGGSFGGRSSGPYGGGGYGSSSGGGSYGG
GRRF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccgagtccccgaaggagccggagcagctccggaaacttttcatcggcggc
ctcagctttgaaaccacagacgagagcctgcgcagccacttcgagcagtggggcaccctc
accgactgcgtggtgatgcgggaccccaacacgaagcgctcgcggggcttcgggttcgtc
acctactcctcggtcgaggaggtcgacgccgccatgaacgcgcggccacacaaggtggac
ggcagggtggtggaacccaaacgggccgtgtccagagaggactcgcagcggcccggcgcg
cacctgacggtgaagaagatcttcgtgggcggcatcaaggaggacacggaggagcatcac
ctgcgggactactttggccagtacggcaagatcgaggtcatcgagatcatgaccgaccgc
ggcagcggcaaaaagcgcggcttcgccttcgtcaccttcgacgaccacgactcggtcgac
aaaatcgtcatccagaagtaccacacggtgaacgggcacaactgcgaggtgcgcaaggcg
ctgtccaagcaggagatggccagcgcctcggccggccagcgaggccgcagcggctccggg
aacttcggcggcggcggcggccgcggcggcttcggcggcggtgacaacttcagccgcggc
ggcaacttcgggggccgtggtgggtttggccgcgccggcgcctacggcggcgacggattt
aatggatttggcgctgacggttacgggggcggcggcggccccggctactccgggggcaac
cggggctacggcggcagcggatcctacgacggctacaacaacggcggcggcggcttcggc
ggcggcagcgggggccggcggccggcacgggggccagcgctggccgtgcgcaacggcctg
gccgaggcgggcacaggcagcaatttcgggggtgggggcagctacaacgacttcggcagc
tacaacaaccaggcctcgagcttcgggcccatgaagggcggcagcttcggggggcgcagc
tcgggaccctacggcggcggcggctacggcagctccagcggcggcggcagctacggagga
gggaggaggttttaa
DBGET
integrated database retrieval system
